Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP04_F_G02
(1068 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 34 0.20
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 33 0.26
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 33 0.26
AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 33 0.46
Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr... 30 0.76
Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical pr... 30 0.77
Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical pr... 31 1.1
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 31 1.1
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 31 1.1
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 31 1.1
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 31 1.1
Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical pr... 31 1.4
U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical pr... 31 1.9
U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical pr... 31 1.9
Z81034-4|CAB02729.1| 541|Caenorhabditis elegans Hypothetical pr... 30 3.2
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 30 3.2
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 29 4.3
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 29 4.3
AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical... 29 4.3
AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein p... 29 4.3
Z19158-2|CAA79571.3| 262|Caenorhabditis elegans Hypothetical pr... 24 8.9
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical protein
B0280.13 protein.
Length = 616
Score = 33.9 bits (74), Expect = 0.20
Identities = 14/29 (48%), Positives = 14/29 (48%)
Frame = +3
Query: 954 KXPPPPPPXPXXXXXXFFFFXXXPPPPPP 1040
K PPPPPP P PPPPPP
Sbjct: 494 KSPPPPPPLPPIATPSSVPPPPPPPPPPP 522
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 33.5 bits (73), Expect = 0.26
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = +3
Query: 960 PPPPPPXPXXXXXXFFFFXXXPPPPPP 1040
PPPPPP P PPPPPP
Sbjct: 609 PPPPPPPPPQSFGMAPISSAAPPPPPP 635
Score = 33.1 bits (72), Expect = 0.35
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = +3
Query: 960 PPPPPPXPXXXXXXFFFFXXXPPPPPP 1040
PPPPPP P PPPPPP
Sbjct: 630 PPPPPPPPPMGLPAVGAGAPPPPPPPP 656
Score = 32.7 bits (71), Expect = 0.46
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = +3
Query: 960 PPPPPPXPXXXXXXFFFFXXXPPPPPP 1040
PPPPPP P PPPPPP
Sbjct: 631 PPPPPPPPMGLPAVGAGAPPPPPPPPP 657
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 33.5 bits (73), Expect = 0.26
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = +3
Query: 960 PPPPPPXPXXXXXXFFFFXXXPPPPPP 1040
PPPPPP P PPPPPP
Sbjct: 435 PPPPPPPPPQSFGMAPISSAAPPPPPP 461
Score = 33.1 bits (72), Expect = 0.35
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = +3
Query: 960 PPPPPPXPXXXXXXFFFFXXXPPPPPP 1040
PPPPPP P PPPPPP
Sbjct: 456 PPPPPPPPPMGLPAVGAGAPPPPPPPP 482
Score = 32.7 bits (71), Expect = 0.46
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = +3
Query: 960 PPPPPPXPXXXXXXFFFFXXXPPPPPP 1040
PPPPPP P PPPPPP
Sbjct: 457 PPPPPPPPMGLPAVGAGAPPPPPPPPP 483
>AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily
assigned gene nameprotein 268 protein.
Length = 881
Score = 32.7 bits (71), Expect = 0.46
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = +3
Query: 954 KXPPPPPPXPXXXXXXFFFFXXXPPPPPPXXXK 1052
K PPPPP P PPPPPP K
Sbjct: 64 KATPPPPPPPPPLISILQQAPPPPPPPPPPTLK 96
>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical protein
C33B4.3a protein.
Length = 1110
Score = 29.9 bits (64), Expect = 3.2
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = +3
Query: 960 PPPPPPXPXXXXXXFFFFXXXPPPPPP 1040
PPPPPP P PPPPPP
Sbjct: 794 PPPPPPLPPISSGA----PPPPPPPPP 816
Score = 27.9 bits (59), Expect(2) = 0.76
Identities = 13/32 (40%), Positives = 13/32 (40%), Gaps = 5/32 (15%)
Frame = +3
Query: 960 PPPPPPXPXXXXXXFFFFXXXPP-----PPPP 1040
PPPPPP P PP PPPP
Sbjct: 766 PPPPPPPPPHCEPTMVHVEFTPPSTSSVPPPP 797
Score = 22.6 bits (46), Expect(2) = 0.76
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +3
Query: 954 KXPPPPPP 977
K PPPPPP
Sbjct: 722 KTPPPPPP 729
>Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical protein
C33B4.3b protein.
