Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP04_F_E21
(886 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT021290-1|AAX33438.1| 985|Drosophila melanogaster RE31401p pro... 67 3e-11
AE014298-785|AAF46074.1| 985|Drosophila melanogaster CG4078-PA ... 67 3e-11
AY058540-1|AAL13769.1| 861|Drosophila melanogaster LD24267p pro... 52 1e-06
AL121806-14|CAB58099.1| 861|Drosophila melanogaster EG:33C11.2 ... 52 1e-06
AE014298-169|AAF45598.1| 861|Drosophila melanogaster CG11403-PA... 52 1e-06
AE013599-3149|AAM70857.2| 769|Drosophila melanogaster CG9433-PA... 39 0.008
AF132140-1|AAD33587.1| 745|Drosophila melanogaster excision rep... 36 0.098
AE013599-3150|AAF46689.1| 745|Drosophila melanogaster CG9433-PB... 36 0.098
BT021222-1|AAX33370.1| 822|Drosophila melanogaster RH55640p pro... 33 0.69
AY060822-1|AAL28370.1| 641|Drosophila melanogaster GM01081p pro... 33 0.69
AE014134-2947|AAF53680.2| 822|Drosophila melanogaster CG10333-P... 33 0.69
AY084210-1|AAL89948.1| 831|Drosophila melanogaster SD08336p pro... 31 1.6
BT024213-1|ABC86275.1| 1354|Drosophila melanogaster RE29404p pro... 31 2.8
AE014297-634|AAF53998.3| 1354|Drosophila melanogaster CG31146-PD... 31 2.8
AE014134-887|AAZ66448.1| 9606|Drosophila melanogaster CG33715-PE... 31 2.8
AY060980-1|AAL28528.1| 237|Drosophila melanogaster GM13219p pro... 30 3.7
AE014297-4073|AAF56670.2| 381|Drosophila melanogaster CG5880-PA... 30 3.7
Y12322-1|CAA72991.1| 1191|Drosophila melanogaster u-shaped protein. 29 6.5
BT015278-1|AAT94507.1| 1191|Drosophila melanogaster LD12631p pro... 29 6.5
AE014134-116|AAF51488.2| 1191|Drosophila melanogaster CG2762-PA ... 29 6.5
AY071291-1|AAL48913.1| 535|Drosophila melanogaster RE31829p pro... 29 8.5
>BT021290-1|AAX33438.1| 985|Drosophila melanogaster RE31401p
protein.
Length = 985
Score = 67.3 bits (157), Expect = 3e-11
Identities = 28/57 (49%), Positives = 42/57 (73%)
Frame = +1
Query: 466 MIAGVKVNLPVNPYGTQKALIHQVIKTIKAAQNCLLESPTGSGKTLALLCGTLAWLQ 636
+IAG+ V+ P PY Q+A + +VI ++ N +LESPTG+GKTL+LLC +LAW++
Sbjct: 5 LIAGIPVHFPFEPYPVQRAYMEKVIHCLRDGTNGVLESPTGTGKTLSLLCSSLAWIR 61
>AE014298-785|AAF46074.1| 985|Drosophila melanogaster CG4078-PA
protein.
Length = 985
Score = 67.3 bits (157), Expect = 3e-11
Identities = 28/57 (49%), Positives = 42/57 (73%)
Frame = +1
Query: 466 MIAGVKVNLPVNPYGTQKALIHQVIKTIKAAQNCLLESPTGSGKTLALLCGTLAWLQ 636
+IAG+ V+ P PY Q+A + +VI ++ N +LESPTG+GKTL+LLC +LAW++
Sbjct: 5 LIAGIPVHFPFEPYPVQRAYMEKVIHCLRDGTNGVLESPTGTGKTLSLLCSSLAWIR 61
>AY058540-1|AAL13769.1| 861|Drosophila melanogaster LD24267p
protein.
