Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP04_F_G05
(930 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 35 0.072
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 33 0.22
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 33 0.22
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 33 0.22
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 27 0.29
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 31 1.2
AC006611-4|AAK85456.2| 328|Caenorhabditis elegans Hypothetical ... 31 1.2
U64857-7|AAC25861.2| 373|Caenorhabditis elegans Groundhog (hedg... 25 1.2
Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical pr... 27 1.5
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 30 2.7
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 30 2.7
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 30 2.7
Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical pr... 24 3.4
Z34533-1|CAA84302.3| 730|Caenorhabditis elegans Hypothetical pr... 29 3.6
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 29 3.6
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 29 3.6
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 29 3.6
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 24 4.0
Z74031-17|CAN86923.1| 380|Caenorhabditis elegans Hypothetical p... 24 7.3
Z74031-16|CAA98452.1| 378|Caenorhabditis elegans Hypothetical p... 24 7.3
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 28 8.3
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 28 8.3
U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical pr... 28 8.3
M93256-1|AAB59181.1| 1110|Caenorhabditis elegans tra-1 protein. 28 8.3
AL117202-5|CAB61040.2| 1109|Caenorhabditis elegans Hypothetical ... 28 8.3
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 28 8.3
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 35.1 bits (77), Expect = 0.072
Identities = 19/55 (34%), Positives = 19/55 (34%), Gaps = 3/55 (5%)
Frame = +1
Query: 406 PPPXXGGXXXXXXGGGX---PXXXFXXXXPPPXFXFSXFFXKXXXFXXPPPPPPP 561
PPP G G G P F PPP F PPPPPPP
Sbjct: 66 PPPVPNGFIPPPPGPGGIPPPPPMFAGGIPPPPPMMGGIPPPPPMFGAPPPPPPP 120
Score = 26.2 bits (55), Expect(2) = 0.39
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = +3
Query: 603 GGXPPPPPXXXXXPP 647
GG PPPPP PP
Sbjct: 92 GGIPPPPPMMGGIPP 106
Score = 25.0 bits (52), Expect(2) = 0.39
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = +3
Query: 579 FFXXXXGGGGXPPPPP 626
F G GG PPPPP
Sbjct: 73 FIPPPPGPGGIPPPPP 88
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 33.5 bits (73), Expect = 0.22
Identities = 15/40 (37%), Positives = 15/40 (37%)
Frame = -3
Query: 715 PPPPPPXXXXXXXXXXXXPXXXXGGXXXXXGGGGGXPPPP 596
PPPPPP P GG GG PPPP
Sbjct: 726 PPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPP 765
Score = 31.9 bits (69), Expect = 0.67
Identities = 18/52 (34%), Positives = 18/52 (34%)
Frame = +1
Query: 409 PPXXGGXXXXXXGGGXPXXXFXXXXPPPXFXFSXFFXKXXXFXXPPPPPPPP 564
PP GG GG P PPP PPPPPPPP
Sbjct: 720 PPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISG------GPPPPPPPP 765
Score = 31.5 bits (68), Expect = 0.89