Length = 993
Score = 29.9 bits (64), Expect = 3.2
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = +3
Query: 960 PPPPPPXPXXXXXXFFFFXXXPPPPPP 1040
PPPPPP P PPPPPP
Sbjct: 794 PPPPPPLPPISSGA----PPPPPPPPP 816
Score = 27.9 bits (59), Expect(2) = 0.77
Identities = 13/32 (40%), Positives = 13/32 (40%), Gaps = 5/32 (15%)
Frame = +3
Query: 960 PPPPPPXPXXXXXXFFFFXXXPP-----PPPP 1040
PPPPPP P PP PPPP
Sbjct: 766 PPPPPPPPPHCEPTMVHVEFTPPSTSSVPPPP 797
Score = 22.6 bits (46), Expect(2) = 0.77
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +3
Query: 954 KXPPPPPP 977
K PPPPPP
Sbjct: 722 KTPPPPPP 729
>Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical protein
C31C9.6 protein.
Length = 965
Score = 31.5 bits (68), Expect = 1.1
Identities = 14/29 (48%), Positives = 14/29 (48%)
Frame = +3
Query: 954 KXPPPPPPXPXXXXXXFFFFXXXPPPPPP 1040
K PPPPPP P PPPPPP
Sbjct: 487 KSPPPPPPLPPIATPS----SVPPPPPPP 511
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 31.5 bits (68), Expect = 1.1
Identities = 14/27 (51%), Positives = 14/27 (51%)
Frame = +3
Query: 960 PPPPPPXPXXXXXXFFFFXXXPPPPPP 1040
PPPPPP P F PPPPPP
Sbjct: 769 PPPPPPPPPGG-----FKGGPPPPPPP 790
Score = 29.5 bits (63), Expect = 4.3
Identities = 14/31 (45%), Positives = 14/31 (45%)
Frame = +3
Query: 960 PPPPPPXPXXXXXXFFFFXXXPPPPPPXXXK 1052
PPPPPP P PPPPPP K
Sbjct: 758 PPPPPPPPGGC-------PPPPPPPPPGGFK 781
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 31.5 bits (68), Expect = 1.1
Identities = 14/27 (51%), Positives = 14/27 (51%)
Frame = +3
Query: 960 PPPPPPXPXXXXXXFFFFXXXPPPPPP 1040
PPPPPP P F PPPPPP
Sbjct: 769 PPPPPPPPPGG-----FKGGPPPPPPP 790
Score = 29.5 bits (63), Expect = 4.3
Identities = 14/31 (45%), Positives = 14/31 (45%)
Frame = +3
Query: 960 PPPPPPXPXXXXXXFFFFXXXPPPPPPXXXK 1052
PPPPPP P PPPPPP K
Sbjct: 758 PPPPPPPPGGC-------PPPPPPPPPGGFK 781
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 31.5 bits (68), Expect = 1.1
Identities = 14/27 (51%), Positives = 14/27 (51%)
Frame = +3
Query: 960 PPPPPPXPXXXXXXFFFFXXXPPPPPP 1040
PPPPPP P F PPPPPP
Sbjct: 352 PPPPPPPPPGG-----FKGGPPPPPPP 373
Score = 29.5 bits (63), Expect = 4.3
Identities = 14/31 (45%), Positives = 14/31 (45%)
Frame = +3
Query: 960 PPPPPPXPXXXXXXFFFFXXXPPPPPPXXXK 1052
PPPPPP P PPPPPP K
Sbjct: 341 PPPPPPPPGGC-------PPPPPPPPPGGFK 364
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 31.5 bits (68), Expect = 1.1
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = +3
Query: 960 PPPPPPXPXXXXXXFFFFXXXPPPPPPXXXKK 1055
PPPPPP P PPPPPP K
Sbjct: 1338 PPPPPPPPPPPSDD--LTPVPPPPPPPPTMSK 1367
>Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical protein
ZC168.5 protein.
Length = 172
Score = 31.1 bits (67), Expect = 1.4
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = +3
Query: 960 PPPPPPXPXXXXXXFFFFXXXPPPPPP 1040
PPPPPP P + PPPPPP
Sbjct: 39 PPPPPPPPCGGG-----YEAPPPPPPP 60
>U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical protein
R144.4a protein.
Length = 360
Score = 30.7 bits (66), Expect = 1.9
Identities = 14/31 (45%), Positives = 14/31 (45%)
Frame = +3
Query: 960 PPPPPPXPXXXXXXFFFFXXXPPPPPPXXXK 1052
PPPPPP P PPPPPP K
Sbjct: 155 PPPPPPPPPVSVPS---SKPTPPPPPPAQQK 182
>U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical protein
R144.4b protein.
Length = 362
Score = 30.7 bits (66), Expect = 1.9
Identities = 14/31 (45%), Positives = 14/31 (45%)
Frame = +3
Query: 960 PPPPPPXPXXXXXXFFFFXXXPPPPPPXXXK 1052
PPPPPP P PPPPPP K
Sbjct: 155 PPPPPPPPPVSVPS---SKPTPPPPPPAQQK 182
>Z81034-4|CAB02729.1| 541|Caenorhabditis elegans Hypothetical protein
C15C6.3 protein.
