Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP04_F_E24
(886 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_05_0343 - 24234026-24234235,24234254-24234502,24234642-242349... 92 5e-19
02_01_0516 + 3727742-3727936,3729115-3729192,3729292-3729552,372... 91 1e-18
06_03_1062 - 27293119-27293313,27293390-27293548,27293877-272941... 88 1e-17
01_06_1020 + 33878391-33878582,33879194-33879271,33879363-338795... 79 5e-15
10_08_0167 - 15370890-15371093,15371588-15371686,15371912-153719... 42 7e-04
12_02_0726 - 22552005-22552035,22552507-22552598,22552970-225530... 31 1.6
03_05_0710 + 27038709-27038865,27039205-27039346,27039383-270395... 30 2.8
12_01_0729 - 6468767-6468798,6468880-6469360 28 8.7
09_04_0515 + 18238434-18238545,18238659-18238709,18238844-182388... 28 8.7
>05_05_0343 -
24234026-24234235,24234254-24234502,24234642-24234959,
24235111-24235371,24235457-24235534,24235834-24236262
Length = 514
Score = 92.3 bits (219), Expect = 5e-19
Identities = 48/92 (52%), Positives = 63/92 (68%), Gaps = 2/92 (2%)
Frame = +1
Query: 595 KADPEKVKAFXASLRKLGDVYINDAFGTAHRAHSSMVG--EGFEQRASGFLLKKELQYFA 768
K DPE F L L D+Y+NDAFGTAHRAH+S G + + +GFLL+KEL Y
Sbjct: 207 KNDPE----FAKKLASLADLYVNDAFGTAHRAHASTEGVTKFLKPSVAGFLLQKELDYLV 262
Query: 769 KALHEPERPFLAILGGAKVADKILLIENLLDK 864
A+ P+RPF AI+GG+KV+ KI +IE+LL+K
Sbjct: 263 GAVSSPKRPFAAIVGGSKVSSKIGVIESLLEK 294
Score = 81.4 bits (192), Expect = 9e-16
Identities = 50/121 (41%), Positives = 72/121 (59%), Gaps = 2/121 (1%)
Frame = +2
Query: 131 RQKASKNQK*FNFLLRMALNKLS-IDALNLTGKRVLMRVDFNVPLKEGV-ITNNQRIVAA 304
RQ AS + + + MA + + A +L GKRV +R D NVPL + IT++ R+ AA
Sbjct: 64 RQAASSSSRGTRAVATMAKKSVGDLTAADLEGKRVFVRADLNVPLDDNQNITDDTRVRAA 123
Query: 305 LDSVKYALDKGAKSVVLMSHLGRPDGQVNLKYTLKPVAEELKKLLNKDVTFLTDCIGLEV 484
+ +++Y + GAK V+L SHLGRP G V K++L P+ L +LL VT D IG +V
Sbjct: 124 IPTIQYLIKNGAK-VILSSHLGRPKG-VTPKFSLAPLVPRLSELLGIQVTKAEDVIGPDV 181
Query: 485 E 487
E
Sbjct: 182 E 182
Score = 29.1 bits (62), Expect = 5.0
Identities = 12/19 (63%), Positives = 16/19 (84%)
Frame = +3
Query: 504 LQXGSIILLENLRFHIEEE 560
L GS++LLEN+RF+ EEE
Sbjct: 188 LPNGSVLLLENVRFYKEEE 206
>02_01_0516 +
3727742-3727936,3729115-3729192,3729292-3729552,
3729921-3730238,3730527-3730685,3730768-3730961,
3731644-3731647
Length = 402
Score = 91.1 bits (216), Expect = 1e-18
Identities = 50/97 (51%), Positives = 65/97 (67%), Gaps = 1/97 (1%)
Frame = +2
Query: 212 NLTGKRVLMRVDFNVPLKEGV-ITNNQRIVAALDSVKYALDKGAKSVVLMSHLGRPDGQV 388
+L GK+V +R D NVPL + IT++ RI A++ +VK+ L+KGAK V+L SHLGRP G V
Sbjct: 14 DLRGKKVFVRADLNVPLDDAQKITDDTRIRASVPTVKFLLEKGAK-VILASHLGRPKG-V 71
Query: 389 NLKYTLKPVAEELKKLLNKDVTFLTDCIGLEVETACA 499
KY+LKP+ L +LL DV DCIG EVE A
Sbjct: 72 TPKYSLKPLVPRLSELLGVDVVMANDCIGEEVEKLAA 108
Score = 87.8 bits (208), Expect = 1e-17
Identities = 46/93 (49%), Positives = 63/93 (67%), Gaps = 2/93 (2%)
Frame = +1
Query: 595 KADPEKVKAFXASLRKLGDVYINDAFGTAHRAHSSMVG--EGFEQRASGFLLKKELQYFA 768
K DPE F L + D+Y+NDAFGTAHRAH+S G + + +GFL++KEL Y
Sbjct: 129 KNDPE----FAKKLAAVADLYVNDAFGTAHRAHASTEGVTKFLKPAVAGFLMQKELDYLV 184
