Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP04_F_F17
         (892 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855490-1|ABH88177.1|  133|Tribolium castaneum chemosensory pro...    25   0.60 
AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine 3-mon...    22   7.4  
AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine 3-mon...    22   7.4  
AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine 3-mon...    22   7.4  
U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       21   9.8  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    21   9.8  

>DQ855490-1|ABH88177.1|  133|Tribolium castaneum chemosensory
           protein 4 protein.
          Length = 133

 Score = 25.4 bits (53), Expect = 0.60
 Identities = 14/58 (24%), Positives = 26/58 (44%)
 Frame = +2

Query: 332 TICTKPSNVNNAPSGPYPLKYVLNTDPDEGPTANAKYSVEAKFNDYHFDYTSSQSSFV 505
           T C+K S      S  + ++Y+++  PD      AKY  +  +   +F+    + S V
Sbjct: 75  TDCSKCSEKQKEGSD-FIMRYLIDNKPDYWKALEAKYDPDGTYKKRYFESQKDEVSKV 131


>AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 290

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = -3

Query: 224 SMALNXKGREQLEGXGVQLPIL 159
           +MAL+ +GR+ L   G++  IL
Sbjct: 53  NMALSNRGRKALRAVGIEKIIL 74


>AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = -3

Query: 224 SMALNXKGREQLEGXGVQLPIL 159
           +MAL+ +GR+ L   G++  IL
Sbjct: 53  NMALSNRGRKALRAVGIEKIIL 74


>AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = -3

Query: 224 SMALNXKGREQLEGXGVQLPIL 159
           +MAL+ +GR+ L   G++  IL
Sbjct: 53  NMALSNRGRKALRAVGIEKIIL 74


>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = -1

Query: 499 GRLGASVIKMVIIKFSLY 446
           GRLGAS + +VI  FS +
Sbjct: 212 GRLGASYVFVVIDVFSKF 229


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 6/16 (37%), Positives = 9/16 (56%)
 Frame = -1

Query: 343 CTYCILSFVSYYSKDW 296
           CT+ + SF+     DW
Sbjct: 51  CTHIVYSFIGVNDADW 66


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 158,992
Number of Sequences: 336
Number of extensions: 3106
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24720487
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)