Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP04_F_F16
         (866 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_02_0480 + 9759271-9759735                                           32   0.52 
09_02_0366 + 7941550-7942161,7942230-7942775                           29   4.8  

>09_02_0480 + 9759271-9759735
          Length = 154

 Score = 32.3 bits (70), Expect = 0.52
 Identities = 28/119 (23%), Positives = 53/119 (44%), Gaps = 4/119 (3%)
 Frame = +2

Query: 428 IQVSNATP--LKDYAFEIKCSTVRYGLGVTREVGQDLVNLNAKNVCVMTDPNVASLSPMK 601
           ++ SN  P  L D+  E +     Y   +TRE          + V +   P    L+P  
Sbjct: 10  VEPSNVIPVTLDDFEGEDRKVMEEYINELTREALMRASTRTRQGVTIKPGPR-PKLAP-- 66

Query: 602 AVLDSLTRNGINYKVYDKVR--VEPTDSSFKDAIHFAKEGNFDSFVAIXGGSVMDXVKL 772
              D ++ + +++ +  ++   ++ +  +FKD +    +G FD F+ I  GS+MD   L
Sbjct: 67  ---DVISNDEVSHSIQQQIASTIDSSVVAFKDQLDAIFKGKFDEFLRIKFGSIMDDYTL 122


>09_02_0366 + 7941550-7942161,7942230-7942775
          Length = 385

 Score = 29.1 bits (62), Expect = 4.8
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = +2

Query: 395 CQCPAHGYRGNIQVSNATPLKDY 463
           C C A G R N++   A PLKD+
Sbjct: 241 CYCCAEGCRNNVEHPRARPLKDF 263


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,626,342
Number of Sequences: 37544
Number of extensions: 298088
Number of successful extensions: 634
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 621
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 634
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2432722788
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)