Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP04_F_F23
(880 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_01_0093 + 702223-702348,703434-703556,703646-703702,703797-70... 161 5e-40
07_03_1141 - 24264534-24264635,24265542-24265616,24265709-242657... 151 7e-37
03_06_0030 + 31161821-31161927,31163700-31163934,31164064-311648... 144 1e-34
12_02_0477 + 19503678-19503803,19504381-19504422,19504631-195046... 104 6e-33
04_03_0804 - 19844059-19844777,19844914-19844995,19846580-19846585 33 0.40
03_01_0578 + 4270835-4271482,4271763-4272140,4272353-4272444,427... 32 0.53
02_05_0250 + 27153048-27154453,27154546-27154885 31 0.92
04_01_0576 + 7466032-7466802,7468382-7468444,7469043-7469122,746... 31 1.2
12_01_1024 - 10467644-10469274,10469424-10469482,10469820-104703... 31 1.6
01_06_1303 - 36132588-36132710,36133879-36134103,36134318-361347... 29 3.7
08_02_0861 - 21974524-21975224,21975307-21975467,21975563-21976695 29 4.9
11_06_0437 - 23533218-23536382 29 6.5
03_02_0360 - 7796799-7796816,7797477-7797587,7797760-7798068 29 6.5
03_05_1012 + 29670310-29670512,29670856-29671001,29671169-296712... 28 8.6
>07_01_0093 +
702223-702348,703434-703556,703646-703702,703797-703871,
704105-704212
Length = 162
Score = 161 bits (392), Expect = 5e-40
Identities = 70/105 (66%), Positives = 86/105 (81%), Gaps = 1/105 (0%)
Frame = +3
Query: 114 MGDIEDTHFET-GDSGASATFPMQCSALRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVH 290
M D E+ HFE+ D+GAS T+P Q +RKNG++++K RPCK+VE+STSKTGKHGHAK H
Sbjct: 1 MSDSEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCH 60
Query: 291 LVGIDIFNGKKYEDICPSTHNMDVPHVKREDYQLTDISDDGYLTL 425
VGIDIFNGKK EDI PS+HN DVPHV R DYQL DIS+DG+++L
Sbjct: 61 FVGIDIFNGKKLEDIVPSSHNCDVPHVDRTDYQLIDISEDGFVSL 105
Score = 40.7 bits (91), Expect = 0.002
Identities = 18/51 (35%), Positives = 35/51 (68%), Gaps = 2/51 (3%)
Frame = +1
Query: 427 MADNGDLREDLKIPDGD-LGTQLRTDF-DSGKELLCTVLKSCGEECVIAVK 573
+ ++G+ ++DL++P D L Q++ F + GK+++ TV+ + GEE + AVK
Sbjct: 106 LTESGNTKDDLRLPTDDTLTNQIKNGFGEEGKDMILTVMSAMGEEQICAVK 156
>07_03_1141 -
24264534-24264635,24265542-24265616,24265709-24265765,
24265903-24266025,24266509-24266520,24267014-24267157,
24267606-24267626
Length = 177
Score = 151 bits (366), Expect = 7e-37
Identities = 68/109 (62%), Positives = 85/109 (77%), Gaps = 5/109 (4%)
Frame = +3
Query: 114 MGDIEDTHFET-GDSGASATFPMQCSALRKNGFVMLKGRPCK----IVEMSTSKTGKHGH 278
M D E+ HFE+ D+GAS T+P Q +RKNG++++K RPCK +VE+STSKTGKHGH
Sbjct: 14 MSDSEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKNRPCKGFGKVVEVSTSKTGKHGH 73
Query: 279 AKVHLVGIDIFNGKKYEDICPSTHNMDVPHVKREDYQLTDISDDGYLTL 425
AK H V IDIFNGKK EDI PS+HN DVPHV R +YQL DIS+DG+++L
Sbjct: 74 AKCHFVAIDIFNGKKLEDIVPSSHNCDVPHVNRTEYQLIDISEDGFVSL 122
Score = 44.0 bits (99), Expect = 2e-04
Identities = 19/50 (38%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
Frame = +1
Query: 427 MADNGDLREDLKIP-DGDLGTQLRTDFDSGKELLCTVLKSCGEECVIAVK 573
+ ++G+ ++DL++P D L Q++T F GK+L+ TV+ + GEE + A+K
Sbjct: 123 LTESGNTKDDLRLPTDDSLLGQIKTGFGEGKDLVVTVMSAMGEEQICALK 172
>03_06_0030 + 31161821-31161927,31163700-31163934,31164064-31164826,
31165816-31167650,31169294-31169424,31169993-31170075,
31170426-31170680,31171125-31171220,31171695-31171775,
31171811-31171968,31172434-31172534,31172614-31172629,
31173390-31173439,31174558-31174588,31175156-31175305,
