Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP04_F_F07
(887 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily a... 32 0.63
AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily a... 32 0.63
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 31 0.83
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 31 0.83
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 31 0.83
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 31 1.1
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 31 1.1
AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical... 31 1.1
AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like pro... 31 1.1
U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical p... 31 1.5
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 31 1.5
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 29 4.4
U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical pr... 29 5.9
AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical... 29 5.9
AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein p... 29 5.9
AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein. 29 5.9
AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical ... 29 5.9
AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated... 29 5.9
AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated... 29 5.9
Z81540-5|CAB04405.2| 946|Caenorhabditis elegans Hypothetical pr... 28 7.8
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 28 7.8
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 28 7.8
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 28 7.8
AL034392-5|CAE17989.1| 134|Caenorhabditis elegans Hypothetical ... 28 7.8
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 28 7.8
AC006696-4|AAF39985.1| 215|Caenorhabditis elegans Hypothetical ... 28 7.8
>AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform b protein.
Length = 774
Score = 31.9 bits (69), Expect = 0.63
Identities = 14/37 (37%), Positives = 15/37 (40%)
Frame = +2
Query: 773 PPQNPPPXPFXXPXXXLRXXXPXPXPPGRXXPXPXNP 883
PP PPP P P P P P R P P +P
Sbjct: 73 PPLPPPPLPLSNPPAKPTPPPPPPKPTIRPPPIPASP 109
>AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform a protein.
Length = 996
Score = 31.9 bits (69), Expect = 0.63
Identities = 14/37 (37%), Positives = 15/37 (40%)
Frame = +2
Query: 773 PPQNPPPXPFXXPXXXLRXXXPXPXPPGRXXPXPXNP 883
PP PPP P P P P P R P P +P
Sbjct: 295 PPLPPPPLPLSNPPAKPTPPPPPPKPTIRPPPIPASP 331
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 31.5 bits (68), Expect = 0.83
Identities = 16/39 (41%), Positives = 16/39 (41%)
Frame = +2
Query: 455 PPPXGXXGXXXXPPPPPRXXKNXGXPRXGGXXXXPPXGG 571
PPP G PPPPP P GG PP GG
Sbjct: 714 PPPPGLPPITGGPPPPP--PPGGLPPITGGPPPPPPPGG 750
Score = 30.7 bits (66), Expect = 1.5
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = -1
Query: 605 GAPPXXGVFRXPPLXGGXXXPPPPAXXP 522
G PP G+ PP+ GG PPPP P
Sbjct: 712 GPPPPPGL---PPITGGPPPPPPPGGLP 736
Score = 29.9 bits (64), Expect = 2.5
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = -1
Query: 605 GAPPXXGVFRXPPLXGGXXXPPPPAXXP 522
G PP PP+ GG PPPP P
Sbjct: 725 GPPPPPPPGGLPPITGGPPPPPPPGGLP 752
Score = 29.1 bits (62), Expect = 4.4
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = -1
Query: 605 GAPPXXGVFRXPPLXGGXXXPPPPAXXPG 519
G PP G PP G PPPP PG
Sbjct: 750 GLPPISGGPPPPPPPPGGCPPPPPPPPPG 778
Score = 29.1 bits (62), Expect = 4.4
Identities = 12/32 (37%), Positives = 13/32 (40%)
Frame = +2
Query: 773 PPQNPPPXPFXXPXXXLRXXXPXPXPPGRXXP 868
PP PP P P + P P PPG P
