Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP04_F_F07
(887 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_01_0004 - 34967-35149,35340-35501,36078-36225,36309-36385,365... 33 0.40
10_06_0039 - 9966744-9967535,9968241-9968482,9969021-9969223,996... 31 1.2
02_05_0686 - 30900748-30902167,30903442-30904742 31 1.6
01_06_1737 - 39559321-39559461,39559761-39559817,39559919-395601... 30 2.1
03_01_0538 - 4038954-4039444,4040172-4040248,4040838-4040911,404... 30 2.8
08_01_0059 - 394001-394708 29 3.7
04_04_0201 - 23555336-23556008,23556097-23556258,23556353-235572... 29 3.7
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943... 29 3.7
08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,336... 29 4.9
07_01_0080 + 587674-588510 29 4.9
01_05_0490 + 22672241-22674679 29 4.9
12_02_1174 - 26696869-26698191 29 6.5
11_01_0035 - 256087-256185,256287-256430,256521-256632,256777-25... 29 6.5
01_06_1678 - 39095986-39096205,39096400-39096477,39096578-390969... 29 6.5
01_06_1670 - 39007402-39008229,39008320-39008567,39009159-390093... 29 6.5
09_04_0180 + 15367737-15367755,15368874-15369739 28 8.6
08_01_0539 + 4679392-4681282,4682060-4682104,4682403-4683560,468... 28 8.6
03_02_0514 + 9038606-9039790,9040211-9040432,9040548-9040655,904... 28 8.6
03_02_0071 + 5425722-5427154,5427259-5427464,5428445-5428686,542... 28 8.6
01_01_0446 + 3321832-3322232,3322398-3322455,3322810-3323748,332... 28 8.6
>05_01_0004 -
34967-35149,35340-35501,36078-36225,36309-36385,
36507-36577,36850-37263,37518-38268
Length = 601
Score = 32.7 bits (71), Expect = 0.40
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = +2
Query: 773 PPQNPPPXPFXXPXXXLRXXXPXPXPPGRXXPXPXNP 883
PP PP P P P P PP R P P P
Sbjct: 59 PPPASPPLPSATPPLAASPPPPPPPPPPRNSPSPPKP 95
>10_06_0039 -
9966744-9967535,9968241-9968482,9969021-9969223,
9969333-9970645
Length = 849
Score = 31.1 bits (67), Expect = 1.2
Identities = 15/37 (40%), Positives = 15/37 (40%)
Frame = +2
Query: 773 PPQNPPPXPFXXPXXXLRXXXPXPXPPGRXXPXPXNP 883
PP NPPP P P R P PP P P P
Sbjct: 323 PPSNPPPAPPPPPPPPSRFNNTTPKPP--PPPPPPEP 357
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 30.7 bits (66), Expect = 1.6
Identities = 17/42 (40%), Positives = 17/42 (40%)
Frame = +2
Query: 446 KKXPPPXGXXGXXXXPPPPPRXXKNXGXPRXGGXXXXPPXGG 571
K PPP G PPPPP K GG PP GG
Sbjct: 351 KGPPPPPPPKGPSPPPPPPPGGKK-------GGPPPPPPKGG 385
Score = 29.9 bits (64), Expect = 2.8
Identities = 15/39 (38%), Positives = 16/39 (41%)
Frame = +2
Query: 446 KKXPPPXGXXGXXXXPPPPPRXXKNXGXPRXGGXXXXPP 562
K PPP G PPPPP+ P GG PP
Sbjct: 342 KGPPPPPPAKGPP--PPPPPKGPSPPPPPPPGGKKGGPP 378
>01_06_1737 -
39559321-39559461,39559761-39559817,39559919-39560117,
39560217-39560344,39560443-39560548,39560721-39560800,
39561189-39561286,39561368-39561481,39561567-39561707,
39561801-39561885,39562761-39563099
Length = 495
Score = 30.3 bits (65), Expect = 2.1
Identities = 16/48 (33%), Positives = 19/48 (39%)
Frame = -1
Query: 665 GGXFXGXXPFGGXFRGNVFLGAPPXXGVFRXPPLXGGXXXPPPPAXXP 522
GG G P+G G + GAP G + P PPPP P
Sbjct: 35 GGGGGGGYPYGQDAHGGGYYGAPAPQGGYAAP--YPAYQQPPPPMPSP 80
>03_01_0538 -
4038954-4039444,4040172-4040248,4040838-4040911,
4041115-4041203,4041481-4041563,4041645-4042233,
4042915-4043101
Length = 529
Score = 29.9 bits (64), Expect = 2.8
Identities = 14/38 (36%), Positives = 15/38 (39%)
