Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP04_F_D05
(897 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 34 0.12
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 34 0.12
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 34 0.12
AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 32 0.48
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 31 0.85
Z82269-4|CAB70200.2| 633|Caenorhabditis elegans Hypothetical pr... 25 1.1
AL021487-14|CAA16360.3| 633|Caenorhabditis elegans Hypothetical... 25 1.1
Z82269-5|CAH60772.1| 618|Caenorhabditis elegans Hypothetical pr... 25 1.1
AL021487-15|CAH60766.1| 618|Caenorhabditis elegans Hypothetical... 25 1.1
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 31 1.1
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 31 1.1
AC006666-4|AAK21415.1| 109|Caenorhabditis elegans Hypothetical ... 25 1.3
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 28 1.5
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 28 1.5
Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical pr... 31 1.5
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 31 1.5
Z81543-3|CAB04425.1| 322|Caenorhabditis elegans Hypothetical pr... 25 1.9
Z81594-1|CAB04745.1| 908|Caenorhabditis elegans Hypothetical pr... 30 2.6
Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical pr... 30 2.6
U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (gr... 30 2.6
L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein. 30 2.6
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 30 2.6
AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein. 29 3.4
AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated... 29 3.4
AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated... 29 3.4
Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr... 29 4.5
U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical pr... 29 4.5
U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical pr... 29 4.5
AF067611-2|AAW88406.1| 2302|Caenorhabditis elegans Cadherin fami... 29 4.5
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 29 4.5
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 29 4.5
AL132860-5|CAB60515.1| 798|Caenorhabditis elegans Hypothetical ... 26 5.0
Z81592-1|CAB04725.1| 695|Caenorhabditis elegans Hypothetical pr... 29 6.0
Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical pr... 29 6.0
U53153-1|AAC69039.4| 715|Caenorhabditis elegans Hypothetical pr... 29 6.0
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 29 6.0
U39650-4|AAK39186.1| 944|Caenorhabditis elegans Apical junction... 29 6.0
U39650-3|AAK39188.1| 1148|Caenorhabditis elegans Apical junction... 29 6.0
U39650-2|AAM51517.1| 1439|Caenorhabditis elegans Apical junction... 29 6.0
U39650-1|AAK39187.1| 1480|Caenorhabditis elegans Apical junction... 29 6.0
AC024790-13|AAL32247.1| 311|Caenorhabditis elegans Hypothetical... 29 6.0
U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical p... 28 7.9
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 28 7.9
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 23 9.0
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 34.3 bits (75), Expect = 0.12
Identities = 14/21 (66%), Positives = 14/21 (66%)
Frame = -1
Query: 489 PPPXPGXFFXKKXXPPPPPPP 427
PPP PG F K PPPPPPP
Sbjct: 773 PPPPPGGF---KGGPPPPPPP 790
Score = 32.7 bits (71), Expect = 0.37
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = -1
Query: 489 PPPXPGXFFXKKXXPPPPPPP 427