Sbjct: 764 PPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAP 795
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 31.5 bits (68), Expect = 0.83
Identities = 16/39 (41%), Positives = 16/39 (41%)
Frame = +2
Query: 455 PPPXGXXGXXXXPPPPPRXXKNXGXPRXGGXXXXPPXGG 571
PPP G PPPPP P GG PP GG
Sbjct: 714 PPPPGLPPITGGPPPPP--PPGGLPPITGGPPPPPPPGG 750
Score = 30.7 bits (66), Expect = 1.5
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = -1
Query: 605 GAPPXXGVFRXPPLXGGXXXPPPPAXXP 522
G PP G+ PP+ GG PPPP P
Sbjct: 712 GPPPPPGL---PPITGGPPPPPPPGGLP 736
Score = 29.9 bits (64), Expect = 2.5
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = -1
Query: 605 GAPPXXGVFRXPPLXGGXXXPPPPAXXP 522
G PP PP+ GG PPPP P
Sbjct: 725 GPPPPPPPGGLPPITGGPPPPPPPGGLP 752
Score = 29.1 bits (62), Expect = 4.4
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = -1
Query: 605 GAPPXXGVFRXPPLXGGXXXPPPPAXXPG 519
G PP G PP G PPPP PG
Sbjct: 750 GLPPISGGPPPPPPPPGGCPPPPPPPPPG 778
Score = 29.1 bits (62), Expect = 4.4
Identities = 12/32 (37%), Positives = 13/32 (40%)
Frame = +2
Query: 773 PPQNPPPXPFXXPXXXLRXXXPXPXPPGRXXP 868
PP PP P P + P P PPG P
Sbjct: 764 PPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAP 795
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 31.5 bits (68), Expect = 0.83
Identities = 16/39 (41%), Positives = 16/39 (41%)
Frame = +2
Query: 455 PPPXGXXGXXXXPPPPPRXXKNXGXPRXGGXXXXPPXGG 571
PPP G PPPPP P GG PP GG
Sbjct: 297 PPPPGLPPITGGPPPPP--PPGGLPPITGGPPPPPPPGG 333
Score = 30.7 bits (66), Expect = 1.5
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = -1
Query: 605 GAPPXXGVFRXPPLXGGXXXPPPPAXXP 522
G PP G+ PP+ GG PPPP P
Sbjct: 295 GPPPPPGL---PPITGGPPPPPPPGGLP 319
Score = 29.9 bits (64), Expect = 2.5
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = -1
Query: 605 GAPPXXGVFRXPPLXGGXXXPPPPAXXP 522
G PP PP+ GG PPPP P
Sbjct: 308 GPPPPPPPGGLPPITGGPPPPPPPGGLP 335
Score = 29.1 bits (62), Expect = 4.4
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = -1
Query: 605 GAPPXXGVFRXPPLXGGXXXPPPPAXXPG 519
G PP G PP G PPPP PG
Sbjct: 333 GLPPISGGPPPPPPPPGGCPPPPPPPPPG 361
Score = 29.1 bits (62), Expect = 4.4
Identities = 12/32 (37%), Positives = 13/32 (40%)
Frame = +2
Query: 773 PPQNPPPXPFXXPXXXLRXXXPXPXPPGRXXP 868
PP PP P P + P P PPG P
Sbjct: 347 PPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAP 378
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 31.1 bits (67), Expect = 1.1
Identities = 17/41 (41%), Positives = 17/41 (41%), Gaps = 3/41 (7%)
Frame = +2
Query: 455 PPPX---GXXGXXXXPPPPPRXXKNXGXPRXGGXXXXPPXG 568
PPP G G PPPPP G P GG PP G
Sbjct: 302 PPPGRTPGPPGMPGMPPPPP--PSRFGPPGMGGMPPPPPPG 340
Score = 29.5 bits (63), Expect = 3.4
Identities = 14/36 (38%), Positives = 15/36 (41%)
Frame = +2
Query: 455 PPPXGXXGXXXXPPPPPRXXKNXGXPRXGGXXXXPP 562
PPP G PPPPP + G P G PP
Sbjct: 287 PPPPPSSGMWP-PPPPPPPGRTPGPPGMPGMPPPPP 321
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 31.1 bits (67), Expect = 1.1
Identities = 17/41 (41%), Positives = 17/41 (41%), Gaps = 3/41 (7%)
Frame = +2
Query: 455 PPPX---GXXGXXXXPPPPPRXXKNXGXPRXGGXXXXPPXG 568
PPP G G PPPPP G P GG PP G
Sbjct: 312 PPPGRTPGPPGMPGMPPPPP--PSRFGPPGMGGMPPPPPPG 350
Score = 29.5 bits (63), Expect = 3.4
Identities = 14/36 (38%), Positives = 15/36 (41%)
Frame = +2
Query: 455 PPPXGXXGXXXXPPPPPRXXKNXGXPRXGGXXXXPP 562
PPP G PPPPP + G P G PP
Sbjct: 297 PPPPPSSGMWP-PPPPPPPGRTPGPPGMPGMPPPPP 331
>AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical
protein Y113G7B.23 protein.
