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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP04_F_E06
         (887 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL110482-2|CAB60335.1|  316|Caenorhabditis elegans Hypothetical ...   132   3e-31
AL110482-1|CAB54385.1|  316|Caenorhabditis elegans Hypothetical ...   132   3e-31
U80844-1|AAB37976.1|  317|Caenorhabditis elegans Hypothetical pr...   116   3e-26
U55368-5|AAA97992.2|  333|Caenorhabditis elegans Hypothetical pr...   107   1e-23
Z75553-1|CAA99947.2|  320|Caenorhabditis elegans Hypothetical pr...   102   4e-22
AL110482-3|CAB60336.1|  339|Caenorhabditis elegans Hypothetical ...   101   9e-22
U21324-6|AAA62562.1|  287|Caenorhabditis elegans Hypothetical pr...    76   3e-14
Z71181-2|CAA94895.1|  301|Caenorhabditis elegans Hypothetical pr...    74   1e-13
U50068-4|AAB37733.1|  287|Caenorhabditis elegans Hypothetical pr...    74   1e-13
Z81088-3|CAB03128.1|  283|Caenorhabditis elegans Hypothetical pr...    69   6e-12
Z81088-2|CAB03127.1|  297|Caenorhabditis elegans Hypothetical pr...    65   7e-11
U21308-3|AAB93322.2|  321|Caenorhabditis elegans Hypothetical pr...    62   4e-10
U80844-2|AAB37972.1|  134|Caenorhabditis elegans Hypothetical pr...    62   5e-10
U39654-1|AAA80407.2|  131|Caenorhabditis elegans Hypothetical pr...    50   2e-06
U00033-13|AAC48300.1|  439|Caenorhabditis elegans Mechanosensory...    31   1.1  
Z72517-3|CAA96695.1|  717|Caenorhabditis elegans Hypothetical pr...    29   4.4  
Z77669-5|CAK12563.1|  976|Caenorhabditis elegans Hypothetical pr...    28   7.8  
Z77669-4|CAB01242.1|  988|Caenorhabditis elegans Hypothetical pr...    28   7.8  

>AL110482-2|CAB60335.1|  316|Caenorhabditis elegans Hypothetical
           protein Y39G8B.1b protein.
          Length = 316

 Score =  132 bits (319), Expect = 3e-31
 Identities = 67/167 (40%), Positives = 96/167 (57%), Gaps = 1/167 (0%)
 Frame = +2

Query: 356 VATLKLRDGTFMPVIALGTALLPPRLTTEIVETAIDMGYRAIDTAYIYGNEKLIGKAIKN 535
           V +LKL  G  +P I LGT    P      ++TA+  GYR ID A++Y N+K +G+A+K 
Sbjct: 2   VQSLKLNSGYSIPAIGLGTWQSKPGEVAAAIKTAVAAGYRHIDCAHVYQNQKEVGEALKE 61

Query: 536 KIDDGTVRRDELFIMGKLWSTFHRTDLVETACRISLADLGLEFFDLFLIHNPMSLKEGNS 715
            +D+G V+R+ELFI  K+W+TFH          I L+DL L + DL LIH P    EG  
Sbjct: 62  ILDEGKVKREELFITSKVWNTFHSEAKAHENIDIILSDLQLSYVDLMLIHWPQGYAEGAE 121

Query: 716 SIPK-ISSVIQYSEFDYMDAWFGMEDLVAKGLAKSIGVSNFNSTQIR 853
             P   +  ++YS+ DY++ W   E     G  +SIG+SNF  +QI+
Sbjct: 122 LFPAGENGKMRYSDVDYLETWKAFEAAQKAGKCRSIGLSNFTHSQIQ 168


>AL110482-1|CAB54385.1|  316|Caenorhabditis elegans Hypothetical
           protein Y39G8B.1a protein.
          Length = 316

 Score =  132 bits (319), Expect = 3e-31
 Identities = 67/167 (40%), Positives = 96/167 (57%), Gaps = 1/167 (0%)
 Frame = +2