PPP PG PPPPPPP
Sbjct: 744 PPPPPGGLPPISGGPPPPPPP 764
Score = 32.3 bits (70), Expect = 0.48
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = -1
Query: 489 PPPXPGXFFXKKXXPPPPPPP 427
PPP PG PPPPPPP
Sbjct: 728 PPPPPGGLPPITGGPPPPPPP 748
Score = 32.3 bits (70), Expect = 0.48
Identities = 14/29 (48%), Positives = 15/29 (51%)
Frame = -1
Query: 489 PPPXPGXFFXKKXXPPPPPPPXXXXRXGP 403
PPP PG PPPPPPP + GP
Sbjct: 761 PPPPPGG-----CPPPPPPPPPGGFKGGP 784
Score = 28.3 bits (60), Expect = 7.9
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = -1
Query: 489 PPPXPGXFFXKKXXPPPPPPP 427
PPP PG PPPPPPP
Sbjct: 713 PPPPPG-LPPITGGPPPPPPP 732
Score = 28.3 bits (60), Expect = 7.9
Identities = 17/42 (40%), Positives = 17/42 (40%)
Frame = -2
Query: 590 PPXXGXLRXPPPXGPPXXXSFXGGGGGXXXKKXPPPPXXGXF 465
PP G PPP PP F GG PPPP G F
Sbjct: 762 PPPPGGCPPPPP--PPPPGGFKGG--------PPPPPPPGMF 793
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 34.3 bits (75), Expect = 0.12
Identities = 14/21 (66%), Positives = 14/21 (66%)
Frame = -1
Query: 489 PPPXPGXFFXKKXXPPPPPPP 427
PPP PG F K PPPPPPP
Sbjct: 773 PPPPPGGF---KGGPPPPPPP 790
Score = 32.7 bits (71), Expect = 0.37
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = -1
Query: 489 PPPXPGXFFXKKXXPPPPPPP 427
PPP PG PPPPPPP
Sbjct: 744 PPPPPGGLPPISGGPPPPPPP 764
Score = 32.3 bits (70), Expect = 0.48
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = -1
Query: 489 PPPXPGXFFXKKXXPPPPPPP 427
PPP PG PPPPPPP
Sbjct: 728 PPPPPGGLPPITGGPPPPPPP 748
Score = 32.3 bits (70), Expect = 0.48
Identities = 14/29 (48%), Positives = 15/29 (51%)
Frame = -1
Query: 489 PPPXPGXFFXKKXXPPPPPPPXXXXRXGP 403
PPP PG PPPPPPP + GP
Sbjct: 761 PPPPPGG-----CPPPPPPPPPGGFKGGP 784
Score = 28.3 bits (60), Expect = 7.9
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = -1
Query: 489 PPPXPGXFFXKKXXPPPPPPP 427
PPP PG PPPPPPP
Sbjct: 713 PPPPPG-LPPITGGPPPPPPP 732
Score = 28.3 bits (60), Expect = 7.9
Identities = 17/42 (40%), Positives = 17/42 (40%)
Frame = -2
Query: 590 PPXXGXLRXPPPXGPPXXXSFXGGGGGXXXKKXPPPPXXGXF 465
PP G PPP PP F GG PPPP G F
Sbjct: 762 PPPPGGCPPPPP--PPPPGGFKGG--------PPPPPPPGMF 793
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 34.3 bits (75), Expect = 0.12
Identities = 14/21 (66%), Positives = 14/21 (66%)
Frame = -1
Query: 489 PPPXPGXFFXKKXXPPPPPPP 427
PPP PG F K PPPPPPP
Sbjct: 356 PPPPPGGF---KGGPPPPPPP 373
Score = 32.7 bits (71), Expect = 0.37
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = -1
Query: 489 PPPXPGXFFXKKXXPPPPPPP 427
PPP PG PPPPPPP
Sbjct: 327 PPPPPGGLPPISGGPPPPPPP 347
Score = 32.3 bits (70), Expect = 0.48
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = -1
Query: 489 PPPXPGXFFXKKXXPPPPPPP 427
PPP PG PPPPPPP
Sbjct: 311 PPPPPGGLPPITGGPPPPPPP 331
Score = 32.3 bits (70), Expect = 0.48
Identities = 14/29 (48%), Positives = 15/29 (51%)
Frame = -1
Query: 489 PPPXPGXFFXKKXXPPPPPPPXXXXRXGP 403
PPP PG PPPPPPP + GP
Sbjct: 344 PPPPPGG-----CPPPPPPPPPGGFKGGP 367
Score = 28.3 bits (60), Expect = 7.9
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = -1
Query: 489 PPPXPGXFFXKKXXPPPPPPP 427
PPP PG PPPPPPP
Sbjct: 296 PPPPPG-LPPITGGPPPPPPP 315
Score = 28.3 bits (60), Expect = 7.9
Identities = 17/42 (40%), Positives = 17/42 (40%)
Frame = -2
Query: 590 PPXXGXLRXPPPXGPPXXXSFXGGGGGXXXKKXPPPPXXGXF 465
PP G PPP PP F GG PPPP G F
Sbjct: 345 PPPPGGCPPPPP--PPPPGGFKGG--------PPPPPPPGMF 376
>AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily
assigned gene nameprotein 268 protein.
