Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP04_F_D16
         (869 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY873992-1|AAW71999.1|  259|Anopheles gambiae nanos protein.           66   1e-12
AY583530-1|AAS93544.1|  260|Anopheles gambiae NOS protein protein.     66   1e-12
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    23   9.2  
AF080564-1|AAC31944.1|  372|Anopheles gambiae Sex combs reduced ...    23   9.2  

>AY873992-1|AAW71999.1|  259|Anopheles gambiae nanos protein.
          Length = 259

 Score = 66.1 bits (154), Expect = 1e-12
 Identities = 28/53 (52%), Positives = 31/53 (58%)
 Frame = +1

Query: 514 CAFCKKNGESVSWYRTHALKDGRGRVKCPVLRGFRCPRCGATGDRAHTIKYCP 672
           C FC  N      Y +H  KD  G V CPVL+ F C RC ATG +AHT KYCP
Sbjct: 156 CVFCFNNKADREVYESHRCKDEAGNVTCPVLQTFVCMRCKATGTKAHTAKYCP 208


>AY583530-1|AAS93544.1|  260|Anopheles gambiae NOS protein protein.
          Length = 260

 Score = 66.1 bits (154), Expect = 1e-12
 Identities = 28/53 (52%), Positives = 31/53 (58%)
 Frame = +1

Query: 514 CAFCKKNGESVSWYRTHALKDGRGRVKCPVLRGFRCPRCGATGDRAHTIKYCP 672
           C FC  N      Y +H  KD  G V CPVL+ F C RC ATG +AHT KYCP
Sbjct: 157 CVFCFNNKADREVYESHRCKDEAGNVTCPVLQTFVCMRCKATGTKAHTAKYCP 209


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 23.4 bits (48), Expect = 9.2
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = +1

Query: 523 CKKNGESVSWYRTHALKDGRGRVKCPVLR 609
           CK  G+ V+  R H      GR +CP+ R
Sbjct: 502 CKLCGKVVTHIRNHYHVHFPGRFECPLCR 530


>AF080564-1|AAC31944.1|  372|Anopheles gambiae Sex combs reduced
           homeotic protein protein.
          Length = 372

 Score = 23.4 bits (48), Expect = 9.2
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = -2

Query: 736 LQQSSR*LKTGVPTTLINRSSVGN 665
           ++  SR LK+G P+T ++ SS  N
Sbjct: 184 VESVSRSLKSGNPSTAVSSSSTNN 207


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 829,744
Number of Sequences: 2352
Number of extensions: 17854
Number of successful extensions: 47
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 47
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 93026475
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)