Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP04_F_F11
         (896 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY035716-1|AAK61362.1|  136|Anopheles gambiae histone 3A protein.     252   1e-68
Y09952-1|CAA71083.1|  115|Anopheles gambiae histone H3 protein.       232   9e-63
EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calc...    27   0.58 
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript...    27   1.0  
L10441-1|AAA29361.1|  154|Anopheles gambiae transposase protein.       24   7.2  
L10438-1|AAA29359.1|  154|Anopheles gambiae transposase protein.       24   7.2  
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    23   9.5  
AJ000037-1|CAA03873.1|   94|Anopheles gambiae D3 protein protein.      23   9.5  

>AY035716-1|AAK61362.1|  136|Anopheles gambiae histone 3A protein.
          Length = 136

 Score =  252 bits (617), Expect = 1e-68
 Identities = 123/127 (96%), Positives = 126/127 (99%)
 Frame = +1

Query: 91  MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE 270
           MARTKQTARKSTGGKAPRKQLATKAARKSAP+TGGVKKPHRYRPGTVALREIRRYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 60

Query: 271 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTI 450
           LLIRKLPFQRLVREIAQDFKTDLRFQS+A+ ALQEASEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 451 MPKDIQL 471
           MPKDIQL
Sbjct: 121 MPKDIQL 127


>Y09952-1|CAA71083.1|  115|Anopheles gambiae histone H3 protein.
          Length = 115

 Score =  232 bits (568), Expect = 9e-63
 Identities = 114/115 (99%), Positives = 114/115 (99%)
 Frame = +1

Query: 97  RTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELL 276
           RTKQTARKSTGGKAPRKQLA KAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELL
Sbjct: 1   RTKQTARKSTGGKAPRKQLARKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELL 60

Query: 277 IRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKR 441
           IRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKR
Sbjct: 61  IRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKR 115


>EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calcium
           channel alpha2-delta subunit 1 protein.
          Length = 1256

 Score = 27.5 bits (58), Expect = 0.58
 Identities = 13/50 (26%), Positives = 30/50 (60%)
 Frame = +1

Query: 235 LREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASE 384
           + +IR   K +++ + +     L+RE+A + K  + F+ +AVM + +++E
Sbjct: 71  VNDIRNRFKDSDVDVTRKDGILLLRELAAEVKNFMDFKMNAVMRIMDSAE 120


>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 26.6 bits (56), Expect = 1.0
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = +3

Query: 411 HQLVRHSCQKGHHYAKGYSAGEESAGR 491
           HQL+ +S  +    ++G S G  SAGR
Sbjct: 219 HQLITYSVGEAEQQSRGLSTGGPSAGR 245


>L10441-1|AAA29361.1|  154|Anopheles gambiae transposase protein.
          Length = 154

 Score = 23.8 bits (49), Expect = 7.2
 Identities = 12/22 (54%), Positives = 15/22 (68%)
 Frame = +3

Query: 114 PKVDRGESSAQTTRDESCPKKR 179
           PK +R +SS  T RDE  PK+R
Sbjct: 43  PKSNR-QSSEWTGRDEPAPKRR 63


>L10438-1|AAA29359.1|  154|Anopheles gambiae transposase protein.
          Length = 154

 Score = 23.8 bits (49), Expect = 7.2
 Identities = 12/22 (54%), Positives = 15/22 (68%)
 Frame = +3

Query: 114 PKVDRGESSAQTTRDESCPKKR 179
           PK +R +SS  T RDE  PK+R
Sbjct: 43  PKSNR-QSSEWTGRDEPAPKRR 63


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
           protein.
          Length = 3325

 Score = 23.4 bits (48), Expect = 9.5
 Identities = 11/38 (28%), Positives = 18/38 (47%)
 Frame = -3

Query: 264 AFLVSPYLSEGYGAGSISVGLLHAAGRRCAFSGSFRRE 151
           +F   P LS+G+    ++   L  A  RC F   ++ E
Sbjct: 362 SFDTDPKLSQGHKCDVVAATFLDVAVLRCLFISHWQEE 399


>AJ000037-1|CAA03873.1|   94|Anopheles gambiae D3 protein protein.
          Length = 94

 Score = 23.4 bits (48), Expect = 9.5
 Identities = 9/26 (34%), Positives = 17/26 (65%)
 Frame = -2

Query: 151 VVCAELSPLSTFGRSASFEPFPSKTD 74
           ++ A  + L+  G+ A+ +PFP +TD
Sbjct: 9   LLLASAAVLAAGGQEATEDPFPDETD 34


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 633,699
Number of Sequences: 2352
Number of extensions: 12379
Number of successful extensions: 24
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 96747534
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)