Identities = 17/46 (36%), Positives = 17/46 (36%), Gaps = 5/46 (10%)
Frame = -3
Query: 718 PPPPPPPXXXXXXXXXXXXPXXXXGG-----XXXXXGGGGGXPPPP 596
PPPPPPP P GG GG G PPPP
Sbjct: 742 PPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPP 787
Score = 29.9 bits (64), Expect = 2.7
Identities = 18/52 (34%), Positives = 18/52 (34%)
Frame = +1
Query: 409 PPXXGGXXXXXXGGGXPXXXFXXXXPPPXFXFSXFFXKXXXFXXPPPPPPPP 564
PP GG GG P PPP PPPPPPPP
Sbjct: 736 PPITGGPPPPPPPGGLPPISGGPPPPPPP----------PGGCPPPPPPPPP 777
Score = 29.9 bits (64), Expect = 2.7
Identities = 18/53 (33%), Positives = 18/53 (33%)
Frame = +1
Query: 406 PPPXXGGXXXXXXGGGXPXXXFXXXXPPPXFXFSXFFXKXXXFXXPPPPPPPP 564
PPP G GG P PPP F PPPPPPP
Sbjct: 743 PPPPPPGGLPPISGGPPPPPPPPGGCPPPPPP-----PPPGGFKGGPPPPPPP 790
Score = 26.2 bits (55), Expect(2) = 3.0
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = +3
Query: 603 GGXPPPPPXXXXXPP 647
GG PPPPP PP
Sbjct: 756 GGPPPPPPPPGGCPP 770
Score = 21.8 bits (44), Expect(2) = 3.0
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +3
Query: 600 GGGXPPPPP 626
GG PPPPP
Sbjct: 740 GGPPPPPPP 748
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 33.5 bits (73), Expect = 0.22
Identities = 15/40 (37%), Positives = 15/40 (37%)
Frame = -3
Query: 715 PPPPPPXXXXXXXXXXXXPXXXXGGXXXXXGGGGGXPPPP 596
PPPPPP P GG GG PPPP
Sbjct: 726 PPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPP 765
Score = 31.9 bits (69), Expect = 0.67
Identities = 18/52 (34%), Positives = 18/52 (34%)
Frame = +1
Query: 409 PPXXGGXXXXXXGGGXPXXXFXXXXPPPXFXFSXFFXKXXXFXXPPPPPPPP 564
PP GG GG P PPP PPPPPPPP
Sbjct: 720 PPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISG------GPPPPPPPP 765
Score = 31.5 bits (68), Expect = 0.89
Identities = 17/46 (36%), Positives = 17/46 (36%), Gaps = 5/46 (10%)
Frame = -3
Query: 718 PPPPPPPXXXXXXXXXXXXPXXXXGG-----XXXXXGGGGGXPPPP 596
PPPPPPP P GG GG G PPPP
Sbjct: 742 PPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPP 787
Score = 29.9 bits (64), Expect = 2.7
Identities = 18/52 (34%), Positives = 18/52 (34%)
Frame = +1
Query: 409 PPXXGGXXXXXXGGGXPXXXFXXXXPPPXFXFSXFFXKXXXFXXPPPPPPPP 564
PP GG GG P PPP PPPPPPPP
Sbjct: 736 PPITGGPPPPPPPGGLPPISGGPPPPPPP----------PGGCPPPPPPPPP 777
Score = 29.9 bits (64), Expect = 2.7
Identities = 18/53 (33%), Positives = 18/53 (33%)
Frame = +1
Query: 406 PPPXXGGXXXXXXGGGXPXXXFXXXXPPPXFXFSXFFXKXXXFXXPPPPPPPP 564
PPP G GG P PPP F PPPPPPP
Sbjct: 743 PPPPPPGGLPPISGGPPPPPPPPGGCPPPPPP-----PPPGGFKGGPPPPPPP 790
Score = 26.2 bits (55), Expect(2) = 3.0
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = +3
Query: 603 GGXPPPPPXXXXXPP 647
GG PPPPP PP
Sbjct: 756 GGPPPPPPPPGGCPP 770
Score = 21.8 bits (44), Expect(2) = 3.0
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +3
Query: 600 GGGXPPPPP 626
GG PPPPP
Sbjct: 740 GGPPPPPPP 748
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 33.5 bits (73), Expect = 0.22
Identities = 15/40 (37%), Positives = 15/40 (37%)
Frame = -3
Query: 715 PPPPPPXXXXXXXXXXXXPXXXXGGXXXXXGGGGGXPPPP 596
PPPPPP P GG GG PPPP
Sbjct: 309 PPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPP 348
Score = 31.9 bits (69), Expect = 0.67