Frame = -2
Query: 601 PPXXXGFLGFPPXXGXXPXPPXPRXAXVFXXAGGGGGG 488
PP + PP PP P AGGGGGG
Sbjct: 152 PPPQQDHIFLPPHGQYFLGPPNPMAPAPMYNAGGGGGG 189
>08_01_0059 - 394001-394708
Length = 235
Score = 29.5 bits (63), Expect = 3.7
Identities = 14/34 (41%), Positives = 15/34 (44%)
Frame = +2
Query: 773 PPQNPPPXPFXXPXXXLRXXXPXPXPPGRXXPXP 874
PP+ PP P P R P P PP R P P
Sbjct: 6 PPRRAPPPPATPPPPP-RRAPPPPSPPIRPPPPP 38
>04_04_0201 -
23555336-23556008,23556097-23556258,23556353-23557206,
23557452-23557613,23558197-23558649,23559729-23559788,
23559983-23560058,23561546-23561593,23561948-23562022,
23562067-23562494
Length = 996
Score = 29.5 bits (63), Expect = 3.7
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = -2
Query: 571 PPXXGXXPXPPXPRXAXVFXXAGGGGG 491
PP G P P P+ F GGGGG
Sbjct: 295 PPEDGCSPLPLTPQFGQKFGSGGGGGG 321
>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
9435445-9435526,9435610-9435660,9435749-9435829,
9435965-9436006,9436117-9436215,9438130-9438201,
9438557-9438680,9438850-9439723,9440274-9440456,
9440941-9442741,9442825-9443049,9443117-9443814,
9444519-9444591
Length = 1541
Score = 29.5 bits (63), Expect = 3.7
Identities = 13/36 (36%), Positives = 13/36 (36%)
Frame = +2
Query: 455 PPPXGXXGXXXXPPPPPRXXKNXGXPRXGGXXXXPP 562
PPP G G PPPP P G PP
Sbjct: 1151 PPPVGGLGGPPAPPPPAGFRGGTPPPNAHGGVAPPP 1186
Score = 29.5 bits (63), Expect = 3.7
Identities = 13/35 (37%), Positives = 13/35 (37%)
Frame = +2
Query: 458 PPXGXXGXXXXPPPPPRXXKNXGXPRXGGXXXXPP 562
PP G PPPPPR G P PP
Sbjct: 1174 PPPNAHGGVAPPPPPPRGHGGVGGPPTPPGAPAPP 1208
>08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,
33643-34147,34250-34358,34436-34548,34619-34806,
35481-36129,36169-36691,36760-36911,37042-37141,
37301-37416
Length = 1530
Score = 29.1 bits (62), Expect = 4.9
Identities = 13/37 (35%), Positives = 14/37 (37%)
Frame = +2
Query: 773 PPQNPPPXPFXXPXXXLRXXXPXPXPPGRXXPXPXNP 883
PP PPP P P P PP P P +P
Sbjct: 1181 PPPPPPPLPSGPPPQPAPPPLPIQPPPIPPPPVPSSP 1217
>07_01_0080 + 587674-588510
Length = 278
Score = 29.1 bits (62), Expect = 4.9
Identities = 13/36 (36%), Positives = 14/36 (38%)
Frame = +2
Query: 455 PPPXGXXGXXXXPPPPPRXXKNXGXPRXGGXXXXPP 562
PP G G PPPPP + G P PP
Sbjct: 79 PPRLGGDGMFRRPPPPPPPPPSSGSPPPPPPPPPPP 114
>01_05_0490 + 22672241-22674679
Length = 812
Score = 29.1 bits (62), Expect = 4.9
Identities = 15/37 (40%), Positives = 15/37 (40%)
Frame = +2
Query: 773 PPQNPPPXPFXXPXXXLRXXXPXPXPPGRXXPXPXNP 883
PPQ PPP P R P PP R P P P
Sbjct: 638 PPQPPPPPP-----PTTRRSRKPPQPPSRPAPPPPPP 669
>12_02_1174 - 26696869-26698191
Length = 440
Score = 28.7 bits (61), Expect = 6.5
Identities = 13/37 (35%), Positives = 13/37 (35%)
Frame = +2
Query: 773 PPQNPPPXPFXXPXXXLRXXXPXPXPPGRXXPXPXNP 883
PP PPP P P P P PP P P
Sbjct: 187 PPSPPPPPPTRPPSVKPPVVQPKPQPPPTLPPPSPPP 223
>11_01_0035 -
256087-256185,256287-256430,256521-256632,256777-256958,
257038-257169,257297-258589,259133-259837,260465-260549,
260604-260650,260810-260900,261838-262101,262195-262309,
262455-262570,262713-262847,262969-263036,263292-263411
Length = 1235
Score = 28.7 bits (61), Expect = 6.5
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +2
Query: 455 PPPXGXXGXXXXPPPPP 505
PPP G G PPPPP
Sbjct: 932 PPPPGKPGGPPPPPPPP 948
>01_06_1678 -
39095986-39096205,39096400-39096477,39096578-39096949,
39097374-39097671,39097867-39098077,39098331-39099023