31176135-31176173,31176288-31176410,31176496-31176552,
31176837-31176911,31177003-31177107
Length = 1496
Score = 144 bits (348), Expect = 1e-34
Identities = 69/118 (58%), Positives = 84/118 (71%), Gaps = 14/118 (11%)
Frame = +3
Query: 114 MGDIEDTHFET-GDSGASATFPMQCSALRKNGFVMLKGRPCK-------------IVEMS 251
M D E+ HFE+ D+GAS T+P Q +RKNG +++K RPCK +VE+S
Sbjct: 1323 MSDSEEHHFESKADAGASKTYPQQAGTIRKNGHIVIKNRPCKWSGNHASLLVDTKVVEVS 1382
Query: 252 TSKTGKHGHAKVHLVGIDIFNGKKYEDICPSTHNMDVPHVKREDYQLTDISDDGYLTL 425
TSKTGKHGHAK H V IDIFNGKK EDI PS+HN DVPHV R DYQL DIS+DG+++L
Sbjct: 1383 TSKTGKHGHAKCHFVAIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSL 1440
Score = 42.3 bits (95), Expect = 5e-04
Identities = 19/50 (38%), Positives = 34/50 (68%), Gaps = 1/50 (2%)
Frame = +1
Query: 427 MADNGDLREDLKIP-DGDLGTQLRTDFDSGKELLCTVLKSCGEECVIAVK 573
+ ++G ++DL++P D L TQ++ F GK+L+ TV+ + GEE + A+K
Sbjct: 1441 LTESGGTKDDLRLPSDEALLTQIKDGFAEGKDLIVTVMSAMGEEQICALK 1490
>12_02_0477 +
19503678-19503803,19504381-19504422,19504631-19504684,
19504946-19505068,19505154-19505210,19505299-19505373,
19505925-19506026
Length = 192
Score = 104 bits (249), Expect(2) = 6e-33
Identities = 45/64 (70%), Positives = 53/64 (82%)
Frame = +3
Query: 234 KIVEMSTSKTGKHGHAKVHLVGIDIFNGKKYEDICPSTHNMDVPHVKREDYQLTDISDDG 413
K+VE+STSKTGKHGHAK H V IDIF KK EDI PS+HN DVPHV R +YQL DIS+DG
Sbjct: 74 KVVEVSTSKTGKHGHAKCHFVAIDIFTAKKLEDIVPSSHNCDVPHVNRTEYQLIDISEDG 133
Query: 414 YLTL 425
+++L
Sbjct: 134 FVSL 137
Score = 55.2 bits (127), Expect(2) = 6e-33
Identities = 22/42 (52%), Positives = 31/42 (73%), Gaps = 1/42 (2%)
Frame = +3
Query: 114 MGDIEDTHFET-GDSGASATFPMQCSALRKNGFVMLKGRPCK 236
M D E+ HFE+ D+GAS T+P Q +RKNG++++K RPCK
Sbjct: 1 MSDSEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKNRPCK 42
Score = 45.2 bits (102), Expect = 7e-05
Identities = 19/50 (38%), Positives = 36/50 (72%), Gaps = 1/50 (2%)
Frame = +1
Query: 427 MADNGDLREDLKIP-DGDLGTQLRTDFDSGKELLCTVLKSCGEECVIAVK 573
+ +NG+ ++DL++P D +L +Q++ F GK+L+ TV+ + GEE + A+K
Sbjct: 138 LTENGNTKDDLRLPTDDNLLSQIKDGFGEGKDLVVTVMSAMGEEQICALK 187
>04_03_0804 - 19844059-19844777,19844914-19844995,19846580-19846585
Length = 268
Score = 32.7 bits (71), Expect = 0.40
Identities = 15/38 (39%), Positives = 17/38 (44%)
Frame = +1
Query: 154 PGPQPPSPCNVRPCVKTVSLC*RVVHARLLKCPHPKPE 267
P PQPP PC PC K C + C PKP+
Sbjct: 81 PLPQPPPPCKPPPCEKPPEDC-KPKPCHCCSCEKPKPK 117
>03_01_0578 +
4270835-4271482,4271763-4272140,4272353-4272444,
4272637-4273240
Length = 573
Score = 32.3 bits (70), Expect = 0.53
Identities = 19/69 (27%), Positives = 31/69 (44%)
Frame = +1
Query: 127 KTHTSRPETPGPQPPSPCNVRPCVKTVSLC*RVVHARLLKCPHPKPESTATLKFTWLGLI 306
K + + P TP P PP P P ++ + P K T T+ +W L
Sbjct: 277 KLYKTSPPTPTPTPPPPAMTSPPKLNLAAKPNGTSGTVTSTPTVKRRVTETV--SWDSLP 334
Query: 307 SSMVKSMKI 333
+S++KS+K+
Sbjct: 335 TSLIKSVKV 343
>02_05_0250 + 27153048-27154453,27154546-27154885
Length = 581
Score = 31.5 bits (68), Expect = 0.92
Identities = 20/52 (38%), Positives = 25/52 (48%)
Frame = +1
Query: 430 ADNGDLREDLKIPDGDLGTQLRTDFDSGKELLCTVLKSCGEECVIAVKANTA 585
A GD DL IPD + TQ+ T+ S C V S G C AV A+ +
Sbjct: 248 ASTGDRSVDLPIPDNETNTQI-TEMRSNGAEKCDVQLSGGTLCSEAVPASNS 298
>04_01_0576 +
7466032-7466802,7468382-7468444,7469043-7469122,
7469505-7469622,7470035-7470067,7470400-7470474,
7470887-7471043,7471142-7471230,7472041-7472294,