Length = 881
Score = 32.3 bits (70), Expect = 0.48
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -1
Query: 489 PPPXPGXFFXKKXXPPPPPPPXXXXRXGP 403
PPP P ++ PPPPPPP + P
Sbjct: 71 PPPPPLISILQQAPPPPPPPPPPTLKAPP 99
Score = 31.1 bits (67), Expect = 1.1
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = -1
Query: 489 PPPXPGXFFXKKXXPPPPPPP 427
PPP P + PPPPPPP
Sbjct: 70 PPPPPPLISILQQAPPPPPPP 90
Score = 28.3 bits (60), Expect = 7.9
Identities = 13/37 (35%), Positives = 13/37 (35%)
Frame = -1
Query: 489 PPPXPGXFFXKKXXPPPPPPPXXXXRXGPXXXXLXXP 379
PPP PPPPPPP P L P
Sbjct: 73 PPPLISILQQAPPPPPPPPPPTLKAPPPPPILGLKTP 109
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 31.5 bits (68), Expect = 0.85
Identities = 14/30 (46%), Positives = 14/30 (46%), Gaps = 1/30 (3%)
Frame = -1
Query: 489 PPPXPGXFFXKKXXP-PPPPPPXXXXRXGP 403
PPP PG P PPPPPP GP
Sbjct: 522 PPPMPGMAPLSTGAPTPPPPPPVGMANGGP 551
>Z82269-4|CAB70200.2| 633|Caenorhabditis elegans Hypothetical
protein Y45F10B.13a protein.
Length = 633
Score = 25.4 bits (53), Expect(2) = 1.1
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = -1
Query: 459 KKXXPPPPPPP 427
+K PPPPPPP
Sbjct: 261 EKSVPPPPPPP 271
Score = 24.2 bits (50), Expect(2) = 1.1
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = -1
Query: 447 PPPPPPPXXXXR 412
PPPPPPP R
Sbjct: 268 PPPPPPPKPVSR 279
>AL021487-14|CAA16360.3| 633|Caenorhabditis elegans Hypothetical
protein Y45F10B.13a protein.
Length = 633
Score = 25.4 bits (53), Expect(2) = 1.1
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = -1
Query: 459 KKXXPPPPPPP 427
+K PPPPPPP
Sbjct: 261 EKSVPPPPPPP 271
Score = 24.2 bits (50), Expect(2) = 1.1
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = -1
Query: 447 PPPPPPPXXXXR 412
PPPPPPP R
Sbjct: 268 PPPPPPPKPVSR 279
>Z82269-5|CAH60772.1| 618|Caenorhabditis elegans Hypothetical
protein Y45F10B.13b protein.
Length = 618
Score = 25.4 bits (53), Expect(2) = 1.1
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = -1
Query: 459 KKXXPPPPPPP 427
+K PPPPPPP
Sbjct: 246 EKSVPPPPPPP 256
Score = 24.2 bits (50), Expect(2) = 1.1
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = -1
Query: 447 PPPPPPPXXXXR 412
PPPPPPP R
Sbjct: 253 PPPPPPPKPVSR 264
>AL021487-15|CAH60766.1| 618|Caenorhabditis elegans Hypothetical
protein Y45F10B.13b protein.