Length = 623
Score = 28.7 bits (61), Expect = 6.5
Identities = 14/34 (41%), Positives = 16/34 (47%)
Frame = +2
Query: 773 PPQNPPPXPFXXPXXXLRXXXPXPXPPGRXXPXP 874
PP++PPP P P P P PP R P P
Sbjct: 127 PPEDPPPHPPHPPDH------PPPPPPCRVPPPP 154
>01_06_1670 -
39007402-39008229,39008320-39008567,39009159-39009364,
39009454-39011054
Length = 960
Score = 28.7 bits (61), Expect = 6.5
Identities = 15/37 (40%), Positives = 15/37 (40%)
Frame = +2
Query: 773 PPQNPPPXPFXXPXXXLRXXXPXPXPPGRXXPXPXNP 883
PP PPP PF P P PP R P P P
Sbjct: 354 PPAPPPPPPFAPTL-------PPPPPPRRKPPSPSPP 383
>09_04_0180 + 15367737-15367755,15368874-15369739
Length = 294
Score = 28.3 bits (60), Expect = 8.6
Identities = 12/33 (36%), Positives = 13/33 (39%)
Frame = +2
Query: 776 PQNPPPXPFXXPXXXLRXXXPXPXPPGRXXPXP 874
P+ PPP P P R P P P P P
Sbjct: 129 PEPPPPRPMPIPTPSPRPRPPDPEPKPDPEPDP 161
>08_01_0539 +
4679392-4681282,4682060-4682104,4682403-4683560,
4683834-4684204,4684290-4684835,4684927-4685027,
4685117-4685933,4686025-4686213,4686313-4686384,
4686477-4686587,4686647-4686652,4686694-4686794,
4687714-4687813,4687891-4687986,4688157-4688273,
4688367-4688492,4688566-4688619,4688745-4688992,
4689087-4689195,4689284-4689583,4689799-4689963
Length = 2240
Score = 28.3 bits (60), Expect = 8.6
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +2
Query: 773 PPQNPPPXPFXXPXXXLRXXXPXPXPP 853
PP PPP P P L P P PP
Sbjct: 428 PPLPPPPPPPPPPPPPLPPNMPPPLPP 454
>03_02_0514 +
9038606-9039790,9040211-9040432,9040548-9040655,
9041608-9041802,9041905-9042153,9042525-9042672,
9042673-9042779,9043311-9043475,9044506-9045948
Length = 1273
Score = 28.3 bits (60), Expect = 8.6
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = -3
Query: 882 GFXGXGXXLPGGXGXGXFXLXKXXGXXNGXGGGFW 778
GF G GG G G G G GGGFW
Sbjct: 90 GFGGGAGGPLGGGGGGWGAGGGGGGGGGGGGGGFW 124
>03_02_0071 +
5425722-5427154,5427259-5427464,5428445-5428686,
5428788-5429570
Length = 887
Score = 28.3 bits (60), Expect = 8.6
Identities = 13/36 (36%), Positives = 13/36 (36%)
Frame = +2
Query: 773 PPQNPPPXPFXXPXXXLRXXXPXPXPPGRXXPXPXN 880
PP PPP P P P P PP P N
Sbjct: 353 PPPPPPPPPPPPPKLNTAPKPPPPPPPPPSVPSNNN 388
Score = 24.2 bits (50), Expect(2) = 9.2
Identities = 9/23 (39%), Positives = 10/23 (43%)
Frame = +2
Query: 440 QKKKXPPPXGXXGXXXXPPPPPR 508
Q PPP PPPPP+
Sbjct: 344 QPSNAPPPPPPPPPPPPPPPPPK 366
Score = 22.2 bits (45), Expect(2) = 9.2
Identities = 7/15 (46%), Positives = 8/15 (53%)
Frame = +2
Query: 491 PPPPPRXXKNXGXPR 535
PPPPP N P+
Sbjct: 377 PPPPPSVPSNNNLPK 391
>01_01_0446 +
3321832-3322232,3322398-3322455,3322810-3323748,
3324504-3324654,3324740-3324818,3325826-3325934
Length = 578
Score = 28.3 bits (60), Expect = 8.6
Identities = 14/38 (36%), Positives = 15/38 (39%)
Frame = -2
Query: 601 PPXXXGFLGFPPXXGXXPXPPXPRXAXVFXXAGGGGGG 488
P G+ G P G P P P GGGGGG
Sbjct: 376 PSYDGGYGGRPMPGGGGPGAPPPYHGGGGGGGGGGGGG 413
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,511,116
Number of Sequences: 37544
Number of extensions: 363027
Number of successful extensions: 4098
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1609
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3247
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2495239620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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