7472977-7473148,7473250-7473333,7473626-7473730,
7474055-7474363,7474622-7474756,7476236-7476317,
7476423-7476502,7476622-7476783,7477071-7477138,
7478422-7478502,7478634-7478760,7478816-7478879,
7480808-7480854,7481042-7481335
Length = 1149
Score = 31.1 bits (67), Expect = 1.2
Identities = 12/33 (36%), Positives = 16/33 (48%)
Frame = +1
Query: 88 PVVRFKTQQWVTSKTHTSRPETPGPQPPSPCNV 186
P + W+T T P+ P P PP PC+V
Sbjct: 43 PSASSSSYYWLTWPPPTPLPDAPPPPPPHPCDV 75
>12_01_1024 -
10467644-10469274,10469424-10469482,10469820-10470357,
10470975-10471666,10471912-10472062,10473797-10473864,
10473964-10474042,10474763-10474765,10476427-10477255
Length = 1349
Score = 30.7 bits (66), Expect = 1.6
Identities = 20/53 (37%), Positives = 24/53 (45%)
Frame = +1
Query: 421 PXMADNGDLREDLKIPDGDLGTQLRTDFDSGKELLCTVLKSCGEECVIAVKAN 579
P N D D I G GTQ D +L +VLKS + CV A KA+
Sbjct: 725 PISQSNRDTDIDHFIELGKSGTQCSGYLDLVDDLTTSVLKSSSDTCVSAAKAS 777
>01_06_1303 -
36132588-36132710,36133879-36134103,36134318-36134713,
36135352-36135547,36135591-36135740,36135818-36135924,
36135987-36136094,36136354-36136435,36136436-36136536,
36136778-36136996,36137455-36137583,36137665-36137742,
36137816-36137929,36138071-36138230,36139224-36139441
Length = 801
Score = 29.5 bits (63), Expect = 3.7
Identities = 18/51 (35%), Positives = 25/51 (49%)
Frame = +3
Query: 99 IQNTTMGDIEDTHFETGDSGASATFPMQCSALRKNGFVMLKGRPCKIVEMS 251
+Q ++ D E H T +ATFPM L N + +GR CK V +S
Sbjct: 431 VQPRSIIDREAMHRGTSIFLPTATFPMFPERLAMNAMSLQQGRGCKSVTVS 481
>08_02_0861 - 21974524-21975224,21975307-21975467,21975563-21976695
Length = 664
Score = 29.1 bits (62), Expect = 4.9
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +1
Query: 466 PDGDLGTQLRTDFDSGKELLCTVLKSCGE 552
PDGDL ++R +SGKEL L G+
Sbjct: 206 PDGDLKDKMRDAMESGKELTSNALALIGK 234
>11_06_0437 - 23533218-23536382
Length = 1054
Score = 28.7 bits (61), Expect = 6.5
Identities = 16/46 (34%), Positives = 22/46 (47%)
Frame = +3
Query: 276 HAKVHLVGIDIFNGKKYEDICPSTHNMDVPHVKREDYQLTDISDDG 413
HA LV + I N +K DI D+ H K+E Y+L + G
Sbjct: 179 HACRKLVDLVIKNKEKTADIENKEKKADIEHKKKEPYKLAIVGTGG 224
>03_02_0360 - 7796799-7796816,7797477-7797587,7797760-7798068
Length = 145
Score = 28.7 bits (61), Expect = 6.5
Identities = 14/44 (31%), Positives = 19/44 (43%), Gaps = 1/44 (2%)
Frame = +1
Query: 130 THTSRPETPGPQPPSPCNVRP-CVKTVSLC*RVVHARLLKCPHP 258
T PE P PP C + P C C ++ +LL+ HP
Sbjct: 3 TAKQAPENESPPPPPHCWIYPECTLVTRSCCLLLRLKLLRHGHP 46
>03_05_1012 +
29670310-29670512,29670856-29671001,29671169-29671245,
29671329-29671451,29671558-29671660,29672100-29672173,
29672249-29672329,29672411-29672563,29672780-29672881
Length = 353
Score = 28.3 bits (60), Expect = 8.6
Identities = 15/52 (28%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = -3
Query: 380 FALHVGYVHVV-CGGTDIFILFTIEDINPNQVNFSVAVLSGFGCGHFNNLAW 228
F L GY+ + GT++F F + NP+ + ++ G C F+ LA+
Sbjct: 63 FYLETGYIGIEEKTGTELFYYFVESETNPDTDPLVLWLVGGPRCSAFSGLAY 114
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,214,875
Number of Sequences: 37544
Number of extensions: 479028
Number of successful extensions: 1726
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1585
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1712
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2479731924
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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