Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP04_F_E18
(886 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 37 0.017
AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical ... 32 0.47
AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical ... 32 0.47
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 30 1.9
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 30 1.9
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 30 1.9
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 30 1.9
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 30 1.9
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 30 1.9
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 37.1 bits (82), Expect = 0.017
Identities = 18/39 (46%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
Frame = -1
Query: 493 FXPPXXXGGGPPXPXFFFXXGXPXPPP-XGGAGPXXPFF 380
F PP GG P P F G P PPP GG P P F
Sbjct: 73 FIPPPPGPGGIPPPPPMFAGGIPPPPPMMGGIPPPPPMF 111
Score = 33.1 bits (72), Expect = 0.27
Identities = 16/34 (47%), Positives = 16/34 (47%)
Frame = -1
Query: 487 PPXXXGGGPPXPXFFFXXGXPXPPPXGGAGPXXP 386
PP GG PP P G P PPP GA P P
Sbjct: 87 PPMFAGGIPPPPPMM--GGIPPPPPMFGAPPPPP 118
Score = 31.5 bits (68), Expect = 0.83
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = -1
Query: 487 PPXXXGGGPPXPXFFFXXGXPXPPPXGGAGPXXP 386
PP GG PP P F P PP G P P
Sbjct: 97 PPPMMGGIPPPPPMFGAPPPPPPPSGLGVAPQPP 130
>AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical
protein R148.5b protein.
Length = 505
Score = 32.3 bits (70), Expect = 0.47
Identities = 17/41 (41%), Positives = 17/41 (41%), Gaps = 4/41 (9%)
Frame = -1
Query: 493 FXPPXXXGGGPPXPXFFFXXGXP----XPPPXGGAGPXXPF 383
F PP G PP P F G P PPP G GP F
Sbjct: 295 FFPPPPRGHFPPPPPHFMGRGMPPPFMPPPPHFGMGPPRGF 335
>AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical
protein R148.5a protein.
Length = 528
Score = 32.3 bits (70), Expect = 0.47
Identities = 17/41 (41%), Positives = 17/41 (41%), Gaps = 4/41 (9%)
Frame = -1
Query: 493 FXPPXXXGGGPPXPXFFFXXGXP----XPPPXGGAGPXXPF 383
F PP G PP P F G P PPP G GP F
Sbjct: 295 FFPPPPRGHFPPPPPHFMGRGMPPPFMPPPPHFGMGPPRGF 335
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 30.3 bits (65), Expect = 1.9
Identities = 16/38 (42%), Positives = 16/38 (42%), Gaps = 4/38 (10%)
Frame = -1
Query: 487 PPXXXGG----GPPXPXFFFXXGXPXPPPXGGAGPXXP 386
PP GG PP P F G P PPP G P P
Sbjct: 761 PPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAP 798
Score = 29.5 bits (63), Expect = 3.3
Identities = 14/31 (45%), Positives = 14/31 (45%), Gaps = 1/31 (3%)
Frame = -1
Query: 484 PXXXGGGPPXPXFF-FXXGXPXPPPXGGAGP 395
P GG PP P G P PPP GG P
Sbjct: 707 PPITGGPPPPPGLPPITGGPPPPPPPGGLPP 737
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 30.3 bits (65), Expect = 1.9
Identities = 16/38 (42%), Positives = 16/38 (42%), Gaps = 4/38 (10%)
Frame = -1
Query: 487 PPXXXGG----GPPXPXFFFXXGXPXPPPXGGAGPXXP 386
PP GG PP P F G P PPP G P P
Sbjct: 761 PPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAP 798
Score = 29.5 bits (63), Expect = 3.3
Identities = 14/31 (45%), Positives = 14/31 (45%), Gaps = 1/31 (3%)
Frame = -1
Query: 484 PXXXGGGPPXPXFF-FXXGXPXPPPXGGAGP 395
P GG PP P G P PPP GG P
Sbjct: 707 PPITGGPPPPPGLPPITGGPPPPPPPGGLPP 737
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 30.3 bits (65), Expect = 1.9
Identities = 16/38 (42%), Positives = 16/38 (42%), Gaps = 4/38 (10%)
Frame = -1
Query: 487 PPXXXGG----GPPXPXFFFXXGXPXPPPXGGAGPXXP 386
PP GG PP P F G P PPP G P P
Sbjct: 344 PPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAP 381
Score = 29.5 bits (63), Expect = 3.3
Identities = 14/31 (45%), Positives = 14/31 (45%), Gaps = 1/31 (3%)
Frame = -1
Query: 484 PXXXGGGPPXPXFF-FXXGXPXPPPXGGAGP 395
P GG PP P G P PPP GG P
Sbjct: 290 PPITGGPPPPPGLPPITGGPPPPPPPGGLPP 320
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 30.3 bits (65), Expect = 1.9
Identities = 14/31 (45%), Positives = 15/31 (48%)
Frame = -1
Query: 487 PPXXXGGGPPXPXFFFXXGXPXPPPXGGAGP 395
PP G PP P G P PPP GG+ P
Sbjct: 264 PPPPRTGSPPPPP----TGSPPPPPAGGSPP 290
Score = 28.3 bits (60), Expect = 7.7
Identities = 13/31 (41%), Positives = 14/31 (45%)
Frame = -1
Query: 487 PPXXXGGGPPXPXFFFXXGXPXPPPXGGAGP 395
PP GG PP P P PPP G+ P
Sbjct: 281 PPPPAGGSPPPPR---AGSPPPPPPPRGSPP 308
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 30.3 bits (65), Expect = 1.9
Identities = 14/31 (45%), Positives = 15/31 (48%)
Frame = -1
Query: 487 PPXXXGGGPPXPXFFFXXGXPXPPPXGGAGP 395
PP G PP P G P PPP GG+ P
Sbjct: 285 PPPPRTGSPPPPP----TGSPPPPPAGGSPP 311
Score = 28.3 bits (60), Expect = 7.7
Identities = 13/31 (41%), Positives = 14/31 (45%)
Frame = -1
Query: 487 PPXXXGGGPPXPXFFFXXGXPXPPPXGGAGP 395
PP GG PP P P PPP G+ P
Sbjct: 302 PPPPAGGSPPPPR---AGSPPPPPPPRGSPP 329
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 30.3 bits (65), Expect = 1.9
Identities = 14/31 (45%), Positives = 15/31 (48%)
Frame = -1
Query: 487 PPXXXGGGPPXPXFFFXXGXPXPPPXGGAGP 395
PP G PP P G P PPP GG+ P
Sbjct: 270 PPPPRTGSPPPPP----TGSPPPPPAGGSPP 296
Score = 28.3 bits (60), Expect = 7.7
Identities = 13/31 (41%), Positives = 14/31 (45%)
Frame = -1
Query: 487 PPXXXGGGPPXPXFFFXXGXPXPPPXGGAGP 395
PP GG PP P P PPP G+ P
Sbjct: 287 PPPPAGGSPPPPR---AGSPPPPPPPRGSPP 314
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,853,286
Number of Sequences: 27780
Number of extensions: 162522
Number of successful extensions: 390
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 237
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 332
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2234373834
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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