Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP04_F_E21
         (886 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein.             24   5.4  
AY263175-1|AAP78790.1|  814|Anopheles gambiae TmcA-like protein ...    24   7.1  
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript...    23   9.4  

>X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein.
          Length = 1231

 Score = 24.2 bits (50), Expect = 5.4
 Identities = 10/17 (58%), Positives = 11/17 (64%)
 Frame = +3

Query: 393 EVIKKLFTKEKSPDGPP 443
           E +K L T E SP GPP
Sbjct: 99  EAVKHLQTPEGSPTGPP 115


>AY263175-1|AAP78790.1|  814|Anopheles gambiae TmcA-like protein
           protein.
          Length = 814

 Score = 23.8 bits (49), Expect = 7.1
 Identities = 19/64 (29%), Positives = 29/64 (45%)
 Frame = -1

Query: 742 RVFGCLRCLLSHPSCSQKSLQNNSPFVVCLYVLFLPAAKPVFHIAVLMFYPIQLDFPADN 563
           R +  L C + H    + S  NN  F + L +LFL    PV + A++   P     P  N
Sbjct: 578 RSWTVLTCNVPHEVVFRASRSNNFYFALLLTMLFL-CVLPVSY-AIVFLEPSWHCGPFSN 635

Query: 562 SEQL 551
           S ++
Sbjct: 636 SNRI 639


>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1173

 Score = 23.4 bits (48), Expect = 9.4
 Identities = 13/56 (23%), Positives = 23/56 (41%)
 Frame = +1

Query: 640  EIERINKLQMESYFEEIFENKMDDSAGNANNRKHVDNXFTSEVSFAKPEYGKKAYT 807
            E +R  + +M   ++    N  DD   +  NR+  +   TSE +    E  +   T
Sbjct: 1103 ERQRAARAEMHGAYQPAPSNDSDDDDDDVENRQATNAASTSEAARTAAEESRVGLT 1158


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 761,520
Number of Sequences: 2352
Number of extensions: 14144
Number of successful extensions: 31
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 95093730
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)