Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP04_F_F14
(870 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ855496-1|ABH88183.1| 129|Tribolium castaneum chemosensory pro... 27 0.25
DQ855506-1|ABH88193.1| 124|Tribolium castaneum chemosensory pro... 24 1.4
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 23 2.4
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 23 2.4
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 23 2.4
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 23 2.4
AY362544-1|AAQ63456.1| 268|Tribolium castaneum chitin synthase ... 23 4.1
AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase ... 23 4.1
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ... 23 4.1
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ... 23 4.1
EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic acetyl... 22 5.5
EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic acetyl... 22 5.5
EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic acetyl... 22 5.5
EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic acetyl... 22 5.5
U77974-1|AAB36556.1| 276|Tribolium castaneum transcription fact... 22 7.2
DQ855499-1|ABH88186.1| 124|Tribolium castaneum chemosensory pro... 22 7.2
AM295015-1|CAL25730.1| 549|Tribolium castaneum ecdysone recepto... 22 7.2
EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic acetyl... 21 9.5
DQ855503-1|ABH88190.1| 124|Tribolium castaneum chemosensory pro... 21 9.5
>DQ855496-1|ABH88183.1| 129|Tribolium castaneum chemosensory
protein 10 protein.
Length = 129
Score = 26.6 bits (56), Expect = 0.25
Identities = 16/46 (34%), Positives = 27/46 (58%)
Frame = +2
Query: 647 KMDSARCQDLLPEDLCLPENLYHYITSIGNTTTVNGEEIKFNLPDA 784
K D+ +++L D L +N ++ + G T + +GEE+K LPDA
Sbjct: 27 KYDNIDLEEILKSDRLL-KNYFNCLMERG-TCSPDGEELKKALPDA 70
>DQ855506-1|ABH88193.1| 124|Tribolium castaneum chemosensory
protein 20 protein.
Length = 124
Score = 24.2 bits (50), Expect = 1.4
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = +2
Query: 647 KMDSARCQDLLPEDLCLPENLYHYITSIGNTTTVNGEEIKFNLPDA 784
K D+ +++L D L EN + + T +GEE+K LPDA
Sbjct: 26 KYDNVNLKEILQSDR-LTENYVNCLLE-KKPCTPDGEELKRVLPDA 69
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 23.4 bits (48), Expect = 2.4
Identities = 7/19 (36%), Positives = 11/19 (57%)
Frame = -1
Query: 147 WLTXSKALGLGIIICHPGC 91
WL + +G ++C PGC
Sbjct: 786 WLQKATEHVIGCVLCSPGC 804
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 23.4 bits (48), Expect = 2.4
Identities = 7/19 (36%), Positives = 11/19 (57%)
Frame = -1
Query: 147 WLTXSKALGLGIIICHPGC 91
WL + +G ++C PGC
Sbjct: 786 WLQKATEHVIGCVLCSPGC 804
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
CHS1B protein.
Length = 1558
Score = 23.4 bits (48), Expect = 2.4
Identities = 7/19 (36%), Positives = 11/19 (57%)
Frame = -1
Query: 147 WLTXSKALGLGIIICHPGC 91
WL + +G ++C PGC
Sbjct: 786 WLQKATEHVIGCVLCSPGC 804
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
CHS1A protein.
Length = 1558
Score = 23.4 bits (48), Expect = 2.4
Identities = 7/19 (36%), Positives = 11/19 (57%)
Frame = -1
Query: 147 WLTXSKALGLGIIICHPGC 91
WL + +G ++C PGC
Sbjct: 786 WLQKATEHVIGCVLCSPGC 804
>AY362544-1|AAQ63456.1| 268|Tribolium castaneum chitin synthase
protein.
Length = 268
Score = 22.6 bits (46), Expect = 4.1
Identities = 6/19 (31%), Positives = 11/19 (57%)
Frame = -1
Query: 147 WLTXSKALGLGIIICHPGC 91
W+ + +G ++C PGC
Sbjct: 212 WMQKATEHVIGCVLCSPGC 230
>AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase
protein.
Length = 677
Score = 22.6 bits (46), Expect = 4.1
Identities = 6/19 (31%), Positives = 11/19 (57%)
Frame = -1
Query: 147 WLTXSKALGLGIIICHPGC 91
W+ + +G ++C PGC
Sbjct: 526 WMQKATEHVIGCVLCSPGC 544
>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
protein.
