Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP04_F_F18
(903 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41109-5|AAB37035.1| 149|Caenorhabditis elegans Heat shock prot... 64 2e-10
U41109-4|AAQ62453.1| 148|Caenorhabditis elegans Heat shock prot... 64 2e-10
L15188-10|AAA27953.1| 110|Caenorhabditis elegans Heat shock pro... 62 5e-10
M14334-1|AAA28070.1| 144|Caenorhabditis elegans protein ( C.ele... 60 2e-09
U39645-6|AAA80366.1| 368|Caenorhabditis elegans Heat shock prot... 59 5e-09
AC006774-2|AAF60616.1| 143|Caenorhabditis elegans Heat shock pr... 58 6e-09
Z81125-8|CAB03380.1| 109|Caenorhabditis elegans Hypothetical pr... 58 1e-08
U64837-8|AAB04842.1| 145|Caenorhabditis elegans Heat shock prot... 57 2e-08
U64837-5|AAB04839.1| 145|Caenorhabditis elegans Heat shock prot... 57 2e-08
K03273-4|AAA28068.1| 145|Caenorhabditis elegans heat shock prot... 57 2e-08
X01577-1|CAA25732.1| 97|Caenorhabditis elegans protein ( C. el... 57 2e-08
AC024830-3|AAF59604.3| 180|Caenorhabditis elegans Hypothetical ... 57 2e-08
K03273-3|AAA28067.1| 144|Caenorhabditis elegans heat shock prot... 56 3e-08
K03273-1|AAA28066.1| 146|Caenorhabditis elegans heat shock prot... 56 3e-08
U29612-8|AAW57827.1| 108|Caenorhabditis elegans Heat shock prot... 56 5e-08
U29612-7|AAO61437.1| 205|Caenorhabditis elegans Heat shock prot... 56 5e-08
U29612-6|AAA68804.1| 219|Caenorhabditis elegans Heat shock prot... 56 5e-08
M14334-2|AAA28071.1| 145|Caenorhabditis elegans protein ( C.ele... 55 8e-08
AC006774-1|AAF60615.1| 145|Caenorhabditis elegans Heat shock pr... 55 8e-08
X01576-1|CAA25731.1| 135|Caenorhabditis elegans C-terminal frag... 54 1e-07
U64837-7|AAB04841.1| 143|Caenorhabditis elegans Heat shock prot... 54 1e-07
U64837-6|AAB04840.1| 143|Caenorhabditis elegans Heat shock prot... 54 1e-07
K03273-2|AAA28069.1| 143|Caenorhabditis elegans heat shock prot... 54 1e-07
Z68342-1|CAA92770.1| 109|Caenorhabditis elegans Hypothetical pr... 54 2e-07
Z47357-12|CAA87429.2| 205|Caenorhabditis elegans Hypothetical p... 52 4e-07
Z30974-3|CAA83227.2| 205|Caenorhabditis elegans Hypothetical pr... 52 4e-07
Z81125-9|CAL64006.1| 112|Caenorhabditis elegans Hypothetical pr... 52 7e-07
EF035034-1|ABK34454.1| 112|Caenorhabditis elegans heat-shock pr... 52 7e-07
Z68342-8|CAA92771.1| 110|Caenorhabditis elegans Hypothetical pr... 48 7e-06
U92044-1|AAC47521.1| 110|Caenorhabditis elegans heat shock prot... 48 7e-06
Z77657-3|CAB01147.1| 147|Caenorhabditis elegans Hypothetical pr... 46 4e-05
Z35640-2|CAA84703.1| 159|Caenorhabditis elegans Hypothetical pr... 44 2e-04
Z77657-2|CAB01146.1| 147|Caenorhabditis elegans Hypothetical pr... 37 0.017
Z49907-8|CAN99663.1| 499|Caenorhabditis elegans Hypothetical pr... 37 0.023
Z49907-7|CAA90088.1| 497|Caenorhabditis elegans Hypothetical pr... 37 0.023
AC024763-9|AAU20836.1| 404|Caenorhabditis elegans Hypothetical ... 32 0.49
AC024763-8|AAK93863.1| 480|Caenorhabditis elegans Hypothetical ... 32 0.49
U28738-9|AAA68314.3| 208|Caenorhabditis elegans Sr protein (spl... 32 0.65
Z70718-5|CAA94670.1| 197|Caenorhabditis elegans Hypothetical pr... 31 1.5
U68185-1|AAC47444.1| 1042|Caenorhabditis elegans ADM-1 prepropro... 31 1.5
AL032626-12|CAA21545.1| 1042|Caenorhabditis elegans Hypothetical... 31 1.5
Z75546-6|CAA99894.1| 155|Caenorhabditis elegans Hypothetical pr... 30 2.0
AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical ... 30 2.0
U88170-2|AAB42250.1| 203|Caenorhabditis elegans Hypothetical pr... 29 3.4
U39850-2|AAA81056.1| 451|Caenorhabditis elegans Hypothetical pr... 29 3.4
M31339-1|AAA28072.1| 22|Caenorhabditis elegans hsp16-48 protein. 29 3.4
DQ641631-1|ABG29106.1| 451|Caenorhabditis elegans sex determini... 29 3.4
Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical pr... 29 4.5
AF125459-6|AAN60503.1| 219|Caenorhabditis elegans Hypothetical ... 29 4.5
AF125459-5|AAD12844.1| 345|Caenorhabditis elegans Hypothetical ... 29 4.5
U88180-1|AAB42294.1| 203|Caenorhabditis elegans Hypothetical pr... 28 7.9
>U41109-5|AAB37035.1| 149|Caenorhabditis elegans Heat shock protein
protein 17,isoform a protein.