Query: 356 VATLKLRDGTFMPVIALGTALLPPRLTTEIVETAIDMGYRAIDTAYIYGNEKLIGKAIKN 535
           V +LKL  G  +P I LGT    P      ++TA+  GYR ID A++Y N+K +G+A+K 
Sbjct: 2   VQSLKLNSGYSIPAIGLGTWQSKPGEVAAAIKTAVAAGYRHIDCAHVYQNQKEVGEALKE 61

Query: 536 KIDDGTVRRDELFIMGKLWSTFHRTDLVETACRISLADLGLEFFDLFLIHNPMSLKEGNS 715
            +D+G V+R+ELFI  K+W+TFH          I L+DL L + DL LIH P    EG  
Sbjct: 62  ILDEGKVKREELFITSKVWNTFHSEAKAHENIDIILSDLQLSYVDLMLIHWPQGYAEGAE 121

Query: 716 SIPK-ISSVIQYSEFDYMDAWFGMEDLVAKGLAKSIGVSNFNSTQIR 853
             P   +  ++YS+ DY++ W   E     G  +SIG+SNF  +QI+
Sbjct: 122 LFPAGENGKMRYSDVDYLETWKAFEAAQKAGKCRSIGLSNFTHSQIQ 168


>U80844-1|AAB37976.1|  317|Caenorhabditis elegans Hypothetical
           protein C07D8.6 protein.
          Length = 317

 Score =  116 bits (278), Expect = 3e-26
 Identities = 67/164 (40%), Positives = 94/164 (57%)
 Frame = +2

Query: 359 ATLKLRDGTFMPVIALGTALLPPRLTTEIVETAIDMGYRAIDTAYIYGNEKLIGKAIKNK 538
           A++KL +G  MPVI LGT    P      V+TA+  GYR IDTA +Y NE+ IG AIK  
Sbjct: 6   ASIKLSNGVEMPVIGLGTWQSSPAEVITAVKTAVKAGYRLIDTASVYQNEEAIGTAIKEL 65

Query: 539 IDDGTVRRDELFIMGKLWSTFHRTDLVETACRISLADLGLEFFDLFLIHNPMSLKEGNSS 718
           +++G V+R+ELFI  K W+       +E   R SL  L LE+ DL+L H P +  +  S 
Sbjct: 66  LEEGVVKREELFITTKAWTHELAPGKLEGGLRESLKKLQLEYVDLYLAHMPAAFNDDMSE 125

Query: 719 IPKISSVIQYSEFDYMDAWFGMEDLVAKGLAKSIGVSNFNSTQI 850
              I+S ++       D W   + +   GLAK++GVSN+N+ QI
Sbjct: 126 --HIASPVE-------DVWRQFDAVYKAGLAKAVGVSNWNNDQI 160


>U55368-5|AAA97992.2|  333|Caenorhabditis elegans Hypothetical
           protein T08H10.1 protein.
          Length = 333

 Score =  107 bits (256), Expect = 1e-23
 Identities = 57/169 (33%), Positives = 90/169 (53%), Gaps = 3/169 (1%)
 Frame = +2

Query: 356 VATLKLRDGTFMPVIALGTALLPPRLT-TEIVETAIDMGYRAIDTAYIYGNEKLIGKAIK 532
           V ++ L  G  +P+  LGT  +      T  +  A+D GYR IDTA++Y NE +IGK + 
Sbjct: 3   VDSIPLNTGAQLPLFGLGTWQVKDEAELTVALRAALDAGYRLIDTAHLYQNEHIIGKVLH 62

Query: 533 NKIDDGTVRRDELFIMGKLWSTFHRTDLVETACRISLADLGLEFFDLFLIHNPMSLKEGN 712
             I  G ++R+++F+  KL  T H  + V       L  L LE+ DL+LIH P   K   
Sbjct: 63  EYISSGKLKREDIFVTSKLPFTAHAPEDVPKCVESQLKALQLEYIDLYLIHCPFPFKHQE 122

Query: 713 SSIPKI--SSVIQYSEFDYMDAWFGMEDLVAKGLAKSIGVSNFNSTQIR 853
            S   +  +  +  +E  ++D W  +E L  +G  K++GVSNF+  Q++
Sbjct: 123 GSFAPLMENGELAVTEIAHIDTWRALEKLYKEGKLKALGVSNFSCNQLQ 171


