Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP04_F_F14
         (870 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL132876-33|CAI79187.1| 1133|Caenorhabditis elegans Hypothetical...    32   0.46 
AL132876-32|CAD56252.2| 1172|Caenorhabditis elegans Hypothetical...    32   0.46 
Z69664-5|CAE17882.2|  360|Caenorhabditis elegans Hypothetical pr...    29   5.7  
U23486-5|AAL38958.2|  326|Caenorhabditis elegans Serpentine rece...    29   5.7  
U00055-3|AAA50723.3|  693|Caenorhabditis elegans Hypothetical pr...    28   7.5  
AC024770-5|AAK84605.2|  684|Caenorhabditis elegans Hypothetical ...    28   7.5  
AF039716-7|AAB96735.3|  617|Caenorhabditis elegans Sodium:neurot...    28   10.0 
AF038615-7|AAB94147.1|  479|Caenorhabditis elegans Hypothetical ...    28   10.0 

>AL132876-33|CAI79187.1| 1133|Caenorhabditis elegans Hypothetical
           protein Y105E8A.26b protein.
          Length = 1133

 Score = 32.3 bits (70), Expect = 0.46
 Identities = 17/71 (23%), Positives = 31/71 (43%)
 Frame = +2

Query: 110 IIPRPKALEXVNHNRVAIPLVV*RKAAGTIAVPTSSSRDKLSVTTGTKFVTLNKENRNLA 289
           II     ++ +   RVA+P++   +      +  S  +D   +  G KF      N  LA
Sbjct: 116 IIKNKDHIDMIVKRRVAVPMLEYEQRTLKFTLSKSRKKDDFGIVVGCKFYIKEIRNPKLA 175

Query: 290 DQPRGQRTGES 322
           ++  G + G+S
Sbjct: 176 EKDPGLKEGDS 186


>AL132876-32|CAD56252.2| 1172|Caenorhabditis elegans Hypothetical
           protein Y105E8A.26a protein.
          Length = 1172

 Score = 32.3 bits (70), Expect = 0.46
 Identities = 17/71 (23%), Positives = 31/71 (43%)
 Frame = +2

Query: 110 IIPRPKALEXVNHNRVAIPLVV*RKAAGTIAVPTSSSRDKLSVTTGTKFVTLNKENRNLA 289
           II     ++ +   RVA+P++   +      +  S  +D   +  G KF      N  LA
Sbjct: 116 IIKNKDHIDMIVKRRVAVPMLEYEQRTLKFTLSKSRKKDDFGIVVGCKFYIKEIRNPKLA 175

Query: 290 DQPRGQRTGES 322
           ++  G + G+S
Sbjct: 176 EKDPGLKEGDS 186


>Z69664-5|CAE17882.2|  360|Caenorhabditis elegans Hypothetical
           protein K04D7.6 protein.
          Length = 360

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 14/43 (32%), Positives = 24/43 (55%)
 Frame = +3

Query: 552 WIGVCPSVCSNIRCVLFLMHTSSI*L*IMVRERWIQRDARTFY 680
           W+ V  SV ++    L+L  TSS+ L + +RE+ ++     FY
Sbjct: 101 WLFVASSVETSFHYTLYLQFTSSVLLYVFLREKDLKSSWTLFY 143


>U23486-5|AAL38958.2|  326|Caenorhabditis elegans Serpentine
           receptor, class x protein114 protein.
          Length = 326

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 13/37 (35%), Positives = 22/37 (59%)
 Frame = +2

Query: 374 LTILERRRKRPQLMNRSTTWDPILARSLFQETYSQNF 484
           +T + R+R+  +++ +S   D I+A   F  TYS NF
Sbjct: 210 MTHITRQRRNRKMLFQSVCQDLIIAIDTFNSTYSWNF 246


>U00055-3|AAA50723.3|  693|Caenorhabditis elegans Hypothetical
           protein R02F2.7 protein.
          Length = 693

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 21/76 (27%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
 Frame = +2

Query: 575 MFQHSMCTVLNAYIIDLTLDNGERKMDSARCQDLLPEDLCLPENLYHYITSI-GNTTTVN 751
           +   S C+ L A +I+  L   E K  + RCQ     ++C+   +Y+ + S+  +T  +N
Sbjct: 250 ILSESTCSQLLAKVIEDNLAKNELKQLARRCQ---TAEVCMSPCIYYAMISVLRSTFDLN 306

Query: 752 GEEIKFNLPDAAILKL 799
             E+ F + +   LKL
Sbjct: 307 DSELIF-IENLKTLKL 321


>AC024770-5|AAK84605.2|  684|Caenorhabditis elegans Hypothetical
           protein Y39H10A.6 protein.
          Length = 684

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 22/73 (30%), Positives = 31/73 (42%), Gaps = 1/73 (1%)
 Frame = +2

Query: 491 GGYIDQVERTYEALRGVDPRLDRRMPFSMFQHSMCTVLNAYIIDLTLDN-GERKMDSARC 667
           G Y D +    + +RGV   LD    F  F      VL        +D   ER+   A  
Sbjct: 140 GRYFDALFTMQKMIRGVI--LDHSEHFDYFDTFFKDVLLGNCRYQNIDQVAERQSQLAFL 197

Query: 668 QDLLPEDLCLPEN 706
           +++LP D  LP+N
Sbjct: 198 EEILPSDFILPQN 210


>AF039716-7|AAB96735.3|  617|Caenorhabditis elegans
           Sodium:neurotransmitter symporterfamily protein 1
           protein.
          Length = 617

 Score = 27.9 bits (59), Expect = 10.0
 Identities = 12/28 (42%), Positives = 15/28 (53%)
 Frame = -3

Query: 184 LASHHQRDCHAVVVDXFQSLGPGYYYLP 101
           L +HH RD  A  +  + S  PGY  LP
Sbjct: 579 LQNHHHRDEKAQPIPRYTSNAPGYLLLP 606


>AF038615-7|AAB94147.1|  479|Caenorhabditis elegans Hypothetical
           protein R02D3.7 protein.
          Length = 479

 Score = 27.9 bits (59), Expect = 10.0
 Identities = 13/38 (34%), Positives = 22/38 (57%)
 Frame = +2

Query: 650 MDSARCQDLLPEDLCLPENLYHYITSIGNTTTVNGEEI 763
           +D  RC +      CL +N+Y ++T I N TT + +E+
Sbjct: 13  IDQIRCPECALT--CLQKNIYRHMTQIHNWTTEDCQEL 48


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,524,125
Number of Sequences: 27780
Number of extensions: 357951
Number of successful extensions: 940
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 891
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 940
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2181923744
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)