Length = 149
Score = 63.7 bits (148), Expect = 2e-10
Identities = 30/84 (35%), Positives = 47/84 (55%), Gaps = 2/84 (2%)
Frame = +1
Query: 313 VGSSIKV--DKDKFQVNLDVQHFAPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRR 486
VG +I V + ++ V++DV F PEE+ V D +++ + R FVR+
Sbjct: 44 VGDAIDVVNNDQEYNVSVDVSQFEPEELKVNIVDNQLIIEGKHNEKTDKYGQVERHFVRK 103
Query: 487 YALPEGAAPETVESRLSSDGVLTI 558
Y LP G PE ++S LS++GVLT+
Sbjct: 104 YNLPTGVRPEQIKSELSNNGVLTV 127
>U41109-4|AAQ62453.1| 148|Caenorhabditis elegans Heat shock protein
protein 17,isoform b protein.
Length = 148
Score = 63.7 bits (148), Expect = 2e-10
Identities = 30/84 (35%), Positives = 47/84 (55%), Gaps = 2/84 (2%)
Frame = +1
Query: 313 VGSSIKV--DKDKFQVNLDVQHFAPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRR 486
VG +I V + ++ V++DV F PEE+ V D +++ + R FVR+
Sbjct: 43 VGDAIDVVNNDQEYNVSVDVSQFEPEELKVNIVDNQLIIEGKHNEKTDKYGQVERHFVRK 102
Query: 487 YALPEGAAPETVESRLSSDGVLTI 558
Y LP G PE ++S LS++GVLT+
Sbjct: 103 YNLPTGVRPEQIKSELSNNGVLTV 126
>L15188-10|AAA27953.1| 110|Caenorhabditis elegans Heat shock
protein protein 12.2 protein.
Length = 110
Score = 62.1 bits (144), Expect = 5e-10
Identities = 31/79 (39%), Positives = 46/79 (58%)
Frame = +1
Query: 337 KDKFQVNLDVQHFAPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRYALPEGAAPE 516
K+KF+V LDVQ F P+EI VK + +++ ++R+ R Y LP+
Sbjct: 31 KEKFEVGLDVQFFTPKEIEVKVSGQELLIHCRHETRSDNHGTVAREINRAYKLPDDVDVS 90
Query: 517 TVESRLSSDGVLTITAPRK 573
TV+S L++ GVLTITA +K
Sbjct: 91 TVKSHLATRGVLTITASKK 109
>M14334-1|AAA28070.1| 144|Caenorhabditis elegans protein (
C.elegans heat shockprotein genes 16-41 and 16-2,
complete cds, flanked byCeRep16 repetitive elements. ).
Length = 144
Score = 60.5 bits (140), Expect = 2e-09
Identities = 35/101 (34%), Positives = 50/101 (49%)
Frame = +1
Query: 310 DVGSSIKVDKDKFQVNLDVQHFAPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRY 489
++G I D+ KF V LDV HF PE + +K DG + Y+ R F +
Sbjct: 43 NIGEQIVNDESKFSVQLDVSHFKPENLKIK-LDGRELKIEGIQETKSEHGYLKRSFSKMI 101
Query: 490 ALPEGAAPETVESRLSSDGVLTITAPRKVPDAVKGERKVPI 612
LPE A +V+S +S++G L I AP+K R +PI
Sbjct: 102 LLPEDADLPSVKSAISNEGKLQIEAPKK----TNSSRSIPI 138
>U39645-6|AAA80366.1| 368|Caenorhabditis elegans Heat shock protein
protein 43 protein.
Length = 368
Score = 58.8 bits (136), Expect = 5e-09
Identities = 33/106 (31%), Positives = 53/106 (50%), Gaps = 1/106 (0%)
Frame = +1
Query: 310 DVGSSIKVDKDKFQVNLDVQHFAPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRY 489
DV S++ D +F V++D F PEEI VKT D +++ + FVR+Y
Sbjct: 102 DVNSNVVNDDRRFAVDMDCYQFRPEEIQVKTLDDTLMIEGRHEDIRDKDNFTKMYFVRKY 161
Query: 490 ALPEGAAPETVESRLSSDGVLTITAPRKVPDAVKG-ERKVPIAQTG 624
LP +++S + + G L + A + A++G ER +PI G
Sbjct: 162 QLPRDVDFNSIQSSIDAKGRLQVEAGKFNNMALQGRERMIPIEGAG 207
>AC006774-2|AAF60616.1| 143|Caenorhabditis elegans Heat shock
protein protein 16.41 protein.
Length = 143
Score = 58.4 bits (135), Expect = 6e-09
Identities = 38/114 (33%), Positives = 53/114 (46%)
Frame = +1
Query: 271 YYRPWRHLAAAARDVGSSIKVDKDKFQVNLDVQHFAPEEISVKTADGYIVVXXXXXXXXX 450
Y+R H + D I D+ KF V LDV HF PE + +K DG +
Sbjct: 29 YWRNADHNSFNFSDNIGEIVNDESKFSVQLDVSHFKPENLKIKL-DGRELKIEGIQETKS 87
Query: 451 XXXYISRQFVRRYALPEGAAPETVESRLSSDGVLTITAPRKVPDAVKGERKVPI 612
Y+ R F + LPE A +V+S +S++G L I AP+K R +PI
Sbjct: 88 EHGYLKRSFSKMILLPEDADLPSVKSAISNEGKLQIEAPKK----TNSSRSIPI 137
>Z81125-8|CAB03380.1| 109|Caenorhabditis elegans Hypothetical
protein T22A3.2a protein.
Length = 109
Score = 57.6 bits (133), Expect = 1e-08
Identities = 30/75 (40%), Positives = 39/75 (52%)
Frame = +1
Query: 340 DKFQVNLDVQHFAPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRYALPEGAAPET 519
+KF+V LD F P +I VK I++ ++R+ R Y LPE P T
Sbjct: 32 EKFEVGLDAGFFGPNDIDVKVNGIEIIIHLRHDNRPTEYGIVNREVHRTYKLPEDVDPST 91
Query: 520 VESRLSSDGVLTITA 564
V S L+S GVLTITA
Sbjct: 92 VRSHLNSSGVLTITA 106
>U64837-8|AAB04842.1| 145|Caenorhabditis elegans Heat shock protein
protein 16.11 protein.