>Z75553-1|CAA99947.2|  320|Caenorhabditis elegans Hypothetical
           protein ZC443.1 protein.
          Length = 320

 Score =  102 bits (244), Expect = 4e-22
 Identities = 62/166 (37%), Positives = 86/166 (51%)
 Frame = +2

Query: 353 EVATLKLRDGTFMPVIALGTALLPPRLTTEIVETAIDMGYRAIDTAYIYGNEKLIGKAIK 532
           +V    L +G  MP I LGT  +       ++  A+  GYR IDTA +Y NE  IG A+ 
Sbjct: 4   KVPIFTLSNGVLMPSIGLGTWQMTGEEGKTVIRNAVLAGYRHIDTATLYQNEHQIGDALA 63

Query: 533 NKIDDGTVRRDELFIMGKLWSTFHRTDLVETACRISLADLGLEFFDLFLIHNPMSLKEGN 712
               +G ++R+++FI  K +      D+VE A R SL  L L++ DL+L H P S K+  
Sbjct: 64  ELFAEGILKREDIFITTKAFCHEVAPDVVEEALRNSLKRLRLDYVDLYLAHIPASTKDDG 123

Query: 713 SSIPKISSVIQYSEFDYMDAWFGMEDLVAKGLAKSIGVSNFNSTQI 850
           S           S+    D W G E +   GL K+IGVSNFN +QI
Sbjct: 124 SF---------RSDVKVEDIWRGFEKVYGLGLTKAIGVSNFNESQI 160


>AL110482-3|CAB60336.1|  339|Caenorhabditis elegans Hypothetical
           protein Y39G8B.2 protein.
          Length = 339

 Score =  101 bits (241), Expect = 9e-22
 Identities = 58/169 (34%), Positives = 88/169 (52%), Gaps = 6/169 (3%)
 Frame = +2

Query: 362 TLKLRDGTFMPVIALGTALLPPRLTTEIVETAIDMGYRAIDTAYIYGNEKLIGKAIKNKI 541
           T+ L  G  MPVI  GT  LP  L  E V  A++ GYR ID+A  + N++ +   IK+  
Sbjct: 6   TVTLNSGYEMPVIGYGTWQLPKNLAAERVRDALEAGYRHIDSALSFKNQEEVAAGIKDWC 65

Query: 542 DDGTVRRDELFIMGKLWSTFHRTDLVETACRISLADLGLEFFDLFLIHNPMSLKE----G 709
               VRR+ELF+  K+W+T+H  +         L      + DL +IH P    E    G
Sbjct: 66  KIRKVRREELFLSSKIWNTYHSRNRCMQQIDEMLEIFETTYMDLIVIHWPFGWAEDEPPG 125

Query: 710 NSSI-PK-ISSVIQYSEFDYMDAWFGMEDLVAKGLAKSIGVSNFNSTQI 850
              + P+  +  ++YS+ DY++ W  +ED    G  +SIG++NFN  Q+
Sbjct: 126 ERGLWPRGANGKMRYSDVDYLETWKALEDAHRSGKIRSIGLANFNIGQV 174


>U21324-6|AAA62562.1|  287|Caenorhabditis elegans Hypothetical
           protein C35D10.6 protein.
          Length = 287

 Score = 76.2 bits (179), Expect = 3e-14
 Identities = 46/151 (30%), Positives = 82/151 (54%), Gaps = 2/151 (1%)
 Frame = +2

Query: 389 MPVIALGT-ALLPPRLTTEIVETAIDMGYRAIDTAYIYGNEKLIGKAIKNKIDDGTVRRD 565
           MP+I +GT  +    +  ++++     GYR IDTA +Y NE  IG+ ++  +    ++R+
Sbjct: 11  MPLIGIGTWQVQKEEILRQVIDAGFKEGYRFIDTAQVYNNEAKIGRILEKLLPANGLKRE 70

Query: 566 ELFIMGKLWSTFHRTDLVETACRISLADLGLEFFDLFLIHNP-MSLKEGNSSIPKISSVI 742
           +++I  KL  +         +   SL++L +E+ DL LIH P  SLK  N +  K+    
Sbjct: 71  DIWITSKLAPSNAGVKKARESIEESLSNLKVEYLDLLLIHWPGSSLKSENPANKKLR--- 127

