Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP04_F_F16
         (866 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-3380|AAF46832.1|  464|Drosophila melanogaster CG3425-PA...   159   6e-39
AY094924-1|AAM11277.1|  464|Drosophila melanogaster RH42270p pro...   156   4e-38
U66411-2|AAB71082.1|  397|Drosophila melanogaster putative type ...   153   3e-37
AY060914-1|AAL28462.1|  425|Drosophila melanogaster GM05887p pro...   136   4e-32

>AE013599-3380|AAF46832.1|  464|Drosophila melanogaster CG3425-PA
           protein.
          Length = 464

 Score =  159 bits (385), Expect = 6e-39
 Identities = 82/166 (49%), Positives = 104/166 (62%), Gaps = 3/166 (1%)
 Frame = +2

Query: 347 SRKRIFDLLRTINIASCQCPAHG--YRGNIQVSNATPLKDYAFEIKCSTVRYGLGVTREV 520
           SRK +  L+ TI   SC+CPAH   Y      ++ T   +YAFE+  STVR+G GV+ EV
Sbjct: 2   SRKNVLGLINTIVANSCKCPAHSHNYGSAAPTASQTGRMEYAFEMSASTVRFGPGVSAEV 61

Query: 521 GQDLVNLNAKNVCVMTDPNVASLSPMKAVLDSLTRNGINYKVYDKVRVEPTDSSFKDAIH 700
           G DL NL A+ VC++TD NV  L  +K  LDSL RNGINY+VYD+ RVEPTD S   A+ 
Sbjct: 62  GADLRNLGARKVCLVTDKNVVQLPSVKVALDSLARNGINYEVYDETRVEPTDGSMWHAVE 121

Query: 701 FAKEGNFDSFVAIXGGSVMDXVKLXXVL-**P*C*VLDYVNAPVGK 835
           FA+   FD+F+AI GGS MD  K   +         LDYVN P+G+
Sbjct: 122 FARGKEFDAFLAIGGGSAMDTAKAANLFSSDANAEFLDYVNCPIGR 167


>AY094924-1|AAM11277.1|  464|Drosophila melanogaster RH42270p
           protein.
          Length = 464

 Score =  156 bits (378), Expect = 4e-38
 Identities = 81/166 (48%), Positives = 103/166 (62%), Gaps = 3/166 (1%)
 Frame = +2

Query: 347 SRKRIFDLLRTINIASCQCPAHG--YRGNIQVSNATPLKDYAFEIKCSTVRYGLGVTREV 520
           SRK +  L+ TI   SC+CPAH   Y      ++ T   +YAFE+  STVR+G GV+ EV
Sbjct: 2   SRKNVLGLINTIVANSCKCPAHSHNYGSAAPTASQTGRMEYAFEMSASTVRFGPGVSAEV 61

Query: 521 GQDLVNLNAKNVCVMTDPNVASLSPMKAVLDSLTRNGINYKVYDKVRVEPTDSSFKDAIH 700
           G DL NL A+ VC++TD NV  L  +K  LDSL RNGINY+VYD+  VEPTD S   A+ 
Sbjct: 62  GADLRNLGARKVCLVTDKNVVQLPSVKVALDSLARNGINYEVYDETLVEPTDGSMWHAVE 121

Query: 701 FAKEGNFDSFVAIXGGSVMDXVKLXXVL-**P*C*VLDYVNAPVGK 835
           FA+   FD+F+AI GGS MD  K   +         LDYVN P+G+
Sbjct: 122 FARGKEFDAFLAIGGGSAMDTAKAANLFSSDANAEFLDYVNCPIGR 167


>U66411-2|AAB71082.1|  397|Drosophila melanogaster putative type III
           alcohol dehydrogenaseprotein.
          Length = 397

 Score =  153 bits (371), Expect = 3e-37
 Identities = 75/143 (52%), Positives = 94/143 (65%), Gaps = 2/143 (1%)
 Frame = +2

Query: 347 SRKRIFDLLRTINIASCQCPAHG--YRGNIQVSNATPLKDYAFEIKCSTVRYGLGVTREV 520
           SRK +  L+ TI   SC+CPAH   Y      ++ T   +YAFE+  STVR+G GV+ EV
Sbjct: 2   SRKNVLGLINTIVANSCKCPAHSHNYGSAAPTASQTGRMEYAFEMSASTVRFGPGVSAEV 61

Query: 521 GQDLVNLNAKNVCVMTDPNVASLSPMKAVLDSLTRNGINYKVYDKVRVEPTDSSFKDAIH 700
           G DL NL A+ VC++TD NV  L  +K  LDSL RNGINY+VYD+ RVEPTD S   A+ 
Sbjct: 62  GADLRNLGARKVCLVTDKNVVQLPSVKVALDSLARNGINYEVYDETRVEPTDGSMWHAVE 121

Query: 701 FAKEGNFDSFVAIXGGSVMDXVK 769
           FA+   FD+F+AI GGS MD  K
Sbjct: 122 FARGKEFDAFLAIGGGSAMDTAK 144


>AY060914-1|AAL28462.1|  425|Drosophila melanogaster GM05887p
           protein.
          Length = 425

 Score =  136 bits (329), Expect = 4e-32
 Identities = 68/127 (53%), Positives = 85/127 (66%), Gaps = 1/127 (0%)
 Frame = +2

Query: 458 DYAFEIKCSTVRYGLGVTREVGQDLVNLNAKNVCVMTDPNVASLSPMKAVLDSLTRNGIN 637
           +YAFE+  STVR+G GV+ EVG DL NL A+ VC++TD NV  L  +K  LDSL RNGIN
Sbjct: 2   EYAFEMSASTVRFGPGVSAEVGADLRNLGARKVCLVTDKNVVQLPSVKVALDSLARNGIN 61

Query: 638 YKVYDKVRVEPTDSSFKDAIHFAKEGNFDSFVAIXGGSVMDXVKLXXVL-**P*C*VLDY 814
           Y+VYD+ RVEPTD S   A+ FA+   FD+F+AI GGS MD  K   +         LDY
Sbjct: 62  YEVYDETRVEPTDGSMWHAVEFARGKEFDAFLAIGGGSAMDTAKAANLFSSDANAEFLDY 121

Query: 815 VNAPVGK 835
           VN P+G+
Sbjct: 122 VNCPIGR 128


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,950,671
Number of Sequences: 53049
Number of extensions: 550803
Number of successful extensions: 945
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 922
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 939
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4188579408
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)