Length = 145
Score = 57.2 bits (132), Expect = 2e-08
Identities = 37/110 (33%), Positives = 55/110 (50%)
Frame = +1
Query: 319 SSIKVDKDKFQVNLDVQHFAPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRYALP 498
S I + KF +NL+V F PE++ + DG+ + Y + F R LP
Sbjct: 41 SEIVNNDQKFAINLNVSQFKPEDLKINL-DGHTLSIQGEQELKTEHGYSKKSFSRVILLP 99
Query: 499 EGAAPETVESRLSSDGVLTITAPRKVPDAVKGERKVPIAQTGPVRKEIKD 648
E V S LS DG L+I AP+K +A++G R +PI Q PV ++ +
Sbjct: 100 EDVDVGAVASNLSEDGKLSIEAPKK--EAIQG-RSIPI-QQAPVEQKTSE 145
>U64837-5|AAB04839.1| 145|Caenorhabditis elegans Heat shock protein
protein 16.1 protein.
Length = 145
Score = 57.2 bits (132), Expect = 2e-08
Identities = 37/110 (33%), Positives = 55/110 (50%)
Frame = +1
Query: 319 SSIKVDKDKFQVNLDVQHFAPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRYALP 498
S I + KF +NL+V F PE++ + DG+ + Y + F R LP
Sbjct: 41 SEIVNNDQKFAINLNVSQFKPEDLKINL-DGHTLSIQGEQELKTEHGYSKKSFSRVILLP 99
Query: 499 EGAAPETVESRLSSDGVLTITAPRKVPDAVKGERKVPIAQTGPVRKEIKD 648
E V S LS DG L+I AP+K +A++G R +PI Q PV ++ +
Sbjct: 100 EDVDVGAVASNLSEDGKLSIEAPKK--EAIQG-RSIPI-QQAPVEQKTSE 145
>K03273-4|AAA28068.1| 145|Caenorhabditis elegans heat shock protein
16-1a protein.
Length = 145
Score = 57.2 bits (132), Expect = 2e-08
Identities = 37/110 (33%), Positives = 55/110 (50%)
Frame = +1
Query: 319 SSIKVDKDKFQVNLDVQHFAPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRYALP 498
S I + KF +NL+V F PE++ + DG+ + Y + F R LP
Sbjct: 41 SEIVNNDQKFAINLNVSQFKPEDLKINL-DGHTLSIQGEQELKTEHGYSKKSFSRVILLP 99
Query: 499 EGAAPETVESRLSSDGVLTITAPRKVPDAVKGERKVPIAQTGPVRKEIKD 648
E V S LS DG L+I AP+K +A++G R +PI Q PV ++ +
Sbjct: 100 EDVDVGAVASNLSEDGKLSIEAPKK--EAIQG-RSIPI-QQAPVEQKTSE 145
>X01577-1|CAA25732.1| 97|Caenorhabditis elegans protein ( C.
elegans mRNA 3'-regionfor heat shock protein hsp 16-41
(exon 2).somal genes.).
Length = 97
Score = 56.8 bits (131), Expect = 2e-08
Identities = 33/93 (35%), Positives = 46/93 (49%)
Frame = +1
Query: 334 DKDKFQVNLDVQHFAPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRYALPEGAAP 513
D+ KF V LDV HF PE + +K DG + Y+ R F + LPE A
Sbjct: 4 DESKFSVQLDVSHFKPENLKIKL-DGRELKIEGIQETKSEHGYLKRSFSKMILLPEDADL 62
Query: 514 ETVESRLSSDGVLTITAPRKVPDAVKGERKVPI 612
+V+S +S++G L I AP+K R +PI
Sbjct: 63 PSVKSAISNEGKLQIEAPKK----TNSSRSIPI 91
>AC024830-3|AAF59604.3| 180|Caenorhabditis elegans Hypothetical
protein Y55F3BR.6 protein.
Length = 180
Score = 56.8 bits (131), Expect = 2e-08
Identities = 33/98 (33%), Positives = 48/98 (48%)
Frame = +1
Query: 319 SSIKVDKDKFQVNLDVQHFAPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRYALP 498
+SI+V F LDV + + + V D I+V I F RR+ LP
Sbjct: 72 TSIRVTNTSFHAILDVSKYDADSLKVTVVDNNIIVEGSHGEKEDTYGTIESTFKRRFPLP 131
Query: 499 EGAAPETVESRLSSDGVLTITAPRKVPDAVKGERKVPI 612
+ APE+V+S+L++DG LTI A P +G R + I
Sbjct: 132 KAVAPESVQSQLTADGHLTIDAKAPEPKQ-EGARPIQI 168
>K03273-3|AAA28067.1| 144|Caenorhabditis elegans heat shock protein
16-48a protein.
Length = 144
Score = 56.4 bits (130), Expect = 3e-08
Identities = 33/101 (32%), Positives = 49/101 (48%)
Frame = +1
Query: 310 DVGSSIKVDKDKFQVNLDVQHFAPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRY 489
++G I D+ KF V LDV HF PE++ ++ DG + Y R F +
Sbjct: 43 NIGEQIVNDESKFSVQLDVSHFKPEDLKIE-LDGRELKIEGIQEKKSEHGYSKRSFSKMI 101
Query: 490 ALPEGAAPETVESRLSSDGVLTITAPRKVPDAVKGERKVPI 612
LPE +V+S +S++G L I AP+K R +PI
Sbjct: 102 LLPEDVDLTSVKSAISNEGKLQIEAPKK----TNSSRSIPI 138
>K03273-1|AAA28066.1| 146|Caenorhabditis elegans heat shock protein
16-1 protein.