Query: 769 KALHEPERPFLAILGGAKVADKILLIENLLDKV 867
A+ P++PF AI+GG+KV+ KI +IE+LL KV
Sbjct: 185 GAVANPKKPFAAIVGGSKVSTKIGVIESLLAKV 217
>06_03_1062 -
27293119-27293313,27293390-27293548,27293877-27294194,
27294535-27294795,27294901-27294978,27295707-27295901
Length = 401
Score = 87.8 bits (208), Expect = 1e-17
Identities = 47/97 (48%), Positives = 64/97 (65%), Gaps = 1/97 (1%)
Frame = +2
Query: 212 NLTGKRVLMRVDFNVPLKEGV-ITNNQRIVAALDSVKYALDKGAKSVVLMSHLGRPDGQV 388
+L GK+V +R D NVPL + IT++ RI A++ ++K+ + KGAK V+L SHLGRP G V
Sbjct: 14 DLKGKKVFLRADLNVPLDDSQKITDDTRIRASVPTIKFLMGKGAK-VILASHLGRPKG-V 71
Query: 389 NLKYTLKPVAEELKKLLNKDVTFLTDCIGLEVETACA 499
KY+LKP+ L +LL DV DCIG EV+ A
Sbjct: 72 TPKYSLKPLVPRLSELLGVDVVMANDCIGEEVQKLAA 108
Score = 87.4 bits (207), Expect = 1e-17
Identities = 46/93 (49%), Positives = 62/93 (66%), Gaps = 2/93 (2%)
Frame = +1
Query: 595 KADPEKVKAFXASLRKLGDVYINDAFGTAHRAHSSMVG--EGFEQRASGFLLKKELQYFA 768
K DPE F L + D+Y+NDAFGTAHRAH+S G + +GFL++KEL Y
Sbjct: 129 KNDPE----FANKLASVADLYVNDAFGTAHRAHASTEGVTKYLRPSVAGFLMQKELDYLV 184
Query: 769 KALHEPERPFLAILGGAKVADKILLIENLLDKV 867
A+ P++PF AI+GG+KV+ KI +IE+LL KV
Sbjct: 185 GAVANPKKPFAAIVGGSKVSTKIGVIESLLAKV 217
>01_06_1020 +
33878391-33878582,33879194-33879271,33879363-33879524,
33879789-33880106,33880477-33880671
Length = 314
Score = 79.0 bits (186), Expect = 5e-15
Identities = 44/95 (46%), Positives = 61/95 (64%), Gaps = 1/95 (1%)
Frame = +2
Query: 206 ALNLTGKRVLMRVDFNVPLKEGV-ITNNQRIVAALDSVKYALDKGAKSVVLMSHLGRPDG 382
A +L GKRVL+R D NVPL IT++ R++AA+ ++K+ + GAK V+L SHLGRP G
Sbjct: 11 AADLEGKRVLLRADLNVPLDASQNITDDTRVIAAIPTIKHLIGNGAK-VILCSHLGRPKG 69
Query: 383 QVNLKYTLKPVAEELKKLLNKDVTFLTDCIGLEVE 487
+ K++L P+ L +LL V D IG EVE
Sbjct: 70 -ITPKFSLAPLVPRLSELLGIQVQKADDVIGPEVE 103
Score = 46.8 bits (106), Expect = 2e-05
Identities = 21/38 (55%), Positives = 29/38 (76%)
Frame = +1
Query: 751 ELQYFAKALHEPERPFLAILGGAKVADKILLIENLLDK 864
EL Y A+ P+RPF AI+GG+KV+ KI +IE+LL+K
Sbjct: 145 ELDYLVGAVSNPKRPFAAIVGGSKVSSKIGVIESLLEK 182
Score = 31.9 bits (69), Expect = 0.70
Identities = 13/26 (50%), Positives = 21/26 (80%)
Frame = +3
Query: 483 LKQHVLILQXGSIILLENLRFHIEEE 560
+++ V +L GS++LLEN+RF+ EEE
Sbjct: 102 VEKSVSVLPNGSVLLLENVRFYKEEE 127
>10_08_0167 -
15370890-15371093,15371588-15371686,15371912-15371996,
15372570-15372619,15372688-15372764,15373282-15373357,
15374103-15374354,15374864-15374931,15375172-15375463,
15376553-15376896,15377517-15377793,15378440-15378506,
15378848-15378900
Length = 647
Score = 41.9 bits (94), Expect = 7e-04
Identities = 25/82 (30%), Positives = 38/82 (46%), Gaps = 2/82 (2%)
Frame = +1
Query: 595 KADPEKVKAFXASLRKLGDVYINDAFGTAHRAHSSMVGEGFEQRAS--GFLLKKELQYFA 768
K + F L +++ND+F +H+ +S VG AS GF ++EL
Sbjct: 175 KGENANCNDFSQKLASGAAIFVNDSFSLSHKMLASTVGITRFCHASLAGFHFEEELMQLR 234
Query: 769 KALHEPERPFLAILGGAKVADK 834
K RPF+AI+GG+ K
Sbjct: 235 KITDTTRRPFIAIIGGSNFLGK 256
>12_02_0726 -
22552005-22552035,22552507-22552598,22552970-22553094,
22553221-22553311,22553475-22553755,22554211-22554394,
22554499-22554583,22554692-22554782,22554909-22555293,
