Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP04_F_F22
         (848 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    24   1.7  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    24   1.7  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    21   9.3  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    21   9.3  

>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 9/33 (27%), Positives = 16/33 (48%)
 Frame = -2

Query: 397 FRNLIETLFYKVIHFIMFEFYITILILNRFFII 299
           F N++   FYK      F+ Y+   +   FF++
Sbjct: 136 FANIMGLEFYKQFAIEYFQMYVLFFVNFAFFVV 168


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 9/33 (27%), Positives = 16/33 (48%)
 Frame = -2

Query: 397 FRNLIETLFYKVIHFIMFEFYITILILNRFFII 299
           F N++   FYK      F+ Y+   +   FF++
Sbjct: 136 FANIMGLEFYKQFAIEYFQMYVLFFVNFAFFVV 168


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +1

Query: 574 PXLNLDISYNLITF 615
           P L  D+SYNL +F
Sbjct: 177 PFLPSDVSYNLFSF 190


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +1

Query: 574 PXLNLDISYNLITF 615
           P L  D+SYNL +F
Sbjct: 133 PFLPSDVSYNLFSF 146


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,742
Number of Sequences: 336
Number of extensions: 1533
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23451794
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)