Length = 146
Score = 56.0 bits (129), Expect = 3e-08
Identities = 35/102 (34%), Positives = 52/102 (50%)
Frame = +1
Query: 343 KFQVNLDVQHFAPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRYALPEGAAPETV 522
KF +NL+V F PE++ + DG+ + Y + F R LPE V
Sbjct: 50 KFAINLNVSQFKPEDLKINL-DGHTLSIQGEQELKTEHGYSKKSFSRVILLPEDVDVGAV 108
Query: 523 ESRLSSDGVLTITAPRKVPDAVKGERKVPIAQTGPVRKEIKD 648
S LS DG L+I AP+K +A++G R +PI Q PV ++ +
Sbjct: 109 ASNLSEDGKLSIEAPKK--EAIQG-RSIPI-QQAPVEQKTSE 146
>U29612-8|AAW57827.1| 108|Caenorhabditis elegans Heat shock protein
protein 25,isoform c protein.
Length = 108
Score = 55.6 bits (128), Expect = 5e-08
Identities = 27/78 (34%), Positives = 43/78 (55%)
Frame = +1
Query: 334 DKDKFQVNLDVQHFAPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRYALPEGAAP 513
D ++ DV ++ PEE++VKT D ++V + R++ + + LP G P
Sbjct: 24 DGKTLRLRFDVANYKPEEVTVKTIDNRLLVHAKHEEKTPQRT-VFREYNQEFLLPRGTNP 82
Query: 514 ETVESRLSSDGVLTITAP 567
E + S LS+DGVLT+ AP
Sbjct: 83 EQISSTLSTDGVLTVEAP 100
>U29612-7|AAO61437.1| 205|Caenorhabditis elegans Heat shock protein
protein 25,isoform b protein.
Length = 205
Score = 55.6 bits (128), Expect = 5e-08
Identities = 27/78 (34%), Positives = 43/78 (55%)
Frame = +1
Query: 334 DKDKFQVNLDVQHFAPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRYALPEGAAP 513
D ++ DV ++ PEE++VKT D ++V + R++ + + LP G P
Sbjct: 121 DGKTLRLRFDVANYKPEEVTVKTIDNRLLVHAKHEEKTPQRT-VFREYNQEFLLPRGTNP 179
Query: 514 ETVESRLSSDGVLTITAP 567
E + S LS+DGVLT+ AP
Sbjct: 180 EQISSTLSTDGVLTVEAP 197
>U29612-6|AAA68804.1| 219|Caenorhabditis elegans Heat shock protein
protein 25,isoform a protein.
Length = 219
Score = 55.6 bits (128), Expect = 5e-08
Identities = 27/78 (34%), Positives = 43/78 (55%)
Frame = +1
Query: 334 DKDKFQVNLDVQHFAPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRYALPEGAAP 513
D ++ DV ++ PEE++VKT D ++V + R++ + + LP G P
Sbjct: 135 DGKTLRLRFDVANYKPEEVTVKTIDNRLLVHAKHEEKTPQRT-VFREYNQEFLLPRGTNP 193
Query: 514 ETVESRLSSDGVLTITAP 567
E + S LS+DGVLT+ AP
Sbjct: 194 EQISSTLSTDGVLTVEAP 211
>M14334-2|AAA28071.1| 145|Caenorhabditis elegans protein (
C.elegans heat shockprotein genes 16-41 and 16-2,
complete cds, flanked byCeRep16 repetitive elements. ).
Length = 145
Score = 54.8 bits (126), Expect = 8e-08
Identities = 36/100 (36%), Positives = 49/100 (49%)
Frame = +1
Query: 319 SSIKVDKDKFQVNLDVQHFAPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRYALP 498
S I + KF +NL+V F PE++ + DG + Y + F R LP
Sbjct: 41 SEIVNNDQKFAINLNVSQFKPEDLKINL-DGRTLSIQGEQELKTDHGYSKKSFSRVILLP 99
Query: 499 EGAAPETVESRLSSDGVLTITAPRKVPDAVKGERKVPIAQ 618
E V S LS DG L+I AP+K +AV+G R +PI Q
Sbjct: 100 EDVDVGAVASNLSEDGKLSIEAPKK--EAVQG-RSIPIQQ 136
>AC006774-1|AAF60615.1| 145|Caenorhabditis elegans Heat shock
protein protein 16.2 protein.
Length = 145
Score = 54.8 bits (126), Expect = 8e-08
Identities = 36/100 (36%), Positives = 49/100 (49%)
Frame = +1
Query: 319 SSIKVDKDKFQVNLDVQHFAPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRYALP 498
S I + KF +NL+V F PE++ + DG + Y + F R LP
Sbjct: 41 SEIVNNDQKFAINLNVSQFKPEDLKINL-DGRTLSIQGEQELKTDHGYSKKSFSRVILLP 99
Query: 499 EGAAPETVESRLSSDGVLTITAPRKVPDAVKGERKVPIAQ 618
E V S LS DG L+I AP+K +AV+G R +PI Q
Sbjct: 100 EDVDVGAVASNLSEDGKLSIEAPKK--EAVQG-RSIPIQQ 136
>X01576-1|CAA25731.1| 135|Caenorhabditis elegans C-terminal
fragment of hsp 16-48 protein.
Length = 135
Score = 54.4 bits (125), Expect = 1e-07
Identities = 36/114 (31%), Positives = 52/114 (45%)
Frame = +1
Query: 271 YYRPWRHLAAAARDVGSSIKVDKDKFQVNLDVQHFAPEEISVKTADGYIVVXXXXXXXXX 450
Y+R H + D I D+ KF V LDV HF PE++ ++ DG +
Sbjct: 21 YWRNADHNSFNFSDNIGEIVNDESKFSVQLDVSHFKPEDLKIE-LDGRELKIEGIQEKKS 79
Query: 451 XXXYISRQFVRRYALPEGAAPETVESRLSSDGVLTITAPRKVPDAVKGERKVPI 612
Y R F + LPE +V+S +S++G L I AP+K R +PI
Sbjct: 80 EHGYSKRSFSKMILLPEDVDLTSVKSAISNEGKLQIEAPKK----TNSSRSIPI 129
>U64837-7|AAB04841.1| 143|Caenorhabditis elegans Heat shock protein
protein 16.49 protein.
