Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP04_F_F08
         (874 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY600516-1|AAT11864.1|  143|Tribolium castaneum optomotor-blind-...    24   1.4  
AY600515-1|AAT11863.1|  134|Tribolium castaneum optomotor-blind-...    24   1.4  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    24   1.4  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   4.1  
DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13 pro...    21   9.6  

>AY600516-1|AAT11864.1|  143|Tribolium castaneum
           optomotor-blind-like protein protein.
          Length = 143

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 12/33 (36%), Positives = 19/33 (57%)
 Frame = +1

Query: 73  DVXXPAVMKLNVSYPATGCQKLFEVVDEHKLRI 171
           D   P  M ++   P+TG Q + +VV  HKL++
Sbjct: 47  DPEMPKRMYIHPDSPSTGEQWMQKVVSFHKLKL 79


>AY600515-1|AAT11863.1|  134|Tribolium castaneum
           optomotor-blind-like protein protein.
          Length = 134

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 12/33 (36%), Positives = 19/33 (57%)
 Frame = +1

Query: 73  DVXXPAVMKLNVSYPATGCQKLFEVVDEHKLRI 171
           D   P  M ++   P+TG Q + +VV  HKL++
Sbjct: 47  DPEMPKRMYIHPDSPSTGEQWMQKVVSFHKLKL 79


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 10/51 (19%), Positives = 27/51 (52%)
 Frame = -2

Query: 648 VXSLWXXRCLMXGFSIFFSFLGWEHAFDDITTYIIFFAKVEQLTDFGSTFG 496
           + S+   + +  G   ++  + + H F+ +  Y ++ A + Q+++  +TFG
Sbjct: 484 IDSVACSKTVSDGIRHYYVNVTFPHLFNGLVDYSLWKALIFQISNLQTTFG 534


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 11/39 (28%), Positives = 17/39 (43%)
 Frame = +1

Query: 76   VXXPAVMKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMG 192
            +  PAV+   V  P+  C+    V D H    +Y   +G
Sbjct: 1086 IPPPAVVMPEVDKPSQPCEPGQYVPDPHNCNAYYRCVLG 1124


>DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13
           protein.
          Length = 377

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +1

Query: 532 LSKEDDVRRYVVKRVLPAKEGKENAK 609
           L +E+D+ +  +KRV   KE   N K
Sbjct: 71  LDEENDINQGGLKRVSALKEKNPNLK 96


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,398
Number of Sequences: 336
Number of extensions: 3279
Number of successful extensions: 10
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24099889
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)