Length = 861
Score = 51.6 bits (118), Expect = 1e-06
Identities = 23/59 (38%), Positives = 37/59 (62%)
Frame = +1
Query: 493 PVNPYGTQKALIHQVIKTIKAAQNCLLESPTGSGKTLALLCGTLAWLQAEIERINKLQM 669
P +PY Q+ L+ ++ + ++ Q + ESPTG+GK+L L CG L WL A E + + +M
Sbjct: 21 PYSPYEIQEQLMQELFQVLERGQVGIFESPTGTGKSLTLTCGALTWL-ARHEELVRTEM 78
>AL121806-14|CAB58099.1| 861|Drosophila melanogaster EG:33C11.2
protein.
Length = 861
Score = 51.6 bits (118), Expect = 1e-06
Identities = 23/59 (38%), Positives = 37/59 (62%)
Frame = +1
Query: 493 PVNPYGTQKALIHQVIKTIKAAQNCLLESPTGSGKTLALLCGTLAWLQAEIERINKLQM 669
P +PY Q+ L+ ++ + ++ Q + ESPTG+GK+L L CG L WL A E + + +M
Sbjct: 21 PYSPYEIQEQLMQELFQVLERGQVGIFESPTGTGKSLTLTCGALTWL-ARHEELVRTEM 78
>AE014298-169|AAF45598.1| 861|Drosophila melanogaster CG11403-PA
protein.
Length = 861
Score = 51.6 bits (118), Expect = 1e-06
Identities = 23/59 (38%), Positives = 37/59 (62%)
Frame = +1
Query: 493 PVNPYGTQKALIHQVIKTIKAAQNCLLESPTGSGKTLALLCGTLAWLQAEIERINKLQM 669
P +PY Q+ L+ ++ + ++ Q + ESPTG+GK+L L CG L WL A E + + +M
Sbjct: 21 PYSPYEIQEQLMQELFQVLERGQVGIFESPTGTGKSLTLTCGALTWL-ARHEELVRTEM 78
>AE013599-3149|AAM70857.2| 769|Drosophila melanogaster CG9433-PA,
isoform A protein.
Length = 769
Score = 39.1 bits (87), Expect = 0.008
Identities = 22/68 (32%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Frame = +1
Query: 463 IMIAGVKVNLPVNP-YGTQKALIHQVIKTIKAAQNCLLESPTGSGKTLALLCGTLAWLQA 639
+ + G+ V P Y Q A + ++ +++ A +CLLE P+G+GKT LL +A++
Sbjct: 3 LSVDGLLVYFPYEYIYPEQYAYMLELKRSLDAKGHCLLEMPSGTGKTATLLSLIVAYMVE 62
Query: 640 EIERINKL 663
E + KL
Sbjct: 63 HPETVRKL 70
>AF132140-1|AAD33587.1| 745|Drosophila melanogaster excision repair
protein ERCC2/XPD protein.
Length = 745
Score = 35.5 bits (78), Expect = 0.098
Identities = 16/41 (39%), Positives = 26/41 (63%)
Frame = +1
Query: 541 KTIKAAQNCLLESPTGSGKTLALLCGTLAWLQAEIERINKL 663
+++ A +CLLE P+G+GKT LL +A++ E + KL
Sbjct: 6 RSLDAKGHCLLEMPSGTGKTATLLSLIVAYMVEHPETVRKL 46
>AE013599-3150|AAF46689.1| 745|Drosophila melanogaster CG9433-PB,
isoform B protein.
Length = 745
Score = 35.5 bits (78), Expect = 0.098
Identities = 16/41 (39%), Positives = 26/41 (63%)
Frame = +1
Query: 541 KTIKAAQNCLLESPTGSGKTLALLCGTLAWLQAEIERINKL 663
+++ A +CLLE P+G+GKT LL +A++ E + KL
Sbjct: 6 RSLDAKGHCLLEMPSGTGKTATLLSLIVAYMVEHPETVRKL 46
>BT021222-1|AAX33370.1| 822|Drosophila melanogaster RH55640p
protein.