Length = 789
Score = 31.1 bits (67), Expect = 1.1
Identities = 14/44 (31%), Positives = 19/44 (43%)
Frame = +2
Query: 437 SQKKKXPPPXGXXGXXXXPPPPPRXXKNXGXPRXGGXXXXPPXG 568
+Q+ + G G PPPPP+ + G P G PP G
Sbjct: 662 AQQAQSQAHYGPPGGGQGPPPPPQGQQYYGGPPPPGQPYGPPGG 705
>AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like
protein protein.
Length = 789
Score = 31.1 bits (67), Expect = 1.1
Identities = 14/44 (31%), Positives = 19/44 (43%)
Frame = +2
Query: 437 SQKKKXPPPXGXXGXXXXPPPPPRXXKNXGXPRXGGXXXXPPXG 568
+Q+ + G G PPPPP+ + G P G PP G
Sbjct: 662 AQQAQSQAHYGPPGGGQGPPPPPQGQQYYGGPPPPGQPYGPPGG 705
>U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical
protein F25B5.7c protein.
Length = 282
Score = 30.7 bits (66), Expect = 1.5
Identities = 18/49 (36%), Positives = 20/49 (40%)
Frame = -1
Query: 665 GGXFXGXXPFGGXFRGNVFLGAPPXXGVFRXPPLXGGXXXPPPPAXXPG 519
GG G G G+ +G PP G PP GG PPP PG
Sbjct: 161 GGDPRGPPGGMGGPPGHGGMGGPPGHGGQGGPPGHGGMGGPPPGQGGPG 209
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 30.7 bits (66), Expect = 1.5
Identities = 18/49 (36%), Positives = 20/49 (40%)
Frame = -1
Query: 665 GGXFXGXXPFGGXFRGNVFLGAPPXXGVFRXPPLXGGXXXPPPPAXXPG 519
GG G G G+ +G PP G PP GG PPP PG
Sbjct: 441 GGDPRGPPGGMGGPPGHGGMGGPPGHGGQGGPPGHGGMGGPPPGQGGPG 489
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 29.1 bits (62), Expect = 4.4
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = -2
Query: 613 FFWGPPXXXGFLGFPPXXGXXPXPP 539
FF PP GF+ PP G P PP
Sbjct: 63 FFIPPPVPNGFIPPPPGPGGIPPPP 87
Score = 28.3 bits (60), Expect = 7.8
Identities = 15/49 (30%), Positives = 19/49 (38%)
Frame = -1
Query: 677 FFXPGGXFXGXXPFGGXFRGNVFLGAPPXXGVFRXPPLXGGXXXPPPPA 531
F P G P F G + P G+ PP+ G PPPP+
Sbjct: 73 FIPPPPGPGGIPPPPPMFAGGIPPPPPMMGGIPPPPPMFGAPPPPPPPS 121
>U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical
protein C50F7.5 protein.
Length = 309
Score = 28.7 bits (61), Expect = 5.9
Identities = 13/37 (35%), Positives = 14/37 (37%)
Frame = +2
Query: 773 PPQNPPPXPFXXPXXXLRXXXPXPXPPGRXXPXPXNP 883
P + PP P P R P PP R P P P
Sbjct: 238 PSPSDPPGPPGPPGPPTRRPPGPPGPPTRRPPGPPGP 274
>AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical
protein Y116A8C.32 protein.
Length = 699
Score = 28.7 bits (61), Expect = 5.9
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +2
Query: 455 PPPXGXXGXXXXPPPPP 505
PPP G G PPPPP
Sbjct: 664 PPPGGLGGFMPPPPPPP 680
>AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein
protein.
Length = 699
Score = 28.7 bits (61), Expect = 5.9
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +2
Query: 455 PPPXGXXGXXXXPPPPP 505
PPP G G PPPPP
Sbjct: 664 PPPGGLGGFMPPPPPPP 680
>AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein.
Length = 468
Score = 28.7 bits (61), Expect = 5.9
Identities = 17/43 (39%), Positives = 19/43 (44%)
Frame = -1
Query: 641 PFGGXFRGNVFLGAPPXXGVFRXPPLXGGXXXPPPPAXXPGFL 513
P GG N GAPP + PP+ G PPPP P L
Sbjct: 221 PIGGIAPVNAH-GAPPPPPL---PPVGAGAPPPPPPPPPPAQL 259
>AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical
protein T20B6.3 protein.
