Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP04_F_D07
         (891 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    26   0.46 
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    24   1.8  
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    23   4.3  
DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13 pro...    22   5.6  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    21   9.8  
AJ888865-1|CAI61930.1|  108|Tribolium castaneum modulator of act...    21   9.8  
AJ622939-1|CAF22091.1|  108|Tribolium castaneum ETS activity mod...    21   9.8  

>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 25.8 bits (54), Expect = 0.46
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = -2

Query: 281 FLNSGSLRLCWSKYTQ 234
           +  SGSL  CWS++TQ
Sbjct: 224 YKTSGSLYTCWSEFTQ 239


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 10/37 (27%), Positives = 20/37 (54%)
 Frame = -2

Query: 659 FHLFKYTIFYSTSSSCITLLLAFIEDRRRSETSGSFL 549
           F +  YT+ YS   +  T L+ FI+  + S +  +++
Sbjct: 359 FFVVDYTLLYSIVGAVTTYLVIFIQFDQSSNSRNNYV 395


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 6/12 (50%), Positives = 11/12 (91%)
 Frame = +2

Query: 485 RLNNCLVYFSKL 520
           RL NC++YF+++
Sbjct: 143 RLKNCVIYFNRI 154


>DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13
           protein.
          Length = 377

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -1

Query: 687 INYYGHHVLLSSLQIH 640
           I +YGHH +LS    H
Sbjct: 255 IAFYGHHFILSDPSKH 270


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = +3

Query: 579 PILDEGEEQRNAGRRC 626
           P+LD+G   RN    C
Sbjct: 21  PLLDDGTRTRNKAAEC 36


>AJ888865-1|CAI61930.1|  108|Tribolium castaneum modulator of
           activity of ets genes protein.
          Length = 108

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -1

Query: 510 KYTKQLFSLSTNSHSLPEMFDSSF 439
           ++  Q  +L T  H LPE+  S F
Sbjct: 42  EHVAQWINLVTQQHGLPEVPSSRF 65


>AJ622939-1|CAF22091.1|  108|Tribolium castaneum ETS activity
           modulator protein.
          Length = 108

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -1

Query: 510 KYTKQLFSLSTNSHSLPEMFDSSF 439
           ++  Q  +L T  H LPE+  S F
Sbjct: 42  EHVAQWINLVTQQHGLPEVPSSRF 65


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 171,619
Number of Sequences: 336
Number of extensions: 3440
Number of successful extensions: 13
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24720487
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)