Identities = 18/52 (34%), Positives = 18/52 (34%)
Frame = +1
Query: 409 PPXXGGXXXXXXGGGXPXXXFXXXXPPPXFXFSXFFXKXXXFXXPPPPPPPP 564
PP GG GG P PPP PPPPPPPP
Sbjct: 303 PPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISG------GPPPPPPPP 348
Score = 31.5 bits (68), Expect = 0.89
Identities = 17/46 (36%), Positives = 17/46 (36%), Gaps = 5/46 (10%)
Frame = -3
Query: 718 PPPPPPPXXXXXXXXXXXXPXXXXGG-----XXXXXGGGGGXPPPP 596
PPPPPPP P GG GG G PPPP
Sbjct: 325 PPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPP 370
Score = 29.9 bits (64), Expect = 2.7
Identities = 18/52 (34%), Positives = 18/52 (34%)
Frame = +1
Query: 409 PPXXGGXXXXXXGGGXPXXXFXXXXPPPXFXFSXFFXKXXXFXXPPPPPPPP 564
PP GG GG P PPP PPPPPPPP
Sbjct: 319 PPITGGPPPPPPPGGLPPISGGPPPPPPP----------PGGCPPPPPPPPP 360
Score = 29.9 bits (64), Expect = 2.7
Identities = 18/53 (33%), Positives = 18/53 (33%)
Frame = +1
Query: 406 PPPXXGGXXXXXXGGGXPXXXFXXXXPPPXFXFSXFFXKXXXFXXPPPPPPPP 564
PPP G GG P PPP F PPPPPPP
Sbjct: 326 PPPPPPGGLPPISGGPPPPPPPPGGCPPPPPP-----PPPGGFKGGPPPPPPP 373
Score = 26.2 bits (55), Expect(2) = 3.1
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = +3
Query: 603 GGXPPPPPXXXXXPP 647
GG PPPPP PP
Sbjct: 339 GGPPPPPPPPGGCPP 353
Score = 21.8 bits (44), Expect(2) = 3.1
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +3
Query: 600 GGGXPPPPP 626
GG PPPPP
Sbjct: 323 GGPPPPPPP 331
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 26.6 bits (56), Expect(2) = 0.29
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +1
Query: 541 PPPPPPPP 564
PPPPPPPP
Sbjct: 576 PPPPPPPP 583
Score = 25.0 bits (52), Expect(2) = 0.29
Identities = 10/26 (38%), Positives = 10/26 (38%)
Frame = +1
Query: 484 PPPXFXFSXFFXKXXXFXXPPPPPPP 561
PPP PPPPPPP
Sbjct: 542 PPPPPIAGLLAANGTNVPIPPPPPPP 567
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 31.1 bits (67), Expect = 1.2
Identities = 17/41 (41%), Positives = 17/41 (41%)
Frame = +3
Query: 597 GGGGXPPPPPXXXXXPPXXXXGXXXXXXXXXXXXGGGGGGG 719
GGG PPPP PP G GGGGGGG
Sbjct: 106 GGGCAPPPP------PPACGGGCGGGGGGCGGGCGGGGGGG 140
Score = 29.1 bits (62), Expect = 4.7
Identities = 15/41 (36%), Positives = 15/41 (36%)
Frame = +3
Query: 597 GGGGXPPPPPXXXXXPPXXXXGXXXXXXXXXXXXGGGGGGG 719
GGG PPPPP G GG GGGG
Sbjct: 49 GGGCAPPPPPPACGGGCGGGGGGCGGGGGGCGGGGGCGGGG 89
>AC006611-4|AAK85456.2| 328|Caenorhabditis elegans Hypothetical
protein C30F8.3 protein.
Length = 328
Score = 31.1 bits (67), Expect = 1.2
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +1
Query: 484 PPPXFXFSXFFXKXXXFXXPPPPPPPP 564
PPP + F+ F PPPPPPPP
Sbjct: 59 PPPAYPFAP-----QVFTQPPPPPPPP 80
>U64857-7|AAC25861.2| 373|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 8 protein.
Length = 373
Score = 25.4 bits (53), Expect(2) = 1.2
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = +1
Query: 511 FFXKXXXFXXPPPPPPP 561
FF PPPPPPP
Sbjct: 223 FFVPVPVVIPPPPPPPP 239
Score = 24.2 bits (50), Expect(2) = 1.2
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = +1
Query: 544 PPPPPPPXXXXXF 582
PPPPPPP F
Sbjct: 232 PPPPPPPPGPNCF 244
>Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical
protein Y48E1B.1 protein.