Length = 618
Score = 25.4 bits (53), Expect(2) = 1.1
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = -1
Query: 459 KKXXPPPPPPP 427
+K PPPPPPP
Sbjct: 246 EKSVPPPPPPP 256
Score = 24.2 bits (50), Expect(2) = 1.1
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = -1
Query: 447 PPPPPPPXXXXR 412
PPPPPPP R
Sbjct: 253 PPPPPPPKPVSR 264
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 31.1 bits (67), Expect = 1.1
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = -1
Query: 489 PPPXPGXFFXKKXXPPPPPPPXXXXRXGP 403
PPP G PPPPPPP GP
Sbjct: 635 PPPPMGLPAVGAGAPPPPPPPPPSGAGGP 663
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 31.1 bits (67), Expect = 1.1
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = -1
Query: 489 PPPXPGXFFXKKXXPPPPPPPXXXXRXGP 403
PPP G PPPPPPP GP
Sbjct: 461 PPPPMGLPAVGAGAPPPPPPPPPSGAGGP 489
>AC006666-4|AAK21415.1| 109|Caenorhabditis elegans Hypothetical
protein H31G24.1 protein.
Length = 109
Score = 25.4 bits (53), Expect(2) = 1.3
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = -1
Query: 486 PPXPGXFFXKKXXPPPPPPP 427
PP P PPPPPPP
Sbjct: 71 PPQPYAQSPIAAVPPPPPPP 90
Score = 24.2 bits (50), Expect(2) = 1.3
Identities = 8/15 (53%), Positives = 8/15 (53%)
Frame = -1
Query: 447 PPPPPPPXXXXRXGP 403
PPPPPPP P
Sbjct: 86 PPPPPPPQPAPAQAP 100
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 28.3 bits (60), Expect(2) = 1.5
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = -1
Query: 489 PPPXPGXFFXKKXXPPPPP 433
PPP PG + PPPPP
Sbjct: 345 PPPPPGMRYPGGMPPPPPP 363
Score = 21.0 bits (42), Expect(2) = 1.5
Identities = 6/6 (100%), Positives = 6/6 (100%)
Frame = -1
Query: 444 PPPPPP 427
PPPPPP
Sbjct: 392 PPPPPP 397
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 28.3 bits (60), Expect(2) = 1.5
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = -1
Query: 489 PPPXPGXFFXKKXXPPPPP 433
PPP PG + PPPPP
Sbjct: 335 PPPPPGMRYPGGMPPPPPP 353
Score = 21.0 bits (42), Expect(2) = 1.5
Identities = 6/6 (100%), Positives = 6/6 (100%)
Frame = -1
Query: 444 PPPPPP 427
PPPPPP
Sbjct: 382 PPPPPP 387
>Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical
protein C31C9.6 protein.
Length = 965
Score = 30.7 bits (66), Expect = 1.5
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = -1
Query: 489 PPPXPGXFFXKKXXPPPPPPP 427
PPP P PPPPPPP
Sbjct: 492 PPPLPPIATPSSVPPPPPPPP 512
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 30.7 bits (66), Expect = 1.5
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = -1
Query: 489 PPPXPGXFFXKKXXPPPPPPP 427
PPP P PPPPPPP
Sbjct: 499 PPPLPPIATPSSVPPPPPPPP 519
>Z81543-3|CAB04425.1| 322|Caenorhabditis elegans Hypothetical
protein F49B2.3 protein.
Length = 322
Score = 24.6 bits (51), Expect(2) = 1.9
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = -1
Query: 465 FXKKXXPPPPPPP 427
F PPPPPPP
Sbjct: 259 FEPSQPPPPPPPP 271
Score = 24.2 bits (50), Expect(2) = 1.9
Identities = 8/15 (53%), Positives = 8/15 (53%)
Frame = -1
Query: 447 PPPPPPPXXXXRXGP 403
PPPPPPP P
Sbjct: 264 PPPPPPPPPEVSIAP 278
>Z81594-1|CAB04745.1| 908|Caenorhabditis elegans Hypothetical
protein T20F10.1 protein.
Length = 908
Score = 29.9 bits (64), Expect = 2.6
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = -1
Query: 489 PPPXPGXFFXKKXXPPPPPPP 427
PPP P K PPPPPP
Sbjct: 253 PPPNPTMLNHNKNMAPPPPPP 273
>Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical
protein C02C6.1a protein.