Length = 143
Score = 54.4 bits (125), Expect = 1e-07
Identities = 36/114 (31%), Positives = 52/114 (45%)
Frame = +1
Query: 271 YYRPWRHLAAAARDVGSSIKVDKDKFQVNLDVQHFAPEEISVKTADGYIVVXXXXXXXXX 450
Y+R H + D I D+ KF V LDV HF PE++ ++ DG +
Sbjct: 29 YWRNADHNSFNFSDNIGEIVNDESKFSVQLDVSHFKPEDLKIE-LDGRELKIEGIQEKKS 87
Query: 451 XXXYISRQFVRRYALPEGAAPETVESRLSSDGVLTITAPRKVPDAVKGERKVPI 612
Y R F + LPE +V+S +S++G L I AP+K R +PI
Sbjct: 88 EHGYSKRSFSKMILLPEDVDLTSVKSAISNEGKLQIEAPKK----TNSSRSIPI 137
>U64837-6|AAB04840.1| 143|Caenorhabditis elegans Heat shock protein
protein 16.48 protein.
Length = 143
Score = 54.4 bits (125), Expect = 1e-07
Identities = 36/114 (31%), Positives = 52/114 (45%)
Frame = +1
Query: 271 YYRPWRHLAAAARDVGSSIKVDKDKFQVNLDVQHFAPEEISVKTADGYIVVXXXXXXXXX 450
Y+R H + D I D+ KF V LDV HF PE++ ++ DG +
Sbjct: 29 YWRNADHNSFNFSDNIGEIVNDESKFSVQLDVSHFKPEDLKIE-LDGRELKIEGIQEKKS 87
Query: 451 XXXYISRQFVRRYALPEGAAPETVESRLSSDGVLTITAPRKVPDAVKGERKVPI 612
Y R F + LPE +V+S +S++G L I AP+K R +PI
Sbjct: 88 EHGYSKRSFSKMILLPEDVDLTSVKSAISNEGKLQIEAPKK----TNSSRSIPI 137
>K03273-2|AAA28069.1| 143|Caenorhabditis elegans heat shock protein
16-48 protein.
Length = 143
Score = 54.4 bits (125), Expect = 1e-07
Identities = 36/114 (31%), Positives = 52/114 (45%)
Frame = +1
Query: 271 YYRPWRHLAAAARDVGSSIKVDKDKFQVNLDVQHFAPEEISVKTADGYIVVXXXXXXXXX 450
Y+R H + D I D+ KF V LDV HF PE++ ++ DG +
Sbjct: 29 YWRNADHNSFNFSDNIGEIVNDESKFSVQLDVSHFKPEDLKIE-LDGRELKIEGIQEKKS 87
Query: 451 XXXYISRQFVRRYALPEGAAPETVESRLSSDGVLTITAPRKVPDAVKGERKVPI 612
Y R F + LPE +V+S +S++G L I AP+K R +PI
Sbjct: 88 EHGYSKRSFSKMILLPEDVDLTSVKSAISNEGKLQIEAPKK----TNSSRSIPI 137
>Z68342-1|CAA92770.1| 109|Caenorhabditis elegans Hypothetical
protein F38E11.1 protein.
Length = 109
Score = 53.6 bits (123), Expect = 2e-07
Identities = 25/79 (31%), Positives = 40/79 (50%)
Frame = +1
Query: 337 KDKFQVNLDVQHFAPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRYALPEGAAPE 516
+D F+V L+ +F P EI VK ++ + I+R R Y LP+G P
Sbjct: 30 EDHFEVGLEAHNFLPNEIDVKNIGEFLEIHMAHTTKDDKFGSITRSITRCYRLPKGTDPA 89
Query: 517 TVESRLSSDGVLTITAPRK 573
T++S+L G+L I+ +K
Sbjct: 90 TIKSKLDGSGILHISGNKK 108
>Z47357-12|CAA87429.2| 205|Caenorhabditis elegans Hypothetical
protein ZK1128.7 protein.
Length = 205
Score = 52.4 bits (120), Expect = 4e-07
Identities = 25/76 (32%), Positives = 38/76 (50%)
Frame = +1
Query: 346 FQVNLDVQHFAPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRYALPEGAAPETVE 525
F + +DV HF PEEI V D + + + R F R+Y++P+ +T+
Sbjct: 104 FTIEIDVFHFMPEEIKVVLTDDTLSISGERFESTGDGHTLRRSFSRKYSIPDDVHLDTIR 163
Query: 526 SRLSSDGVLTITAPRK 573
S L++ GVL I RK
Sbjct: 164 SHLTNSGVLIINGSRK 179
>Z30974-3|CAA83227.2| 205|Caenorhabditis elegans Hypothetical
protein ZK1128.7 protein.
Length = 205
Score = 52.4 bits (120), Expect = 4e-07
Identities = 25/76 (32%), Positives = 38/76 (50%)
Frame = +1
Query: 346 FQVNLDVQHFAPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRYALPEGAAPETVE 525
F + +DV HF PEEI V D + + + R F R+Y++P+ +T+
Sbjct: 104 FTIEIDVFHFMPEEIKVVLTDDTLSISGERFESTGDGHTLRRSFSRKYSIPDDVHLDTIR 163
Query: 526 SRLSSDGVLTITAPRK 573
S L++ GVL I RK
Sbjct: 164 SHLTNSGVLIINGSRK 179
>Z81125-9|CAL64006.1| 112|Caenorhabditis elegans Hypothetical
protein T22A3.2b protein.
Length = 112
Score = 51.6 bits (118), Expect = 7e-07
Identities = 30/78 (38%), Positives = 39/78 (50%), Gaps = 3/78 (3%)
Frame = +1
Query: 340 DKFQVNLDVQHFAPEEISVKTADGYIVVXXXXXXXXXXXX---YISRQFVRRYALPEGAA 510
+KF+V LD F P +I VK I++ ++R+ R Y LPE
Sbjct: 32 EKFEVGLDAGFFGPNDIDVKVNGIEIIIHLRHDLLQNRPTEYGIVNREVHRTYKLPEDVD 91
Query: 511 PETVESRLSSDGVLTITA 564
P TV S L+S GVLTITA
Sbjct: 92 PSTVRSHLNSSGVLTITA 109
>EF035034-1|ABK34454.1| 112|Caenorhabditis elegans heat-shock
protein 12.1 protein.