Query: 743 QYSEFDYMDAWFGMEDLVAKGLAKSIGVSNF 835
                  +++W  M +++A+G  +S+GVSNF
Sbjct: 128 -------VESWNVMCEMMAEGKLRSVGVSNF 151


>Z71181-2|CAA94895.1|  301|Caenorhabditis elegans Hypothetical
           protein K07C5.2 protein.
          Length = 301

 Score = 74.1 bits (174), Expect = 1e-13
 Identities = 50/159 (31%), Positives = 79/159 (49%), Gaps = 3/159 (1%)
 Frame = +2

Query: 368 KLRDGTFMPVIALGTALLPPRLTTEI-VETAIDMGYRAIDTAYIYGNEKLIGKAIKNKID 544
           K  DG  MP I LG + +  +   ++ +E A+  GYR  DTA +Y NE  +G ++K  + 
Sbjct: 13  KFSDGYEMPKIGLGISRIETQQDLDVSIEAALKSGYRQFDTANLYKNETFLGNSLKKYLP 72

Query: 545 DGTVRRDELFIMGKLWSTFHRTDLVETACRI--SLADLGLEFFDLFLIHNPMSLKEGNSS 718
              + R+++FI  K+  T +   + ET  ++  SLA L  ++ DL LIH P     GN  
Sbjct: 73  QFGLTREDVFITTKV-RTLNENTVEETEKQLANSLATLQTDYVDLLLIHYPRDRDTGNDD 131

Query: 719 IPKISSVIQYSEFDYMDAWFGMEDLVAKGLAKSIGVSNF 835
             +I+   +         W  +E     G  +SIGVSN+
Sbjct: 132 DYEINKSRR------KIVWQTLEKAKESGRVRSIGVSNY 164


>U50068-4|AAB37733.1|  287|Caenorhabditis elegans Hypothetical
           protein C01G5.5 protein.
          Length = 287

 Score = 74.1 bits (174), Expect = 1e-13
 Identities = 48/163 (29%), Positives = 82/163 (50%), Gaps = 2/163 (1%)
 Frame = +2

Query: 368 KLRDGTFMPVIALGTALLPPRLTTEIVETAIDMGYRAIDTAYIYGNEKLIGKAIKNKIDD 547
           KL++G  +P +ALGT           V+ A+ +GYR+ DTA  Y NEK +G A+K  +  
Sbjct: 3   KLKNGQEIPKLALGTYEAKGDQLFAAVDEALKVGYRSFDTAKYYENEKDLGLALKTLLPR 62

Query: 548 GTVRRDELFIMGKL--WSTFHRTDLVETACRISLADLGLEFFDLFLIHNPMSLKEGNSSI 721
             +  +++++  K+  +S+ +  +L+      SL  L  ++ DL L+H P  L       
Sbjct: 63  HNICSEDIYLTSKVFPYSSKNAAELIRKDVNESLELLDRKYLDLVLVHYPRPL------- 115

Query: 722 PKISSVIQYSEFDYMDAWFGMEDLVAKGLAKSIGVSNFNSTQI 850
                + + ++    D W  +E L A+G  +SIGVSN+    I
Sbjct: 116 -DTEDLNENNKMYRKDTWIALEKLHAEGKIRSIGVSNYEPHHI 157


>Z81088-3|CAB03128.1|  283|Caenorhabditis elegans Hypothetical
           protein F53F1.3 protein.
          Length = 283

 Score = 68.5 bits (160), Expect = 6e-12
 Identities = 45/158 (28%), Positives = 82/158 (51%)
 Frame = +2

Query: 362 TLKLRDGTFMPVIALGTALLPPRLTTEIVETAIDMGYRAIDTAYIYGNEKLIGKAIKNKI 541
           ++KL  G   P+I LGT  +       +++ A+  GYR  DTA +Y NEK IG A++  +
Sbjct: 2   SIKLNTGYDCPLIGLGTYKIIGDQVLPVLDAALTAGYRLFDTAKVYNNEKEIGDALEILL 61

