Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP04_F_F01
         (886 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    27   1.0  
AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic acetylch...    25   3.1  
AF458073-1|AAL68639.1|  166|Anopheles gambiae D7-related 5 prote...    25   3.1  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            23   9.4  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            23   9.4  
AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic acetylch...    23   9.4  
AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic acetylch...    23   9.4  
AY324310-1|AAQ89695.1|  160|Anopheles gambiae insulin-like pepti...    23   9.4  

>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
           polyprotein protein.
          Length = 1726

 Score = 26.6 bits (56), Expect = 1.0
 Identities = 16/36 (44%), Positives = 20/36 (55%)
 Frame = +1

Query: 448 INDSVKVIPTPGHTQSDVTVIATTRRGEAIAITGDL 555
           +ND +KV PT    Q D T I    R  AIA+ GD+
Sbjct: 761 LNDILKVGPT---IQQDTTDILLRWRRRAIAVVGDV 793


>AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 3 protein.
          Length = 710

 Score = 25.0 bits (52), Expect = 3.1
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = -1

Query: 643 SICSSFAVLGLHFQLPTKY*DFQYLHVFQINH 548
           SIC +  VL +HF+ P  +    ++    INH
Sbjct: 316 SICVTVIVLNIHFRSPQTHTMAPWVRTIFINH 347


>AF458073-1|AAL68639.1|  166|Anopheles gambiae D7-related 5 protein
           protein.
          Length = 166

 Score = 25.0 bits (52), Expect = 3.1
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = -3

Query: 545 VIAIASPLLVVAITVTSDCV 486
           VIA+  PL++V     SDCV
Sbjct: 8   VIALICPLIIVETLAVSDCV 27


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 23.4 bits (48), Expect = 9.4
 Identities = 7/23 (30%), Positives = 14/23 (60%)
 Frame = -1

Query: 301 LLQVSFGFVVGHFLSYPHPKLSW 233
           LLQ+    ++ HF  + HP+ ++
Sbjct: 697 LLQIDSNMLINHFKIHSHPRTAY 719


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 23.4 bits (48), Expect = 9.4
 Identities = 7/23 (30%), Positives = 14/23 (60%)
 Frame = -1

Query: 301 LLQVSFGFVVGHFLSYPHPKLSW 233
           LLQ+    ++ HF  + HP+ ++
Sbjct: 698 LLQIDSNMLINHFKIHSHPRTAY 720


>AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 23.4 bits (48), Expect = 9.4
 Identities = 8/23 (34%), Positives = 16/23 (69%)
 Frame = -1

Query: 664 SLLNLRLSICSSFAVLGLHFQLP 596
           +++ + +SIC +  VL +HF+ P
Sbjct: 313 AMILVSISICVTVVVLNVHFRSP 335


>AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 23.4 bits (48), Expect = 9.4
 Identities = 8/23 (34%), Positives = 16/23 (69%)
 Frame = -1

Query: 664 SLLNLRLSICSSFAVLGLHFQLP 596
           +++ + +SIC +  VL +HF+ P
Sbjct: 313 AMILVSISICVTVVVLNVHFRSP 335


>AY324310-1|AAQ89695.1|  160|Anopheles gambiae insulin-like peptide
           4 precursor protein.
          Length = 160

 Score = 23.4 bits (48), Expect = 9.4
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -3

Query: 419 CIKYFSLNDILNPTICF 369
           C++YFSL D+   T+ F
Sbjct: 46  CVEYFSLEDLRKNTVEF 62


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 813,772
Number of Sequences: 2352
Number of extensions: 16803
Number of successful extensions: 33
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 95093730
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)