Length = 822
Score = 32.7 bits (71), Expect = 0.69
Identities = 16/34 (47%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = +1
Query: 583 TGSGKTLALLCGTLAWLQA--EIERINKLQMESY 678
TGSGKTLA L L+W+Q+ +IER+ + Y
Sbjct: 440 TGSGKTLAFLIPLLSWIQSLPKIERLEDVDQGPY 473
>AY060822-1|AAL28370.1| 641|Drosophila melanogaster GM01081p
protein.
Length = 641
Score = 32.7 bits (71), Expect = 0.69
Identities = 16/34 (47%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = +1
Query: 583 TGSGKTLALLCGTLAWLQA--EIERINKLQMESY 678
TGSGKTLA L L+W+Q+ +IER+ + Y
Sbjct: 259 TGSGKTLAFLIPLLSWIQSLPKIERLEDVDQGPY 292
>AE014134-2947|AAF53680.2| 822|Drosophila melanogaster CG10333-PA
protein.
Length = 822
Score = 32.7 bits (71), Expect = 0.69
Identities = 16/34 (47%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = +1
Query: 583 TGSGKTLALLCGTLAWLQA--EIERINKLQMESY 678
TGSGKTLA L L+W+Q+ +IER+ + Y
Sbjct: 440 TGSGKTLAFLIPLLSWIQSLPKIERLEDVDQGPY 473
>AY084210-1|AAL89948.1| 831|Drosophila melanogaster SD08336p
protein.
Length = 831
Score = 31.5 bits (68), Expect = 1.6
Identities = 17/48 (35%), Positives = 28/48 (58%)
Frame = +1
Query: 553 AAQNCLLESPTGSGKTLALLCGTLAWLQAEIERINKLQMESYFEEIFE 696
A++ +L+ G G +LAL G L L+AEI R +L+++ EI +
Sbjct: 775 ASEETILKQVNGDGLSLALSNGDLDTLKAEIVREMRLEIQKVKNEIID 822
>BT024213-1|ABC86275.1| 1354|Drosophila melanogaster RE29404p
protein.
Length = 1354
Score = 30.7 bits (66), Expect = 2.8
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
Frame = -1
Query: 697 SQKSLQNNSPFVVCL-YVLFLPAAKPVFHIAVLMFYPIQLDFPADN-SEQLLWSLLPDVS 524
S+ +L +S C+ Y++ P A +FH A+LM D+ A N S QL + +
Sbjct: 358 SRVTLMGHSTGAACVNYLMVSPVASGLFHRAILMSGSAMSDWAASNQSLQLTMQIAHALE 417
Query: 523 TPSESH 506
P H
Sbjct: 418 CPLNEH 423
>AE014297-634|AAF53998.3| 1354|Drosophila melanogaster CG31146-PD
protein.
Length = 1354
Score = 30.7 bits (66), Expect = 2.8
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
Frame = -1
Query: 697 SQKSLQNNSPFVVCL-YVLFLPAAKPVFHIAVLMFYPIQLDFPADN-SEQLLWSLLPDVS 524
S+ +L +S C+ Y++ P A +FH A+LM D+ A N S QL + +
Sbjct: 358 SRVTLMGHSTGAACVNYLMVSPVASGLFHRAILMSGSAMSDWAASNQSLQLTMQIAHALE 417
Query: 523 TPSESH 506
P H
Sbjct: 418 CPLNEH 423
>AE014134-887|AAZ66448.1| 9606|Drosophila melanogaster CG33715-PE,
isoform E protein.
