Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP04_F_F15
         (872 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic acetylch...    27   0.99 
U89800-1|AAD03793.1|  260|Anopheles gambiae Tc1-like transposase...    24   7.0  
U89799-1|AAD03792.1|  332|Anopheles gambiae Tc1-like transposase...    23   9.2  
AY705394-1|AAU12503.1|  557|Anopheles gambiae nicotinic acetylch...    23   9.2  
AJ441131-3|CAD29632.1|  568|Anopheles gambiae putative apyrase/n...    23   9.2  
AJ439398-2|CAD28125.1|  568|Anopheles gambiae putative 5' nucleo...    23   9.2  

>AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic
           acetylcholine receptor subunitbeta 1 protein.
          Length = 519

 Score = 26.6 bits (56), Expect = 0.99
 Identities = 13/28 (46%), Positives = 19/28 (67%)
 Frame = -3

Query: 471 SHVLSCVITLILWITVLPPLSELIPLAA 388
           S +LS V+ L+L   +LPP S ++PL A
Sbjct: 269 SILLSLVVFLLLVSKILPPTSLVLPLIA 296


>U89800-1|AAD03793.1|  260|Anopheles gambiae Tc1-like transposase
           protein.
          Length = 260

 Score = 23.8 bits (49), Expect = 7.0
 Identities = 15/28 (53%), Positives = 15/28 (53%), Gaps = 1/28 (3%)
 Frame = +3

Query: 723 LTL*VSQFGVXRSLQA-GLCARTPRSAR 803
           L L VS   V R L A G CAR PR  R
Sbjct: 13  LDLQVSAKTVSRRLHAAGFCARRPRKVR 40


>U89799-1|AAD03792.1|  332|Anopheles gambiae Tc1-like transposase
           protein.
          Length = 332

 Score = 23.4 bits (48), Expect = 9.2
 Identities = 15/28 (53%), Positives = 15/28 (53%), Gaps = 1/28 (3%)
 Frame = +3

Query: 723 LTL*VSQFGVXRSLQA-GLCARTPRSAR 803
           L L VS   V R L A G CAR PR  R
Sbjct: 85  LGLQVSAKTVSRRLHAAGFCARRPRKVR 112


>AY705394-1|AAU12503.1|  557|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 1 protein.
          Length = 557

 Score = 23.4 bits (48), Expect = 9.2
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -2

Query: 502 YGSWPFAGLLLTCSFLRYHPDSVDN 428
           +GSW + G ++    L+  PDS DN
Sbjct: 166 FGSWTYDGYMVDLRHLQQTPDS-DN 189


>AJ441131-3|CAD29632.1|  568|Anopheles gambiae putative
           apyrase/nucleotidase protein.
          Length = 568

 Score = 23.4 bits (48), Expect = 9.2
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = +1

Query: 694 PSGSVALSHSSRCRYLS 744
           P+GS  +S S RCRY S
Sbjct: 481 PAGSRVVSVSLRCRYCS 497


>AJ439398-2|CAD28125.1|  568|Anopheles gambiae putative 5'
           nucleotidase protein.
          Length = 568

 Score = 23.4 bits (48), Expect = 9.2
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = +1

Query: 694 PSGSVALSHSSRCRYLS 744
           P+GS  +S S RCRY S
Sbjct: 481 PAGSRVVSVSLRCRYCS 497


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 796,776
Number of Sequences: 2352
Number of extensions: 15536
Number of successful extensions: 26
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 93439926
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)