Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP04_F_F18
         (903 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF283275-1|AAG15376.1|  133|Anopheles gambiae small heat shock p...   116   1e-27
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            30   0.11 
AY748839-1|AAV28187.1|  169|Anopheles gambiae cytochrome P450 pr...    25   2.4  
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript...    25   4.2  
AJ441131-8|CAD29637.1|  756|Anopheles gambiae putative 5-oxoprol...    24   5.5  
AJ439398-7|CAD28130.1| 1344|Anopheles gambiae putative 5-oxoprol...    24   5.5  

>AF283275-1|AAG15376.1|  133|Anopheles gambiae small heat shock
           protein protein.
          Length = 133

 Score =  116 bits (278), Expect = 1e-27
 Identities = 57/126 (45%), Positives = 75/126 (59%)
 Frame = +1

Query: 310 DVGSSIKVDKDKFQVNLDVQHFAPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRY 489
           D GS++ + KDKFQ+NLDVQ F+PEEISVK  D  ++V            Y+SR FVRRY
Sbjct: 3   DSGSAVNISKDKFQINLDVQQFSPEEISVKYVDNCVLVEGKHEEKQDDHGYVSRHFVRRY 62

Query: 490 ALPEGAAPETVESRLSSDGVLTITAPRKVPDAVKGERKVPIAQTGPVRKEIKDQSEEANE 669
            LP+G     + S LSSDG+LTIT PRK  +    ER +PI  TG   K++  ++   N 
Sbjct: 63  MLPKGHNEADIVSSLSSDGILTITCPRKEIEQKNEERSIPITHTGQPMKQVTGKAAPENG 122

Query: 670 KEK*KG 687
             K +G
Sbjct: 123 HSKKEG 128


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 29.9 bits (64), Expect = 0.11
 Identities = 17/49 (34%), Positives = 20/49 (40%)
 Frame = +2

Query: 518 LWNRDCHQTGYSPSLRRGRCPTPSRERERCPSHRPVPFARRSRTRAKKP 664
           LW ++C     SP   R    +P        S  P P   RS T AKKP
Sbjct: 341 LWMKNCKSCSISPVSDRSESVSPVPSLPVRSSPEPSPVLLRSPTPAKKP 389


>AY748839-1|AAV28187.1|  169|Anopheles gambiae cytochrome P450
           protein.
          Length = 169

 Score = 25.4 bits (53), Expect = 2.4
 Identities = 13/28 (46%), Positives = 15/28 (53%)
 Frame = +1

Query: 178 RPRRLLDQHFGLALTPDDLLSVAAGPLL 261
           RP R LD+H  LAL  D  +   AG  L
Sbjct: 114 RPERFLDEHGRLALAKDLSVPFGAGKRL 141


>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1168

 Score = 24.6 bits (51), Expect = 4.2
 Identities = 13/35 (37%), Positives = 15/35 (42%)
 Frame = +2

Query: 578  PTPSRERERCPSHRPVPFARRSRTRAKKPTRRKSR 682
            P P R R   PS R     RR R   +   RR+ R
Sbjct: 1108 PIPPRSRRLPPSPRTTEMRRRRRNYMQLQYRRRRR 1142


>AJ441131-8|CAD29637.1|  756|Anopheles gambiae putative
           5-oxoprolinase protein.
          Length = 756

 Score = 24.2 bits (50), Expect = 5.5
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = +1

Query: 136 MSLLPYFFDDFGSRRPRRLLDQHFGLALTPDDLL 237
           +S+ P  + D  +   RR+L Q  G ALT D L+
Sbjct: 34  LSVDPANYPDAPTEGIRRILQQETGRALTVDGLI 67


>AJ439398-7|CAD28130.1| 1344|Anopheles gambiae putative
           5-oxoprolinase protein.
          Length = 1344

 Score = 24.2 bits (50), Expect = 5.5
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = +1

Query: 136 MSLLPYFFDDFGSRRPRRLLDQHFGLALTPDDLL 237
           +S+ P  + D  +   RR+L Q  G ALT D L+
Sbjct: 34  LSVDPANYPDAPTEGIRRILQQETGRALTVDGLI 67


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 696,935
Number of Sequences: 2352
Number of extensions: 13029
Number of successful extensions: 27
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 97574436
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)