Length = 112
Score = 51.6 bits (118), Expect = 7e-07
Identities = 30/78 (38%), Positives = 39/78 (50%), Gaps = 3/78 (3%)
Frame = +1
Query: 340 DKFQVNLDVQHFAPEEISVKTADGYIVVXXXXXXXXXXXX---YISRQFVRRYALPEGAA 510
+KF+V LD F P +I VK I++ ++R+ R Y LPE
Sbjct: 32 EKFEVGLDAGFFGPNDIDVKVNGIEIIIHLRHDLLQNRPTEYGIVNREVHRTYKLPEDVD 91
Query: 511 PETVESRLSSDGVLTITA 564
P TV S L+S GVLTITA
Sbjct: 92 PSTVRSHLNSSGVLTITA 109
>Z68342-8|CAA92771.1| 110|Caenorhabditis elegans Hypothetical
protein F38E11.2 protein.
Length = 110
Score = 48.4 bits (110), Expect = 7e-06
Identities = 25/77 (32%), Positives = 37/77 (48%)
Frame = +1
Query: 334 DKDKFQVNLDVQHFAPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRYALPEGAAP 513
D D F+V L+ +F P+EI VK + + +SR R Y LP+
Sbjct: 30 DDDHFEVGLEAHNFLPKEIEVKNIGELLEIHMEHNVKKDSFGDVSRNITRCYKLPKNVDM 89
Query: 514 ETVESRLSSDGVLTITA 564
+T++S L S G+L I A
Sbjct: 90 KTIKSNLDSHGILHIEA 106
>U92044-1|AAC47521.1| 110|Caenorhabditis elegans heat shock protein
12.6 protein.
Length = 110
Score = 48.4 bits (110), Expect = 7e-06
Identities = 25/77 (32%), Positives = 37/77 (48%)
Frame = +1
Query: 334 DKDKFQVNLDVQHFAPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRYALPEGAAP 513
D D F+V L+ +F P+EI VK + + +SR R Y LP+
Sbjct: 30 DDDHFEVGLEAHNFLPKEIEVKNIGELLEIHMEHNVKKDSFGDVSRNITRCYKLPKNVDM 89
Query: 514 ETVESRLSSDGVLTITA 564
+T++S L S G+L I A
Sbjct: 90 KTIKSNLDSHGILHIEA 106
>Z77657-3|CAB01147.1| 147|Caenorhabditis elegans Hypothetical
protein F08H9.4 protein.
Length = 147
Score = 46.0 bits (104), Expect = 4e-05
Identities = 34/100 (34%), Positives = 47/100 (47%)
Frame = +1
Query: 319 SSIKVDKDKFQVNLDVQHFAPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRYALP 498
S I DKF VNL+V +F PEE+ V +G + + F R LP
Sbjct: 43 SEIMNSNDKFAVNLNVSNFKPEELKV-NLEGRQLSIQGEHDVENEHGASRKSFSRMILLP 101
Query: 499 EGAAPETVESRLSSDGVLTITAPRKVPDAVKGERKVPIAQ 618
E +V + LS+DG L I AP+ + V G R VP+ +
Sbjct: 102 EDVDITSVATNLSNDGKLCIEAPKL--EGVCG-RSVPVKE 138
>Z35640-2|CAA84703.1| 159|Caenorhabditis elegans Hypothetical
protein F43D9.4 protein.
Length = 159
Score = 43.6 bits (98), Expect = 2e-04
Identities = 22/76 (28%), Positives = 38/76 (50%)
Frame = +1
Query: 343 KFQVNLDVQHFAPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRYALPEGAAPETV 522
KF V LDV F PEE+ V +G+++ + R F R++ LP+ +
Sbjct: 52 KFCVKLDVAAFKPEELKVNL-EGHVLTIEGHHEVKTEHGFSKRSFTRQFTLPKDVDLAHI 110
Query: 523 ESRLSSDGVLTITAPR 570
+ ++ +G +TI AP+
Sbjct: 111 HTVINKEGQMTIDAPK 126
>Z77657-2|CAB01146.1| 147|Caenorhabditis elegans Hypothetical
protein F08H9.3 protein.
Length = 147
Score = 37.1 bits (82), Expect = 0.017
Identities = 27/104 (25%), Positives = 41/104 (39%)
Frame = +1
Query: 259 LNREYYRPWRHLAAAARDVGSSIKVDKDKFQVNLDVQHFAPEEISVKTADGYIVVXXXXX 438
L+REY P D + I +KF VNL+V PEE+ + + +
Sbjct: 23 LDREYV-PISENNDDLSDCRNEIVDTHEKFSVNLNVPDVKPEELKINLEGRKLSIKAEHQ 81
Query: 439 XXXXXXXYISRQFVRRYALPEGAAPETVESRLSSDGVLTITAPR 570
++ + + LPE + S LS DG L I P+
Sbjct: 82 EIENDNISTTQTYSKSIVLPEDVDVTHLSSNLSEDGKLLIEVPK 125
>Z49907-8|CAN99663.1| 499|Caenorhabditis elegans Hypothetical
protein B0491.6b protein.
Length = 499
Score = 36.7 bits (81), Expect = 0.023
Identities = 20/51 (39%), Positives = 27/51 (52%)
Frame = +1
Query: 568 RKVPDAVKGERKVPIAQTGPVRKEIKDQSEEANEKEK*KGL*RTSFITKWR 720
RK K ERK A+T PVR IK + E E+ + L R +++ KWR
Sbjct: 426 RKTHVPPKRERKACAARTTPVRPYIKSNIDTKGETEEERRLRRAAYLRKWR 476
>Z49907-7|CAA90088.1| 497|Caenorhabditis elegans Hypothetical
protein B0491.6a protein.
