Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP04_F_E01
         (926 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M73079-1|AAA28382.1|  543|Drosophila melanogaster BarH1 protein.       30   3.9  
AE014298-1935|AAF48297.1| 1419|Drosophila melanogaster CG11172-P...    29   9.0  
AE014297-3695|AAF56384.1|  208|Drosophila melanogaster CG11786-P...    29   9.0  

>M73079-1|AAA28382.1|  543|Drosophila melanogaster BarH1 protein.
          Length = 543

 Score = 30.3 bits (65), Expect = 3.9
 Identities = 14/38 (36%), Positives = 19/38 (50%)
 Frame = +3

Query: 570 QHHRHSVHLXTQAAAPAFGSSANTGFSFGKPGSTTGGL 683
           QHH+H +H   Q AA A    + T  S G   +T  G+
Sbjct: 32  QHHQHHLHYGLQPAAVAHSIHSTTTMSSGGSTTTESGI 69


>AE014298-1935|AAF48297.1| 1419|Drosophila melanogaster CG11172-PA
           protein.
          Length = 1419

 Score = 29.1 bits (62), Expect = 9.0
 Identities = 15/49 (30%), Positives = 25/49 (51%)
 Frame = +3

Query: 450 QHPLEVSLHLLIRQLAVLLLGKQQIRMXDRPRICRLVQPPQHHRHSVHL 596
           QH ++   H L +   +LL  +QQ++   +    +  Q  QHHRH  H+
Sbjct: 306 QHSVQQQQHQLFQYNGLLLQPQQQLQQ-QQSHHQQQQQQQQHHRHGKHI 353


>AE014297-3695|AAF56384.1|  208|Drosophila melanogaster CG11786-PA
           protein.
          Length = 208

 Score = 29.1 bits (62), Expect = 9.0
 Identities = 10/17 (58%), Positives = 13/17 (76%)
 Frame = -3

Query: 291 LDPPNNGFEASPLPNEN 241
           L PPNNG++ +P PN N
Sbjct: 64  LPPPNNGYQYNPPPNNN 80


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,137,485
Number of Sequences: 53049
Number of extensions: 601022
Number of successful extensions: 1800
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1518
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1793
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4566862269
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)