Length = 259
Score = 28.7 bits (61), Expect = 5.9
Identities = 15/37 (40%), Positives = 16/37 (43%)
Frame = -3
Query: 882 GFXGXGXXLPGGXGXGXFXLXKXXGXXNGXGGGFWGG 772
G G G GG G G F G G GGG +GG
Sbjct: 171 GGGGYGGGGDGGYGGGGFGGGGMGGYGGGMGGGGYGG 207
>AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated
protein 34, isoform b protein.
Length = 310
Score = 28.7 bits (61), Expect = 5.9
Identities = 17/43 (39%), Positives = 19/43 (44%)
Frame = -1
Query: 641 PFGGXFRGNVFLGAPPXXGVFRXPPLXGGXXXPPPPAXXPGFL 513
P GG N GAPP + PP+ G PPPP P L
Sbjct: 207 PIGGIAPVNAH-GAPPPPPL---PPVGAGAPPPPPPPPPPAQL 245
>AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated
protein 34, isoform a protein.
Length = 454
Score = 28.7 bits (61), Expect = 5.9
Identities = 17/43 (39%), Positives = 19/43 (44%)
Frame = -1
Query: 641 PFGGXFRGNVFLGAPPXXGVFRXPPLXGGXXXPPPPAXXPGFL 513
P GG N GAPP + PP+ G PPPP P L
Sbjct: 207 PIGGIAPVNAH-GAPPPPPL---PPVGAGAPPPPPPPPPPAQL 245
>Z81540-5|CAB04405.2| 946|Caenorhabditis elegans Hypothetical
protein F46B3.5 protein.
Length = 946
Score = 28.3 bits (60), Expect = 7.8
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = -2
Query: 571 PPXXGXXPXPPXPRXAXVFXXAGGGGGG 488
P P PP A F GGGGGG
Sbjct: 714 PQFVAVAPVPPPVAPAVAFAGGGGGGGG 741
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical
protein C34D4.11 protein.
Length = 136
Score = 28.3 bits (60), Expect = 7.8
Identities = 13/37 (35%), Positives = 16/37 (43%)
Frame = -3
Query: 882 GFXGXGXXLPGGXGXGXFXLXKXXGXXNGXGGGFWGG 772
G+ G G G G + + G N GGG WGG
Sbjct: 47 GWGGGGPGWGRGGGGSGWGGGRGGGWGNNGGGGNWGG 83
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 28.3 bits (60), Expect = 7.8
Identities = 11/27 (40%), Positives = 11/27 (40%)
Frame = +2
Query: 773 PPQNPPPXPFXXPXXXLRXXXPXPXPP 853
PP PPP P P P P PP
Sbjct: 630 PPPPPPPPPMGLPAVGAGAPPPPPPPP 656
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 28.3 bits (60), Expect = 7.8
Identities = 11/27 (40%), Positives = 11/27 (40%)
Frame = +2
Query: 773 PPQNPPPXPFXXPXXXLRXXXPXPXPP 853
PP PPP P P P P PP
Sbjct: 456 PPPPPPPPPMGLPAVGAGAPPPPPPPP 482
>AL034392-5|CAE17989.1| 134|Caenorhabditis elegans Hypothetical
protein Y40B1A.5 protein.
Length = 134
Score = 28.3 bits (60), Expect = 7.8
Identities = 13/31 (41%), Positives = 15/31 (48%), Gaps = 1/31 (3%)
Frame = -2
Query: 622 GEMFFWGPPXXXGF-LGFPPXXGXXPXPPXP 533
G F GPP + L +PP G P PP P
Sbjct: 70 GMPFMGGPPPHHQYHLQYPPPHGLGPPPPPP 100
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 28.3 bits (60), Expect = 7.8
Identities = 16/39 (41%), Positives = 16/39 (41%)
Frame = -3
Query: 570 PPXGGXXXXPPXRGXPXFFXXRGGGGGXXXXPXXPXGGG 454
PP GG PP P F RGG GG GGG
Sbjct: 773 PPRGGMHHMPPP---PSFRGGRGGHGGPPPPHFDRRGGG 808
>AC006696-4|AAF39985.1| 215|Caenorhabditis elegans Hypothetical
protein W08E12.6 protein.
Length = 215
Score = 28.3 bits (60), Expect = 7.8
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = -1
Query: 605 GAPPXXGVFRXPPLXGGXXXPPPPA 531
G PP G PP G PPPPA
Sbjct: 142 GPPPCFGPACPPPCFGPACAPPPPA 166
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,039,271
Number of Sequences: 27780
Number of extensions: 192069
Number of successful extensions: 1978
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 650
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1607
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2244863852
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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