Length = 9606
Score = 30.7 bits (66), Expect = 2.8
Identities = 16/72 (22%), Positives = 35/72 (48%)
Frame = +1
Query: 481 KVNLPVNPYGTQKALIHQVIKTIKAAQNCLLESPTGSGKTLALLCGTLAWLQAEIERINK 660
++ +P+ +KA I ++I+TI+ Q+ E P KT+ + T ++ E +
Sbjct: 4204 EIEIPLPHENGEKANIDKIIETIQEIQSTSEEKPNNESKTITTVTTTTLSTESISESVTP 4263
Query: 661 LQMESYFEEIFE 696
++ + E + E
Sbjct: 4264 MEPKKVAEPVPE 4275
>AY060980-1|AAL28528.1| 237|Drosophila melanogaster GM13219p
protein.
Length = 237
Score = 30.3 bits (65), Expect = 3.7
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +1
Query: 190 GKRKVFNAYTIYSYTLGTLFIFVLNCKICHHQLWFYH 300
G + F Y Y+ TLG LF+ + +I H LW H
Sbjct: 177 GNHRYFFLYMTYT-TLGCLFLILFGLEIGHKYLWLDH 212
>AE014297-4073|AAF56670.2| 381|Drosophila melanogaster CG5880-PA
protein.
Length = 381
Score = 30.3 bits (65), Expect = 3.7
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +1
Query: 190 GKRKVFNAYTIYSYTLGTLFIFVLNCKICHHQLWFYH 300
G + F Y Y+ TLG LF+ + +I H LW H
Sbjct: 177 GNHRYFFLYMTYT-TLGCLFLILFGLEIGHKYLWLDH 212
>Y12322-1|CAA72991.1| 1191|Drosophila melanogaster u-shaped protein.
Length = 1191
Score = 29.5 bits (63), Expect = 6.5
Identities = 11/41 (26%), Positives = 22/41 (53%)
Frame = +1
Query: 664 QMESYFEEIFENKMDDSAGNANNRKHVDNXFTSEVSFAKPE 786
Q + E+ E++++DS NN ++D+ + F +PE
Sbjct: 35 QKQQQMEDQLEDQLNDSRDPQNNNNNIDDDADEDAEFEEPE 75
>BT015278-1|AAT94507.1| 1191|Drosophila melanogaster LD12631p
protein.
Length = 1191
Score = 29.5 bits (63), Expect = 6.5
Identities = 11/41 (26%), Positives = 22/41 (53%)
Frame = +1
Query: 664 QMESYFEEIFENKMDDSAGNANNRKHVDNXFTSEVSFAKPE 786
Q + E+ E++++DS NN ++D+ + F +PE
Sbjct: 35 QKQQQMEDQLEDQLNDSRDPQNNNNNIDDDADEDAEFEEPE 75
>AE014134-116|AAF51488.2| 1191|Drosophila melanogaster CG2762-PA
protein.
Length = 1191
Score = 29.5 bits (63), Expect = 6.5
Identities = 11/41 (26%), Positives = 22/41 (53%)
Frame = +1
Query: 664 QMESYFEEIFENKMDDSAGNANNRKHVDNXFTSEVSFAKPE 786
Q + E+ E++++DS NN ++D+ + F +PE
Sbjct: 35 QKQQQMEDQLEDQLNDSRDPQNNNNNIDDDADEDAEFEEPE 75
>AY071291-1|AAL48913.1| 535|Drosophila melanogaster RE31829p
protein.
Length = 535
Score = 29.1 bits (62), Expect = 8.5
Identities = 17/39 (43%), Positives = 20/39 (51%)
Frame = +1
Query: 556 AQNCLLESPTGSGKTLALLCGTLAWLQAEIERINKLQME 672
AQ CLL PTG+GKT L T + E IN + E
Sbjct: 127 AQMCLLTGPTGAGKTTTLRVLTKEFGYQLQEWINPIDCE 165
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,835,233
Number of Sequences: 53049
Number of extensions: 588663
Number of successful extensions: 2001
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1923
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2001
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4311772920
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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