Length = 830
Score = 29.9 bits (64), Expect = 2.6
Identities = 17/48 (35%), Positives = 17/48 (35%)
Frame = -2
Query: 614 PGXXXXXXPPXXGXLRXPPPXGPPXXXSFXGGGGGXXXKKXPPPPXXG 471
PG PP G PPP G GGGGG P P G
Sbjct: 774 PGGRQAPMPPRGGP-GAPPPPGMRPPPGAPGGGGGMYPPLIPTRPGPG 820
>U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (grd
related) protein 6 protein.
Length = 240
Score = 29.9 bits (64), Expect = 2.6
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = -1
Query: 489 PPPXPGXFFXKKXXPPPPPPP 427
PPP P F PPPPPP
Sbjct: 57 PPPCPAQFCPPPPICPPPPPP 77
>L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein.
Length = 830
Score = 29.9 bits (64), Expect = 2.6
Identities = 17/48 (35%), Positives = 17/48 (35%)
Frame = -2
Query: 614 PGXXXXXXPPXXGXLRXPPPXGPPXXXSFXGGGGGXXXKKXPPPPXXG 471
PG PP G PPP G GGGGG P P G
Sbjct: 774 PGGRQAPMPPRGGP-GAPPPPGMRPPPGAPGGGGGMYPPLIPTRPGPG 820
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 29.9 bits (64), Expect = 2.6
Identities = 18/67 (26%), Positives = 22/67 (32%)
Frame = -2
Query: 665 FWAPPRAXXKXIFXXVFPGXXXXXXPPXXGXLRXPPPXGPPXXXSFXGGGGGXXXKKXPP 486
F PP++ F P G PPP GP S+ GG PP
Sbjct: 378 FAPPPQSGPPGAFAPPPSAFGAPQGPGGPGGYGPPPPGGPGAPGSYGPPQGGPGGFGPPP 437
Query: 485 PPXXGXF 465
P G +
Sbjct: 438 PGGPGAY 444
>AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein.
Length = 468
Score = 29.5 bits (63), Expect = 3.4
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = -1
Query: 489 PPPXPGXFFXKKXXPPPPPPP 427
PPP P PPPPPPP
Sbjct: 236 PPPLPPVGAGAPPPPPPPPPP 256
>AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated
protein 34, isoform b protein.
Length = 310
Score = 29.5 bits (63), Expect = 3.4
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = -1
Query: 489 PPPXPGXFFXKKXXPPPPPPP 427
PPP P PPPPPPP
Sbjct: 222 PPPLPPVGAGAPPPPPPPPPP 242
>AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated
protein 34, isoform a protein.
Length = 454
Score = 29.5 bits (63), Expect = 3.4
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = -1
Query: 489 PPPXPGXFFXKKXXPPPPPPP 427
PPP P PPPPPPP
Sbjct: 222 PPPLPPVGAGAPPPPPPPPPP 242
>Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical
protein C33B4.3b protein.
Length = 993
Score = 29.1 bits (62), Expect = 4.5
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = -1
Query: 489 PPPXPGXFFXKKXXPPPPPPP 427
PPP P PPPPPPP
Sbjct: 794 PPPPPPLPPISSGAPPPPPPP 814
Score = 29.1 bits (62), Expect = 4.5
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = -1
Query: 489 PPPXPGXFFXKKXXPPPPPPP 427
PPP P PPPPPPP
Sbjct: 795 PPPPPLPPISSGAPPPPPPPP 815
>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical
protein C33B4.3a protein.
Length = 1110
Score = 29.1 bits (62), Expect = 4.5
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = -1
Query: 489 PPPXPGXFFXKKXXPPPPPPP 427
PPP P PPPPPPP
Sbjct: 794 PPPPPPLPPISSGAPPPPPPP 814
Score = 29.1 bits (62), Expect = 4.5
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = -1
Query: 489 PPPXPGXFFXKKXXPPPPPPP 427
PPP P PPPPPPP
Sbjct: 795 PPPPPLPPISSGAPPPPPPPP 815
>U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical
protein R144.4a protein.