Length = 497
Score = 36.7 bits (81), Expect = 0.023
Identities = 20/51 (39%), Positives = 27/51 (52%)
Frame = +1
Query: 568 RKVPDAVKGERKVPIAQTGPVRKEIKDQSEEANEKEK*KGL*RTSFITKWR 720
RK K ERK A+T PVR IK + E E+ + L R +++ KWR
Sbjct: 424 RKTHVPPKRERKACAARTTPVRPYIKSNIDTKGETEEERRLRRAAYLRKWR 474
>AC024763-9|AAU20836.1| 404|Caenorhabditis elegans Hypothetical
protein Y39A3CL.7b protein.
Length = 404
Score = 32.3 bits (70), Expect = 0.49
Identities = 21/61 (34%), Positives = 31/61 (50%), Gaps = 4/61 (6%)
Frame = +2
Query: 515 RLWNRDCHQTGYSPSLR----RGRCPTPSRERERCPSHRPVPFARRSRTRAKKPTRRKSR 682
R +NR H+ PSL R R P R+R R S P R+SRT + K +++++
Sbjct: 317 RRFNRFNHRNRSPPSLSSRTSRHRSPERRRDRSRSRSLTYSPIDRKSRTNSDKYDKKRAK 376
Query: 683 K 685
K
Sbjct: 377 K 377
>AC024763-8|AAK93863.1| 480|Caenorhabditis elegans Hypothetical
protein Y39A3CL.7a protein.
Length = 480
Score = 32.3 bits (70), Expect = 0.49
Identities = 21/61 (34%), Positives = 31/61 (50%), Gaps = 4/61 (6%)
Frame = +2
Query: 515 RLWNRDCHQTGYSPSLR----RGRCPTPSRERERCPSHRPVPFARRSRTRAKKPTRRKSR 682
R +NR H+ PSL R R P R+R R S P R+SRT + K +++++
Sbjct: 393 RRFNRFNHRNRSPPSLSSRTSRHRSPERRRDRSRSRSLTYSPIDRKSRTNSDKYDKKRAK 452
Query: 683 K 685
K
Sbjct: 453 K 453
>U28738-9|AAA68314.3| 208|Caenorhabditis elegans Sr protein
(splicing factor) protein5, isoform a protein.
Length = 208
Score = 31.9 bits (69), Expect = 0.65
Identities = 24/84 (28%), Positives = 38/84 (45%), Gaps = 2/84 (2%)
Frame = +2
Query: 425 KASTKRRKTSTGIFQGSSSDVTRCLKARRLRLWNRDCHQTGYSPSLRRGRCPTPSRE--R 598
++ + RR++ T + S S + + R R +R S R P+P R+ R
Sbjct: 90 RSRSPRRRSRTPPRRRSRSRDRKRSRRSRSRSSSRSRSPVRESRRRSESRSPSPKRDLKR 149
Query: 599 ERCPSHRPVPFARRSRTRAKKPTR 670
E S P+P RSRTR+ P +
Sbjct: 150 EASRSRSPLPAKDRSRTRSGSPPK 173
>Z70718-5|CAA94670.1| 197|Caenorhabditis elegans Hypothetical
protein C04G2.8 protein.
Length = 197
Score = 30.7 bits (66), Expect = 1.5
Identities = 27/87 (31%), Positives = 43/87 (49%), Gaps = 2/87 (2%)
Frame = +2
Query: 431 STKRRKTSTGIFQGSS--SDVTRCLKARRLRLWNRDCHQTGYSPSLRRGRCPTPSRERER 604
S +RR++ST S +R +RR +TG S S +R R + SR R R
Sbjct: 78 SPRRRRSSTSRSSRRSVVRSASRGSVSRRSSSRGSVYGRTGRSRSSKRSRSRSRSRSRSR 137
Query: 605 CPSHRPVPFARRSRTRAKKPTRRKSRK 685
S+ RSR+ +++ +RR+SR+
Sbjct: 138 SRSYS------RSRSGSRRSSRRRSRR 158
>U68185-1|AAC47444.1| 1042|Caenorhabditis elegans ADM-1
preproprotein protein.
Length = 1042
Score = 30.7 bits (66), Expect = 1.5
Identities = 14/51 (27%), Positives = 24/51 (47%)
Frame = +2
Query: 578 PTPSRERERCPSHRPVPFARRSRTRAKKPTRRKSRKVYEELRLLQNGVQRD 730
P PS E++ R + F R +K R+ ++K+Y L + +RD
Sbjct: 778 PKPSDEKDEESPDRQIKFGNMPSYREEKRKRKSNKKIYGALNRITEADERD 828
>AL032626-12|CAA21545.1| 1042|Caenorhabditis elegans Hypothetical
protein Y37D8A.13 protein.
Length = 1042
Score = 30.7 bits (66), Expect = 1.5
Identities = 14/51 (27%), Positives = 24/51 (47%)
Frame = +2
Query: 578 PTPSRERERCPSHRPVPFARRSRTRAKKPTRRKSRKVYEELRLLQNGVQRD 730
P PS E++ R + F R +K R+ ++K+Y L + +RD
Sbjct: 778 PKPSDEKDEESPDRQIKFGNMPSYREEKRKRKSNKKIYGALNRITEADERD 828
>Z75546-6|CAA99894.1| 155|Caenorhabditis elegans Hypothetical
protein R05D11.7 protein.
Length = 155
Score = 30.3 bits (65), Expect = 2.0
Identities = 21/73 (28%), Positives = 31/73 (42%), Gaps = 2/73 (2%)
Frame = +2
Query: 527 RDCHQTGYSPSLRRGRCPTPSRERERCPSHRPVPFARRSRTRAKKPTRRKSRKVYEELRL 706
RD + R R +P +R+R R R R R KK K R+ EE+ L
Sbjct: 33 RDARKNRDEKEKRSSRSRSPRDKRDRRERSRSRDRKERDRERQKKDREPKKREKQEEISL 92
Query: 707 --LQNGVQRDVIV 739
LQ+G + ++
Sbjct: 93 ESLQSGADDEAMM 105
>AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3a protein.