Length = 541
Score = 29.9 bits (64), Expect = 3.2
Identities = 14/34 (41%), Positives = 16/34 (47%)
Frame = +3
Query: 960 PPPPPPXPXXXXXXFFFFXXXPPPPPPXXXKKKK 1061
PPPPPP P F PPPPP ++ K
Sbjct: 476 PPPPPPPPPENEPEEF-----PPPPPSISIRETK 504
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 29.9 bits (64), Expect = 3.2
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = +3
Query: 960 PPPPPPXPXXXXXXFFFFXXXPPPPPP 1040
PPPPPP P PPPPPP
Sbjct: 562 PPPPPPLPQNLSGA----PPPPPPPPP 584
Score = 29.5 bits (63), Expect = 4.3
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = +3
Query: 960 PPPPPPXPXXXXXXFFFFXXXPPPPPP 1040
PPPPPP P PPPPPP
Sbjct: 576 PPPPPPPPP-------MLGGPPPPPPP 595
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical protein
T24B8.4 protein.
Length = 866
Score = 29.5 bits (63), Expect = 4.3
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +3
Query: 963 PPPPPXPXXXXXXFFFFXXXPPPPPP 1040
PPPPP F PPPPPP
Sbjct: 95 PPPPPMMGGIPPPPPMFGAPPPPPPP 120
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical protein
C08B11.5 protein.
Length = 388
Score = 29.5 bits (63), Expect = 4.3
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +3
Query: 960 PPPPPPXPXXXXXXFFFFXXXPPPPP 1037
PPPPPP P PPPPP
Sbjct: 297 PPPPPPPPGRTPGPPGMPGMPPPPPP 322
Score = 29.5 bits (63), Expect = 4.3
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +3
Query: 963 PPPPPXPXXXXXXFFFFXXXPPPPPP 1040
PPPPP P PPPPPP
Sbjct: 297 PPPPPPPPGRTPGPPGMPGMPPPPPP 322
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA binding
protein protein.
Length = 398
Score = 29.5 bits (63), Expect = 4.3
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +3
Query: 960 PPPPPPXPXXXXXXFFFFXXXPPPPP 1037
PPPPPP P PPPPP
Sbjct: 307 PPPPPPPPGRTPGPPGMPGMPPPPPP 332
Score = 29.5 bits (63), Expect = 4.3
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +3
Query: 963 PPPPPXPXXXXXXFFFFXXXPPPPPP 1040
PPPPP P PPPPPP
Sbjct: 307 PPPPPPPPGRTPGPPGMPGMPPPPPP 332
>AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical
protein Y116A8C.32 protein.
Length = 699
Score = 29.5 bits (63), Expect = 4.3
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +3
Query: 960 PPPPPPXPXXXXXXFFFFXXXPPPP 1034
PPPPPP P PPPP
Sbjct: 674 PPPPPPPPMPGDLSSLLAAAPPPPP 698
Score = 29.5 bits (63), Expect = 4.3
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +3
Query: 963 PPPPPXPXXXXXXFFFFXXXPPPPP 1037
PPPPP P PPPPP
Sbjct: 674 PPPPPPPPMPGDLSSLLAAAPPPPP 698
>AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein
protein.
Length = 699
Score = 29.5 bits (63), Expect = 4.3
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +3
Query: 960 PPPPPPXPXXXXXXFFFFXXXPPPP 1034
PPPPPP P PPPP
Sbjct: 674 PPPPPPPPMPGDLSSLLAAAPPPPP 698
Score = 29.5 bits (63), Expect = 4.3
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +3
Query: 963 PPPPPXPXXXXXXFFFFXXXPPPPP 1037
PPPPP P PPPPP
Sbjct: 674 PPPPPPPPMPGDLSSLLAAAPPPPP 698
>Z19158-2|CAA79571.3| 262|Caenorhabditis elegans Hypothetical protein
T23G5.3 protein.
Length = 262
Score = 24.2 bits (50), Expect(2) = 8.9
Identities = 12/34 (35%), Positives = 12/34 (35%)
Frame = +3
Query: 960 PPPPPPXPXXXXXXFFFFXXXPPPPPPXXXKKKK 1061
PPPPPP P P PP KK
Sbjct: 141 PPPPPPPPLPSLMQPKDTVQIPMRKPPTGRNSKK 174
Score = 22.6 bits (46), Expect(2) = 8.9
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +3
Query: 954 KXPPPPPP 977
K PPPPPP
Sbjct: 140 KPPPPPPP 147
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,432,126
Number of Sequences: 27780
Number of extensions: 204675
Number of successful extensions: 2372
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 568
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1689
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2856190974
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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