Query: 542 DDGTVRRDELFIMGKLWSTFHRTDLVETACRISLADLGLEFFDLFLIHNPMSLKEGNSSI 721
               ++R+++FI  K+    +  + V+     SL+ L   + D++LIH P S   G+   
Sbjct: 62  PKHNLKREDIFITTKMHP--NTVENVKKLVDESLSLLKTSYIDMYLIHYPKSFDYGDQD- 118

Query: 722 PKISSVIQYSEFDYMDAWFGMEDLVAKGLAKSIGVSNF 835
             ++  ++ + ++  D W    +    G  +S+GVS+F
Sbjct: 119 -PMNKTLRIATWN--DLW----ECKNAGKIRSVGVSSF 149


>Z81088-2|CAB03127.1|  297|Caenorhabditis elegans Hypothetical
           protein F53F1.2 protein.
          Length = 297

 Score = 64.9 bits (151), Expect = 7e-11
 Identities = 47/160 (29%), Positives = 78/160 (48%), Gaps = 4/160 (2%)
 Frame = +2

Query: 368 KLRDGTFMPVIALGTALLPPRLTTEIVETAIDMGYRAIDTAYIYGNEKLIGKAIKNKIDD 547
           KL  G  +P +  GT  +        ++ A+  GYR  DTA  Y NEK +G+A+K  +  
Sbjct: 14  KLNSGYNIPFVGFGTYKVTGENVPPAIDAALTAGYRMFDTAKYYLNEKELGEALKILLPK 73

Query: 548 GTVRRDELFIMGKLWSTFHRTDLVETACR----ISLADLGLEFFDLFLIHNPMSLKEGNS 715
             + R ++F+  K    F  +     ACR     SL  L  ++ D++L+H P   K  +S
Sbjct: 74  HGLSRSDVFLTSKF---FPESKNCREACRGFVEESLQSLQTDYIDMYLVHYP---KPNDS 127

Query: 716 SIPKISSVIQYSEFDYMDAWFGMEDLVAKGLAKSIGVSNF 835
               +++  +Y +     A+  +E+  A G  +SIGVSN+
Sbjct: 128 DNDDVNNA-EYRKI----AYEVLEEAKAAGKVRSIGVSNY 162


>U21308-3|AAB93322.2|  321|Caenorhabditis elegans Hypothetical
           protein ZK1290.5 protein.
          Length = 321

 Score = 62.5 bits (145), Expect = 4e-10
 Identities = 50/161 (31%), Positives = 75/161 (46%)
 Frame = +2

Query: 356 VATLKLRDGTFMPVIALGTALLPPRLTTEIVETAIDMGYRAIDTAYIYGNEKLIGKAIKN 535
           + T  L +   MP+I LGT          ++ +    GYR IDTA  YG EK +G A+KN
Sbjct: 2   IPTTVLSNNVEMPLIGLGTTHSGGYYHDAVLHSIKKCGYRLIDTAKRYGVEKQLGIAVKN 61

Query: 536 KIDDGTVRRDELFIMGKLWSTFHRTDLVETACRISLADLGLEFFDLFLIHNPMSLKEGNS 715
                +V R+E+F+  KLW      D V  A + S   L  ++ D+++IH          
Sbjct: 62  ----CSVPREEMFLSTKLWPV-DCGDEVYNAFQTSCEKLQTDYLDMYMIH---------- 106

Query: 716 SIPKISSVIQYSEFDYMDAWFGMEDLVAKGLAKSIGVSNFN 838
            +P++   I   +      W  ME L      +SIGVSN++
Sbjct: 107 -MPQLPDWIVNQKETKEKTWRQMELLYEDEHVRSIGVSNYS 146


>U80844-2|AAB37972.1|  134|Caenorhabditis elegans Hypothetical
           protein C07D8.5 protein.
          Length = 134

 Score = 62.1 bits (144), Expect = 5e-10
 Identities = 41/122 (33%), Positives = 62/122 (50%), Gaps = 1/122 (0%)
 Frame = +2