Length = 360
Score = 29.1 bits (62), Expect = 4.5
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = -1
Query: 489 PPPXPGXFFXKKXXPPPPPP 430
PPP P K PPPPPP
Sbjct: 159 PPPPPVSVPSSKPTPPPPPP 178
>U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical
protein R144.4b protein.
Length = 362
Score = 29.1 bits (62), Expect = 4.5
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = -1
Query: 489 PPPXPGXFFXKKXXPPPPPP 430
PPP P K PPPPPP
Sbjct: 159 PPPPPVSVPSSKPTPPPPPP 178
>AF067611-2|AAW88406.1| 2302|Caenorhabditis elegans Cadherin family
protein 10 protein.
Length = 2302
Score = 29.1 bits (62), Expect = 4.5
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = -1
Query: 489 PPPXPGXFFXKKXXPPPPPP 430
PPP PG + PPPPPP
Sbjct: 2278 PPPPPG-YMHTPPLPPPPPP 2296
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 29.1 bits (62), Expect = 4.5
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = -1
Query: 489 PPPXPGXFFXKKXXPPPPPPP 427
PPP P PPPPPPP
Sbjct: 1342 PPPPPPPSDDLTPVPPPPPPP 1362
Score = 29.1 bits (62), Expect = 4.5
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = -1
Query: 489 PPPXPGXFFXKKXXPPPPPPP 427
PPP P PPPPPPP
Sbjct: 1343 PPPPPPSDDLTPVPPPPPPPP 1363
Score = 28.3 bits (60), Expect = 7.9
Identities = 11/28 (39%), Positives = 12/28 (42%)
Frame = -1
Query: 486 PPXPGXFFXKKXXPPPPPPPXXXXRXGP 403
PP P F PPPPPP + P
Sbjct: 1377 PPPPPLFSPSMILPPPPPPLPSEEKKNP 1404
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 29.1 bits (62), Expect = 4.5
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = -1
Query: 489 PPPXPGXFFXKKXXPPPPPPPXXXXRXGP 403
PPP P PPPPPP GP
Sbjct: 561 PPPPPPPLPQNLSGAPPPPPPPPPMLGGP 589
>AL132860-5|CAB60515.1| 798|Caenorhabditis elegans Hypothetical
protein Y56A3A.6 protein.
Length = 798
Score = 25.8 bits (54), Expect(2) = 5.0
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = -1
Query: 459 KKXXPPPPPPP 427
K+ PPPPPPP
Sbjct: 130 KRAAPPPPPPP 140
Score = 21.4 bits (43), Expect(2) = 5.0
Identities = 7/13 (53%), Positives = 7/13 (53%)
Frame = -1
Query: 444 PPPPPPXXXXRXG 406
PPPPPP G
Sbjct: 180 PPPPPPHRKQENG 192
>Z81592-1|CAB04725.1| 695|Caenorhabditis elegans Hypothetical
protein T16G1.1 protein.
Length = 695
Score = 28.7 bits (61), Expect = 6.0
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = -1
Query: 489 PPPXPGXFFXKKXXPPPPPPP 427
PP G ++ PPPPPPP
Sbjct: 520 PPSSSGSGSNRRSGPPPPPPP 540
>Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical
protein ZC168.5 protein.
Length = 172
Score = 28.7 bits (61), Expect = 6.0
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = -1
Query: 489 PPPXPGXFFXKKXXPPPPPPP 427
PPP P PPPPPPP
Sbjct: 40 PPPPPPPCGGGYEAPPPPPPP 60
>U53153-1|AAC69039.4| 715|Caenorhabditis elegans Hypothetical
protein T19A5.3a protein.