Length = 580
Score = 30.3 bits (65), Expect = 2.0
Identities = 21/49 (42%), Positives = 25/49 (51%), Gaps = 4/49 (8%)
Frame = +2
Query: 551 SPSLRRGRCPTPSRERERCPSH-RPVPFAR---RSRTRAKKPTRRKSRK 685
S R R +PSRER R S R P R RSR R + P RR+ R+
Sbjct: 72 SKDRRTTRRRSPSRERRRSRSRDRGAPRRRSRTRSRDRRRSPPRRRDRR 120
>U88170-2|AAB42250.1| 203|Caenorhabditis elegans Hypothetical
protein C10G11.9 protein.
Length = 203
Score = 29.5 bits (63), Expect = 3.4
Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Frame = +2
Query: 431 STKRRKTSTGIFQGSSS---DVTRCLKARRLRLWNRDCHQTGYSPSLRRGRCPTPSRERE 601
S +RR+ ST S V+R K+RR +TG S S +R R + SR R
Sbjct: 83 SPRRRRPSTRRSSSRRSVVRSVSRGSKSRRSSSRGSVYGRTGRSRSSKRSR--SRSRPRT 140
Query: 602 RCPSHRPVPFARRSRTRAKKPTRRKSRK 685
R S + RSR+ +++ +RR+SR+
Sbjct: 141 RSGSRS----SSRSRSGSRRSSRRRSRR 164
>U39850-2|AAA81056.1| 451|Caenorhabditis elegans Hypothetical
protein F52C9.7 protein.
Length = 451
Score = 29.5 bits (63), Expect = 3.4
Identities = 18/43 (41%), Positives = 24/43 (55%)
Frame = +2
Query: 554 PSLRRGRCPTPSRERERCPSHRPVPFARRSRTRAKKPTRRKSR 682
PS R + P SRE R + +P RSR+R+ + RRKSR
Sbjct: 199 PSSSRSKSPRRSREDPRKVARKP----SRSRSRSAERLRRKSR 237
>M31339-1|AAA28072.1| 22|Caenorhabditis elegans hsp16-48 protein.
Length = 22
Score = 29.5 bits (63), Expect = 3.4
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +1
Query: 334 DKDKFQVNLDVQHFAPEE 387
D+ KF V LDV HF PE+
Sbjct: 5 DESKFSVQLDVSHFKPED 22
>DQ641631-1|ABG29106.1| 451|Caenorhabditis elegans sex determining
protein MOG-3 protein.
Length = 451
Score = 29.5 bits (63), Expect = 3.4
Identities = 18/43 (41%), Positives = 24/43 (55%)
Frame = +2
Query: 554 PSLRRGRCPTPSRERERCPSHRPVPFARRSRTRAKKPTRRKSR 682
PS R + P SRE R + +P RSR+R+ + RRKSR
Sbjct: 199 PSSSRSKSPRRSREDPRKVARKP----SRSRSRSAERLRRKSR 237
>Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical
protein F28D9.1 protein.
Length = 601
Score = 29.1 bits (62), Expect = 4.5
Identities = 17/44 (38%), Positives = 23/44 (52%)
Frame = +2
Query: 551 SPSLRRGRCPTPSRERERCPSHRPVPFARRSRTRAKKPTRRKSR 682
SPS + P P R + R S P P RRS +++K P R+ R
Sbjct: 414 SPSASKSP-PAPKRAKSRSKSP-PAPRRRRSPSQSKSPAPRRRR 455
Score = 28.7 bits (61), Expect = 6.0
Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Frame = +2
Query: 578 PTPSRERERCPS--HRPVPFARRSRTRAKKPTRRKSR 682
P P+R R R PS P P +R+++R+K P R+ R
Sbjct: 342 PAPARRR-RSPSASKSPPPAPKRAKSRSKSPPARRRR 377
>AF125459-6|AAN60503.1| 219|Caenorhabditis elegans Hypothetical
protein Y25C1A.8b protein.
Length = 219
Score = 29.1 bits (62), Expect = 4.5
Identities = 16/40 (40%), Positives = 20/40 (50%)
Frame = +2
Query: 563 RRGRCPTPSRERERCPSHRPVPFARRSRTRAKKPTRRKSR 682
RR R + SRER R P RR R ++ RR+SR
Sbjct: 173 RRDRKRSRSRERRRSPPRGTTSDRRRDDERRREKERRRSR 212
>AF125459-5|AAD12844.1| 345|Caenorhabditis elegans Hypothetical
protein Y25C1A.8a protein.
Length = 345
Score = 29.1 bits (62), Expect = 4.5
Identities = 16/40 (40%), Positives = 20/40 (50%)
Frame = +2
Query: 563 RRGRCPTPSRERERCPSHRPVPFARRSRTRAKKPTRRKSR 682
RR R + SRER R P RR R ++ RR+SR
Sbjct: 299 RRDRKRSRSRERRRSPPRGTTSDRRRDDERRREKERRRSR 338
>U88180-1|AAB42294.1| 203|Caenorhabditis elegans Hypothetical
protein T27A3.4 protein.
Length = 203
Score = 28.3 bits (60), Expect = 7.9
Identities = 29/87 (33%), Positives = 42/87 (48%), Gaps = 3/87 (3%)
Frame = +2
Query: 431 STKRRKTSTGIFQGSSS---DVTRCLKARRLRLWNRDCHQTGYSPSLRRGRCPTPSRERE 601
S +RR+ ST S V+R K RR +TG S S +R R + SR R
Sbjct: 83 SPRRRRPSTRRSSSRRSVVRSVSRGSKGRRSSSRGSVYGRTGRSRSSKRSR--SRSRPRT 140
Query: 602 RCPSHRPVPFARRSRTRAKKPTRRKSR 682
R S + RSR+ +++ +RR+SR
Sbjct: 141 RSGSRS----SSRSRSGSRRSSRRRSR 163
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,158,325
Number of Sequences: 27780
Number of extensions: 293535
Number of successful extensions: 1014
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 901
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 986
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2297313942
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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