Query: 257 GKQKRDTGDLTDEQYKTRIAE-LNEAKLKGSVKEVATLKLRDGTFMPVIALGTALLPPRL 433
           G+     G+ +D+ +   +   L ++ LK S  + + L L +   MP + LGT       
Sbjct: 12  GRSSNSDGNASDDGHPPALTPILLKSYLKNSDAK-SHLTLSNAHSMPAVGLGTWQSNAED 70

Query: 434 TTEIVETAIDMGYRAIDTAYIYGNEKLIGKAIKNKIDDGTVRRDELFIMGKLWSTFHRTD 613
               V+ A+  GY  IDTA  Y NE+ IG AIK  I +G V+R++LFI  K+ + F    
Sbjct: 71  VISAVKAAVKNGYSLIDTASGYNNEEFIGTAIKEVIAEGVVKREDLFITTKVPNLFSSLR 130

Query: 614 LV 619
           LV
Sbjct: 131 LV 132


>U39654-1|AAA80407.2|  131|Caenorhabditis elegans Hypothetical
           protein C56G3.2 protein.
          Length = 131

 Score = 50.0 bits (114), Expect = 2e-06
 Identities = 32/88 (36%), Positives = 46/88 (52%)
 Frame = +2

Query: 590 WSTFHRTDLVETACRISLADLGLEFFDLFLIHNPMSLKEGNSSIPKISSVIQYSEFDYMD 769
           W+       +E A R SL  L LE+ DL+L H P +  +  S   KI S ++       D
Sbjct: 53  WTNELAPGRLEGALRDSLKKLHLEYVDLYLAHMPTAFSDDMSQ--KIESSVE-------D 103

Query: 770 AWFGMEDLVAKGLAKSIGVSNFNSTQIR 853
            W   + +   GLAK++GVSN+N+ QIR
Sbjct: 104 IWRQFDAVYKAGLAKAVGVSNWNNDQIR 131


>U00033-13|AAC48300.1|  439|Caenorhabditis elegans Mechanosensory
           abnormality protein14 protein.
          Length = 439

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 16/33 (48%), Positives = 21/33 (63%), Gaps = 3/33 (9%)
 Frame = +2

Query: 440 EIVETAIDMGYRAIDTAYIYG---NEKLIGKAI 529
           +IVETAI  G   IDT Y Y    +E ++GKA+
Sbjct: 118 KIVETAIKQGINYIDTGYWYSQSRSESILGKAL 150


>Z72517-3|CAA96695.1|  717|Caenorhabditis elegans Hypothetical
           protein T28F4.4 protein.
          Length = 717

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 16/58 (27%), Positives = 28/58 (48%)
 Frame = -2

Query: 610 GAMECTPQFTHNEKLVSPHGAVVNLVLDRFSYELFVAVNISGIYSSVAHINSSLHYFR 437
           G      QFT  + +    GA+  +VL +    L     +S +++++AH+ SS   FR
Sbjct: 422 GDAHINSQFTKEDFVHRTKGAIAKIVLVKERIRLAKVPALSELFNALAHVMSSPENFR 479


>Z77669-5|CAK12563.1|  976|Caenorhabditis elegans Hypothetical
           protein T07F10.1b protein.
          Length = 976

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 15/48 (31%), Positives = 20/48 (41%)
 Frame = +2

Query: 533 NKIDDGTVRRDELFIMGKLWSTFHRTDLVETACRISLADLGLEFFDLF 676
           ++I DG +R  E F M  LWS      +  T       D  +E  D F
Sbjct: 419 DEISDGNMRMREWFTMDALWSALAADSVASTHPLTFKIDKAMEVLDSF 466


>Z77669-4|CAB01242.1|  988|Caenorhabditis elegans Hypothetical
           protein T07F10.1a protein.
          Length = 988

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 15/48 (31%), Positives = 20/48 (41%)
 Frame = +2

Query: 533 NKIDDGTVRRDELFIMGKLWSTFHRTDLVETACRISLADLGLEFFDLF 676
           ++I DG +R  E F M  LWS      +  T       D  +E  D F
Sbjct: 431 DEISDGNMRMREWFTMDALWSALAADSVASTHPLTFKIDKAMEVLDSF 478


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,642,323
Number of Sequences: 27780
Number of extensions: 419093
Number of successful extensions: 1444
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1349
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1430
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2244863852
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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