22555457-22555669,22555873-22556418,22556572-22556788,
22556907-22557058,22557519-22557663,22557846-22557907,
22559130-22559291,22559393-22559482,22560055-22560215,
22560907-22560997,22561125-22561308,22561556-22561737,
22561857-22562086,22562622-22562685
Length = 1287
Score = 30.7 bits (66), Expect = 1.6
Identities = 21/72 (29%), Positives = 34/72 (47%)
Frame = +2
Query: 263 KEGVITNNQRIVAALDSVKYALDKGAKSVVLMSHLGRPDGQVNLKYTLKPVAEELKKLLN 442
+ GV+ + + +AAL D AKS + L +G L + P E +K+LN
Sbjct: 601 RHGVVLDGE--IAALFFKHENYDLAAKSYEKVCALYSAEGWEELLADVLPDLAECQKILN 658
Query: 443 KDVTFLTDCIGL 478
+ +LT C+ L
Sbjct: 659 DEAGYLTSCVKL 670
>03_05_0710 +
27038709-27038865,27039205-27039346,27039383-27039558,
27039639-27039703,27040000-27040371,27040429-27040504,
27040505-27040571,27040672-27040825,27041122-27041289,
27041392-27041502,27041612-27041722,27041864-27041881,
27041917-27042018,27042587-27042817,27043390-27043464,
27043744-27043815,27044597-27044782,27044868-27045026,
27045251-27045343,27045730-27045801,27046336-27046426,
27046669-27046847,27047252-27047333,27047526-27047636,
27047715-27047821,27048194-27048271,27048357-27048452,
27048627-27048722,27048839-27048856
Length = 1154
Score = 29.9 bits (64), Expect = 2.8
Identities = 15/52 (28%), Positives = 24/52 (46%)
Frame = +2
Query: 317 KYALDKGAKSVVLMSHLGRPDGQVNLKYTLKPVAEELKKLLNKDVTFLTDCI 472
+Y + V M+H + ++ L +AEE KKLL KD T + +
Sbjct: 687 RYITSSVKSAFVKMAHSVEAKADTSHEHVLASLAEETKKLLKKDTTVFSSVL 738
>12_01_0729 - 6468767-6468798,6468880-6469360
Length = 170
Score = 28.3 bits (60), Expect = 8.7
Identities = 18/72 (25%), Positives = 36/72 (50%)
Frame = +2
Query: 407 KPVAEELKKLLNKDVTFLTDCIGLEVETACADPSXWFNYPTGESSLPH*RGRQRCRCFRV 586
+PVA + +L+KD+ +T+ E E A WF YP E+ L +++ + ++
Sbjct: 59 EPVARDQFGILHKDIIKVTED---EKERAWTALVAWFGYPAEEARLKQKALQKKGKTWKN 115
Query: 587 LK*RLIQKKLKP 622
K + + + + P
Sbjct: 116 FKWKFVSEYIIP 127
>09_04_0515 +
18238434-18238545,18238659-18238709,18238844-18238897,
18239727-18239777,18239845-18239895,18240056-18240210,
18240550-18240663,18240873-18240938,18241478-18241561,
18241640-18241726,18241975-18242066,18242163-18242223,
18242475-18242531,18243129-18243220,18243394-18243584,
18244203-18244321,18244518-18244589,18244699-18244784,
18244866-18244962,18245488-18245622
Length = 608
Score = 28.3 bits (60), Expect = 8.7
Identities = 15/61 (24%), Positives = 33/61 (54%)
Frame = +2
Query: 281 NNQRIVAALDSVKYALDKGAKSVVLMSHLGRPDGQVNLKYTLKPVAEELKKLLNKDVTFL 460
++ R VAA+ ++ ++KG V L++ G G+ + Y + + ++ L N+D+ +
Sbjct: 102 SHHRAVAAVRLLR--IEKGKAFVDLLNEKGNSSGENEMSYVERTLGFSIRCLDNRDIRLV 159
Query: 461 T 463
T
Sbjct: 160 T 160
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,661,262
Number of Sequences: 37544
Number of extensions: 397773
Number of successful extensions: 975
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 938
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 968
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2503236492
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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