Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP04_F_E10
         (885 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_01_0576 - 5114636-5115151,5115254-5116183,5116898-5117614,511...    31   0.93 
09_06_0317 - 22265786-22267618,22267874-22268446,22268546-222686...    31   1.6  
05_03_0146 + 8883761-8883860,8886000-8886086,8886574-8886684,888...    30   2.8  

>08_01_0576 -
           5114636-5115151,5115254-5116183,5116898-5117614,
           5119630-5119746,5119930-5120295,5121365-5121634
          Length = 971

 Score = 31.5 bits (68), Expect = 0.93
 Identities = 33/134 (24%), Positives = 64/134 (47%), Gaps = 2/134 (1%)
 Frame = +1

Query: 181 AEVKAFNAELSGLYDN-KPPISKAKMSAITKGAIKAIKFYKHVVHSVEKFIQKCKPEYKV 357
           A V+ +   LS L  N KP I++  + A    A+ A    + +  ++   I +   + K+
Sbjct: 42  AVVRVYVEVLSELTFNCKPIITELTIIAGQHAALAA----RGIADAICARIAEVSADQKL 97

Query: 358 PGLYVIDSIVRQSRHQFGQDKDVFAPRFAKNMQQTFANLFRCPAEDKRNIIR-VLNLWQK 534
           P LY++DSIV+      G++   +   FA  +Q+ F + +R    ++   +R +   W  
Sbjct: 98  PSLYLLDSIVK----NIGRE---YVGHFAARLQKVFCDAYRKVHRNQHAAMRHLFGTW-- 148

Query: 535 NNVFSPQVIQPLLD 576
           + VF   V++ + D
Sbjct: 149 SQVFPSSVLRGIED 162


>09_06_0317 -
           22265786-22267618,22267874-22268446,22268546-22268677,
           22268931-22269137,22269287-22269388,22270742-22271032
          Length = 1045

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 21/74 (28%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
 Frame = +1

Query: 346 EYKVPGLYVIDSIVRQSRHQFGQDKDVFAPRFAKNMQQTFANLFRCPAEDKRNIIR-VLN 522
           E K+P LY++DSIV+      G+D   +   F+  + + F   ++       N +R +  
Sbjct: 101 EQKLPSLYLLDSIVK----NIGKD---YVKHFSARLPEVFCKAYKQVDSSIHNSMRHLFG 153

Query: 523 LWQKNNVFSPQVIQ 564
            W+   VFSP  +Q
Sbjct: 154 TWK--GVFSPTSLQ 165


>05_03_0146 +
           8883761-8883860,8886000-8886086,8886574-8886684,
           8887021-8887121,8887208-8887258,8887347-8887496,
           8887577-8887639,8887728-8887814,8887908-8888018,
           8888097-8888387,8889372-8889815
          Length = 531

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = +1

Query: 532 KNNVFSPQVIQPLLDMADPNHPLHQEIQQNNAN 630
           KNN F  QV    + M    HP  ++IQQN+ N
Sbjct: 214 KNNHFKRQVNGTTMAMQSNEHPNEEDIQQNSRN 246


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,704,603
Number of Sequences: 37544
Number of extensions: 379050
Number of successful extensions: 850
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 820
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 849
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2503236492
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)