Length = 715
Score = 28.7 bits (61), Expect = 6.0
Identities = 14/37 (37%), Positives = 15/37 (40%)
Frame = +2
Query: 476 GXGGGXFFXXGXXXXXXGKXCXRGAPXGGEXVXPPXG 586
G GGG F G G G+P GG PP G
Sbjct: 483 GGGGGGFGGGGGGFGGGGGGFGSGSPFGGAAPSPPSG 519
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 28.7 bits (61), Expect = 6.0
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = -1
Query: 489 PPPXPGXFFXKKXXPPPPPPP 427
PPP P PPPPPPP
Sbjct: 124 PPPPPRKSRAGGSSPPPPPPP 144
>U39650-4|AAK39186.1| 944|Caenorhabditis elegans Apical junction
molecule protein1, isoform b protein.
Length = 944
Score = 28.7 bits (61), Expect = 6.0
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = -1
Query: 486 PPXPGXFFXKKXXPPPPPPP 427
PP P PPPPPPP
Sbjct: 15 PPPPASVVLHPSAPPPPPPP 34
>U39650-3|AAK39188.1| 1148|Caenorhabditis elegans Apical junction
molecule protein1, isoform c protein.
Length = 1148
Score = 28.7 bits (61), Expect = 6.0
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = -1
Query: 486 PPXPGXFFXKKXXPPPPPPP 427
PP P PPPPPPP
Sbjct: 15 PPPPASVVLHPSAPPPPPPP 34
>U39650-2|AAM51517.1| 1439|Caenorhabditis elegans Apical junction
molecule protein1, isoform d protein.
Length = 1439
Score = 28.7 bits (61), Expect = 6.0
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = -1
Query: 486 PPXPGXFFXKKXXPPPPPPP 427
PP P PPPPPPP
Sbjct: 15 PPPPASVVLHPSAPPPPPPP 34
>U39650-1|AAK39187.1| 1480|Caenorhabditis elegans Apical junction
molecule protein1, isoform a protein.
Length = 1480
Score = 28.7 bits (61), Expect = 6.0
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = -1
Query: 486 PPXPGXFFXKKXXPPPPPPP 427
PP P PPPPPPP
Sbjct: 15 PPPPASVVLHPSAPPPPPPP 34
>AC024790-13|AAL32247.1| 311|Caenorhabditis elegans Hypothetical
protein Y47D7A.13 protein.
Length = 311
Score = 28.7 bits (61), Expect = 6.0
Identities = 15/34 (44%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
Frame = +1
Query: 481 GGGGFFFXXXPPPPPXKEXXXGG-PXGGGXRKXP 579
GGGG PPPPP GG P GG P
Sbjct: 22 GGGGGGCCAPPPPPPCGGGCGGGAPAAGGYAVAP 55
>U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical
protein F25B5.7c protein.
Length = 282
Score = 28.3 bits (60), Expect = 7.9
Identities = 15/40 (37%), Positives = 16/40 (40%), Gaps = 1/40 (2%)
Frame = -2
Query: 614 PGXXXXXXPPXXGXLRXPPP-XGPPXXXSFXGGGGGXXXK 498
PG PP G + PPP G P GG GG K
Sbjct: 184 PGHGGQGGPPGHGGMGGPPPGQGGPGGPGGPGGPGGMLPK 223
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 28.3 bits (60), Expect = 7.9
Identities = 15/40 (37%), Positives = 16/40 (40%), Gaps = 1/40 (2%)
Frame = -2
Query: 614 PGXXXXXXPPXXGXLRXPPP-XGPPXXXSFXGGGGGXXXK 498
PG PP G + PPP G P GG GG K
Sbjct: 464 PGHGGQGGPPGHGGMGGPPPGQGGPGGPGGPGGPGGMLPK 503
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 23.4 bits (48), Expect(2) = 9.0
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = -2
Query: 563 PPPXGPPXXXSFXGGGGG 510
PPP P GGGGG
Sbjct: 54 PPPPPPACGGGCGGGGGG 71
Score = 23.0 bits (47), Expect(2) = 9.0
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = -2
Query: 524 GGGGGXXXKKXPPPPXXG 471
GGG G PPPP G
Sbjct: 102 GGGCGGGCAPPPPPPACG 119
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,462,984
Number of Sequences: 27780
Number of extensions: 251392
Number of successful extensions: 2408
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 653
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1790
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2276333906
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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