Length = 497
Score = 26.6 bits (56), Expect(2) = 1.5
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +1
Query: 541 PPPPPPPP 564
PPPPPPPP
Sbjct: 361 PPPPPPPP 368
Score = 22.6 bits (46), Expect(2) = 1.5
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +1
Query: 532 FXXPPPPPP 558
F PPPPPP
Sbjct: 321 FILPPPPPP 329
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 29.9 bits (64), Expect = 2.7
Identities = 15/41 (36%), Positives = 15/41 (36%)
Frame = -3
Query: 718 PPPPPPPXXXXXXXXXXXXPXXXXGGXXXXXGGGGGXPPPP 596
PPPPPPP P G GG PPPP
Sbjct: 298 PPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGG-MPPPP 337
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 29.9 bits (64), Expect = 2.7
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +1
Query: 484 PPPXFXFSXFFXKXXXFXXPPPPPPPP 564
PPP F PPPPPPPP
Sbjct: 46 PPPPICPPQFCPPPPMCPPPPPPPPPP 72
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 29.9 bits (64), Expect = 2.7
Identities = 15/41 (36%), Positives = 15/41 (36%)
Frame = -3
Query: 718 PPPPPPPXXXXXXXXXXXXPXXXXGGXXXXXGGGGGXPPPP 596
PPPPPPP P G GG PPPP
Sbjct: 308 PPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGG-MPPPP 347
>Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical
protein C18D11.4 protein.
Length = 309
Score = 24.2 bits (50), Expect(2) = 3.4
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = -2
Query: 563 GGGGGGGGXXKXXXFXKK 510
GGGGGGGG + + ++
Sbjct: 53 GGGGGGGGRGRNQQYDRE 70
Score = 23.8 bits (49), Expect(2) = 3.4
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = -2
Query: 596 SXXXKKXKXXXGGGGGGGG 540
S + + GGGGGGGG
Sbjct: 39 SSRSRSPRARYGGGGGGGG 57
>Z34533-1|CAA84302.3| 730|Caenorhabditis elegans Hypothetical
protein B0285.1 protein.
Length = 730
Score = 29.5 bits (63), Expect = 3.6
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = +1
Query: 484 PPPXFXFSXFFXKXXXFXXPPPPPPPP 564
PPP F + F F PPPPP PP
Sbjct: 190 PPPSFNINPF---QPMFSQPPPPPLPP 213
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 29.5 bits (63), Expect = 3.6
Identities = 15/40 (37%), Positives = 15/40 (37%)
Frame = -3
Query: 718 PPPPPPPXXXXXXXXXXXXPXXXXGGXXXXXGGGGGXPPP 599
PPPPPPP P GG G G PPP
Sbjct: 297 PPPPPPPRGSPPTGSL---PPPQAGGSPPPAGTGSPPPPP 333
Score = 28.7 bits (61), Expect = 6.3
Identities = 13/40 (32%), Positives = 13/40 (32%)
Frame = -3
Query: 718 PPPPPPPXXXXXXXXXXXXPXXXXGGXXXXXGGGGGXPPP 599
PPPPPPP P G G PPP
Sbjct: 237 PPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPP 276
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 29.5 bits (63), Expect = 3.6
Identities = 15/40 (37%), Positives = 15/40 (37%)
Frame = -3
Query: 718 PPPPPPPXXXXXXXXXXXXPXXXXGGXXXXXGGGGGXPPP 599
PPPPPPP P GG G G PPP
Sbjct: 318 PPPPPPPRGSPPTGSL---PPPQAGGSPPPAGTGSPPPPP 354
Score = 28.7 bits (61), Expect = 6.3
Identities = 13/40 (32%), Positives = 13/40 (32%)
Frame = -3
Query: 718 PPPPPPPXXXXXXXXXXXXPXXXXGGXXXXXGGGGGXPPP 599
PPPPPPP P G G PPP
Sbjct: 258 PPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPP 297
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 29.5 bits (63), Expect = 3.6
Identities = 15/40 (37%), Positives = 15/40 (37%)
Frame = -3
Query: 718 PPPPPPPXXXXXXXXXXXXPXXXXGGXXXXXGGGGGXPPP 599
PPPPPPP P GG G G PPP
Sbjct: 303 PPPPPPPRGSPPTGSL---PPPQAGGSPPPAGTGSPPPPP 339
Score = 28.7 bits (61), Expect = 6.3
Identities = 13/40 (32%), Positives = 13/40 (32%)
Frame = -3
Query: 718 PPPPPPPXXXXXXXXXXXXPXXXXGGXXXXXGGGGGXPPP 599
PPPPPPP P G G PPP
Sbjct: 243 PPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPP 282
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 23.8 bits (49), Expect(2) = 4.0
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +1
Query: 541 PPPPPPP 561
PPPPPPP
Sbjct: 122 PPPPPPP 128
Score = 23.8 bits (49), Expect(2) = 4.0
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +1
Query: 544 PPPPPPP 564
PPPPPPP
Sbjct: 138 PPPPPPP 144
>Z74031-17|CAN86923.1| 380|Caenorhabditis elegans Hypothetical
protein F32D8.7b protein.
