Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP04_F_F06
         (886 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            27   1.0  

>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 26.6 bits (56), Expect = 1.0
 Identities = 9/15 (60%), Positives = 9/15 (60%)
 Frame = +2

Query: 614 PPXXXXXPPPXGPPP 658
           PP     PPP GPPP
Sbjct: 581 PPPAPPPPPPMGPPP 595



 Score = 23.8 bits (49), Expect = 7.1
 Identities = 17/69 (24%), Positives = 18/69 (26%)
 Frame = +3

Query: 480 GPPPPPXXXXXXXXXXXXXXXXXXXXXXXPPXXLXXFXLKKXXXPXPXXCXXPPXXXPPP 659
           GPPPPP                       P   L    L+            PP   PPP
Sbjct: 529 GPPPPPPPGGAVLNIPPQFLPPPLNLLRAPFFPLNPAQLRFPAGFPNLPNAQPPPAPPPP 588

Query: 660 PXNKXXPXP 686
           P     P P
Sbjct: 589 PPMGPPPSP 597



 Score = 23.4 bits (48), Expect = 9.4
 Identities = 10/27 (37%), Positives = 10/27 (37%)
 Frame = +1

Query: 613 PXLXXVSPPPXXXPPPQXIKXXPPXXG 693
           P L    PPP   PPP       P  G
Sbjct: 574 PNLPNAQPPPAPPPPPPMGPPPSPLAG 600


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 394,835
Number of Sequences: 2352
Number of extensions: 5014
Number of successful extensions: 14
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 95093730
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)