Length = 1464
Score = 22.6 bits (46), Expect = 4.1
Identities = 6/19 (31%), Positives = 11/19 (57%)
Frame = -1
Query: 147 WLTXSKALGLGIIICHPGC 91
W+ + +G ++C PGC
Sbjct: 759 WMQKATEHVIGCVLCSPGC 777
>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
CHS2 protein.
Length = 1464
Score = 22.6 bits (46), Expect = 4.1
Identities = 6/19 (31%), Positives = 11/19 (57%)
Frame = -1
Query: 147 WLTXSKALGLGIIICHPGC 91
W+ + +G ++C PGC
Sbjct: 759 WMQKATEHVIGCVLCSPGC 777
>EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
5 protein.
Length = 311
Score = 22.2 bits (45), Expect = 5.5
Identities = 10/26 (38%), Positives = 12/26 (46%)
Frame = -2
Query: 302 LWVGPRGFCSLCSKSRTWFQSSRRAC 225
L+V P F S C TWF + C
Sbjct: 117 LYVPPGIFKSTCKMDITWFPFDDQHC 142
>EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
4 protein.
Length = 311
Score = 22.2 bits (45), Expect = 5.5
Identities = 10/26 (38%), Positives = 12/26 (46%)
Frame = -2
Query: 302 LWVGPRGFCSLCSKSRTWFQSSRRAC 225
L+V P F S C TWF + C
Sbjct: 117 LYVPPGIFKSTCKMDITWFPFDDQHC 142
>EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
3 protein.
Length = 311
Score = 22.2 bits (45), Expect = 5.5
Identities = 10/26 (38%), Positives = 12/26 (46%)
Frame = -2
Query: 302 LWVGPRGFCSLCSKSRTWFQSSRRAC 225
L+V P F S C TWF + C
Sbjct: 117 LYVPPGIFKSTCKMDITWFPFDDQHC 142
>EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
1 protein.
Length = 311
Score = 22.2 bits (45), Expect = 5.5
Identities = 10/26 (38%), Positives = 12/26 (46%)
Frame = -2
Query: 302 LWVGPRGFCSLCSKSRTWFQSSRRAC 225
L+V P F S C TWF + C
Sbjct: 117 LYVPPGIFKSTCKMDITWFPFDDQHC 142
>U77974-1|AAB36556.1| 276|Tribolium castaneum transcription factor
homolog protein.
Length = 276
Score = 21.8 bits (44), Expect = 7.2
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = -2
Query: 680 VKGPGISLNPSFSHHYLKLN 621
++ PG++LNP + L LN
Sbjct: 191 LQNPGLNLNPPVTQTQLPLN 210
>DQ855499-1|ABH88186.1| 124|Tribolium castaneum chemosensory
protein 13 protein.
Length = 124
Score = 21.8 bits (44), Expect = 7.2
Identities = 8/14 (57%), Positives = 12/14 (85%)
Frame = +2
Query: 743 TVNGEEIKFNLPDA 784
T +GEE+K ++PDA
Sbjct: 52 TPSGEELKKDIPDA 65
>AM295015-1|CAL25730.1| 549|Tribolium castaneum ecdysone receptor
(isoform A) protein.
Length = 549
Score = 21.8 bits (44), Expect = 7.2
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = -2
Query: 185 PCVTPPAGLPRGCG 144
PC T GLP G G
Sbjct: 37 PCATGSNGLPAGAG 50
>EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
2 protein.
Length = 311
Score = 21.4 bits (43), Expect = 9.5
Identities = 10/26 (38%), Positives = 12/26 (46%)
Frame = -2
Query: 302 LWVGPRGFCSLCSKSRTWFQSSRRAC 225
L+V P F S C TWF + C
Sbjct: 117 LYVPPGIFKSTCKIDITWFPFDDQHC 142
>DQ855503-1|ABH88190.1| 124|Tribolium castaneum chemosensory
protein 17 protein.
Length = 124
Score = 21.4 bits (43), Expect = 9.5
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = +2
Query: 743 TVNGEEIKFNLPDA 784
T GEE+K ++PDA
Sbjct: 53 TPEGEELKKDIPDA 66
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 181,693
Number of Sequences: 336
Number of extensions: 3864
Number of successful extensions: 19
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 23996456
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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