Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP04_F_F23
         (880 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ441131-1|CAD29630.1|  567|Anopheles gambiae putative chitin bi...    24   5.3  
AY341187-1|AAR13751.1|  189|Anopheles gambiae GNBP A1 protein.         24   7.0  
AY341186-1|AAR13750.1|  189|Anopheles gambiae GNBP A1 protein.         24   7.0  
AY341185-1|AAR13749.1|  189|Anopheles gambiae GNBP A1 protein.         24   7.0  
AY341184-1|AAR13748.1|  187|Anopheles gambiae GNBP A1 protein.         24   7.0  
AY341183-1|AAR13747.1|  189|Anopheles gambiae GNBP A1 protein.         24   7.0  
AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking p...    23   9.3  
AY553322-1|AAT36323.1|  426|Anopheles gambiae G-protein coupled ...    23   9.3  

>AJ441131-1|CAD29630.1|  567|Anopheles gambiae putative chitin
           binding protein protein.
          Length = 567

 Score = 24.2 bits (50), Expect = 5.3
 Identities = 25/90 (27%), Positives = 35/90 (38%), Gaps = 4/90 (4%)
 Frame = +1

Query: 124 SKTHTSRPETPGPQPPSP----CNVRPCVKTVSLC*RVVHARLLKCPHPKPESTATLKFT 291
           SK  TS P  P P  PSP       RP   TV     ++    L  P   P S + +  +
Sbjct: 45  SKMPTSYPSLPAPIVPSPGAPIQQSRPQAVTVRSSAPMLPKGGLP-PKGVPSSASPVYMS 103

Query: 292 WLGLISSMVKSMKISVPPHTTWTYPT*SAK 381
               + +   S+ + VPP      PT  A+
Sbjct: 104 PASSLMTKATSLPLGVPPFRPIPKPTPEAE 133


>AY341187-1|AAR13751.1|  189|Anopheles gambiae GNBP A1 protein.
          Length = 189

 Score = 23.8 bits (49), Expect = 7.0
 Identities = 14/31 (45%), Positives = 17/31 (54%)
 Frame = +1

Query: 433 DNGDLREDLKIPDGDLGTQLRTDFDSGKELL 525
           + GD  ED+  PDGD G   R  FD+ K  L
Sbjct: 60  EEGDYTEDVTAPDGD-G---RWTFDTNKPAL 86


>AY341186-1|AAR13750.1|  189|Anopheles gambiae GNBP A1 protein.
          Length = 189

 Score = 23.8 bits (49), Expect = 7.0
 Identities = 14/31 (45%), Positives = 17/31 (54%)
 Frame = +1

Query: 433 DNGDLREDLKIPDGDLGTQLRTDFDSGKELL 525
           + GD  ED+  PDGD G   R  FD+ K  L
Sbjct: 60  EEGDYTEDVTAPDGD-G---RWTFDTNKPAL 86


>AY341185-1|AAR13749.1|  189|Anopheles gambiae GNBP A1 protein.
          Length = 189

 Score = 23.8 bits (49), Expect = 7.0
 Identities = 14/31 (45%), Positives = 17/31 (54%)
 Frame = +1

Query: 433 DNGDLREDLKIPDGDLGTQLRTDFDSGKELL 525
           + GD  ED+  PDGD G   R  FD+ K  L
Sbjct: 60  EEGDYTEDVTAPDGD-G---RWTFDTNKPAL 86


>AY341184-1|AAR13748.1|  187|Anopheles gambiae GNBP A1 protein.
          Length = 187

 Score = 23.8 bits (49), Expect = 7.0
 Identities = 14/31 (45%), Positives = 17/31 (54%)
 Frame = +1

Query: 433 DNGDLREDLKIPDGDLGTQLRTDFDSGKELL 525
           + GD  ED+  PDGD G   R  FD+ K  L
Sbjct: 60  EEGDYTEDVTAPDGD-G---RWTFDTNKPAL 86


>AY341183-1|AAR13747.1|  189|Anopheles gambiae GNBP A1 protein.
          Length = 189

 Score = 23.8 bits (49), Expect = 7.0
 Identities = 14/31 (45%), Positives = 17/31 (54%)
 Frame = +1

Query: 433 DNGDLREDLKIPDGDLGTQLRTDFDSGKELL 525
           + GD  ED+  PDGD G   R  FD+ K  L
Sbjct: 60  EEGDYTEDVTAPDGD-G---RWTFDTNKPAL 86


>AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking
           protein.
          Length = 932

 Score = 23.4 bits (48), Expect = 9.3
 Identities = 13/26 (50%), Positives = 16/26 (61%)
 Frame = +1

Query: 136 TSRPETPGPQPPSPCNVRPCVKTVSL 213
           + R +TPG  PPS   VR   KT+SL
Sbjct: 886 SQRVKTPGDVPPSVRKVR-ASKTLSL 910


>AY553322-1|AAT36323.1|  426|Anopheles gambiae G-protein coupled
           receptor 4 protein.
          Length = 426

 Score = 23.4 bits (48), Expect = 9.3
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = +3

Query: 171 FPMQCSALRKNGFVMLKG 224
           +P++ SA RK G +ML G
Sbjct: 181 YPLRVSAARKRGKIMLGG 198


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 870,896
Number of Sequences: 2352
Number of extensions: 18107
Number of successful extensions: 36
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 94266828
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)