Length = 380
Score = 24.2 bits (50), Expect(2) = 7.3
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = +1
Query: 544 PPPPPPPXXXXXF 582
PPPPPPP F
Sbjct: 247 PPPPPPPPAPSPF 259
Score = 22.6 bits (46), Expect(2) = 7.3
Identities = 11/29 (37%), Positives = 13/29 (44%), Gaps = 2/29 (6%)
Frame = +1
Query: 484 PPPXFXFSXFFXKXXXFXXPPP--PPPPP 564
P P + F + PPP PPPPP
Sbjct: 223 PTPAPTLAPFRPRPTTRRLPPPTTPPPPP 251
>Z74031-16|CAA98452.1| 378|Caenorhabditis elegans Hypothetical
protein F32D8.7a protein.
Length = 378
Score = 24.2 bits (50), Expect(2) = 7.3
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = +1
Query: 544 PPPPPPPXXXXXF 582
PPPPPPP F
Sbjct: 245 PPPPPPPPAPSPF 257
Score = 22.6 bits (46), Expect(2) = 7.3
Identities = 11/29 (37%), Positives = 13/29 (44%), Gaps = 2/29 (6%)
Frame = +1
Query: 484 PPPXFXFSXFFXKXXXFXXPPP--PPPPP 564
P P + F + PPP PPPPP
Sbjct: 221 PTPAPTLAPFRPRPTTRRLPPPTTPPPPP 249
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 28.3 bits (60), Expect = 8.3
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +1
Query: 484 PPPXFXFSXFFXKXXXFXXPPPPPPPP 564
PPP F PPPPPPPP
Sbjct: 611 PPPPPPPQSFGMAPISSAAPPPPPPPP 637
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 28.3 bits (60), Expect = 8.3
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +1
Query: 484 PPPXFXFSXFFXKXXXFXXPPPPPPPP 564
PPP F PPPPPPPP
Sbjct: 437 PPPPPPPQSFGMAPISSAAPPPPPPPP 463
>U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical
protein F41F3.3 protein.
Length = 156
Score = 28.3 bits (60), Expect = 8.3
Identities = 15/41 (36%), Positives = 15/41 (36%)
Frame = -3
Query: 718 PPPPPPPXXXXXXXXXXXXPXXXXGGXXXXXGGGGGXPPPP 596
PPPPPP P GGGGG PPP
Sbjct: 31 PPPPPPSPCGCGGGGGLALPQLPPLSLPSL-GGGGGCCPPP 70
>M93256-1|AAB59181.1| 1110|Caenorhabditis elegans tra-1 protein.
Length = 1110
Score = 28.3 bits (60), Expect = 8.3
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +1
Query: 490 PXFXFSXFFXKXXXFXXPPPPPPPP 564
P FS +F + PPPPPPP
Sbjct: 1060 PTSSFSSWFPEDDPIYALPPPPPPP 1084
>AL117202-5|CAB61040.2| 1109|Caenorhabditis elegans Hypothetical
protein Y47D3A.6a protein.
Length = 1109
Score = 28.3 bits (60), Expect = 8.3
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +1
Query: 490 PXFXFSXFFXKXXXFXXPPPPPPPP 564
P FS +F + PPPPPPP
Sbjct: 1059 PTSSFSSWFPEDDPIYALPPPPPPP 1083
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 28.3 bits (60), Expect = 8.3
Identities = 17/55 (30%), Positives = 17/55 (30%)
Frame = -2
Query: 458 GXPPPXXXXKXPPXXXXXXXXXXXPLFWGGPPXXXGPPXXFXKXXXWXGXEQPPP 294
G PPP P P GGPP GPP F G P P
Sbjct: 1466 GGPPPPRGMNSPMRGMPPPMRGGGPPMRGGPPMRGGPP-MFRGGPPGPGRGMPSP 1519
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,046,851
Number of Sequences: 27780
Number of extensions: 268183
Number of successful extensions: 7145
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 627
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3659
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2391724104
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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