Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP04_F_D04
(966 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_02_0048 - 10626467-10627498,10628522-10628617 33 0.26
07_01_0091 - 692416-693906 33 0.34
07_03_1697 - 28795521-28797328,28797430-28797550 32 0.60
09_02_0362 + 7860088-7860197,7861606-7861636,7861738-7861801,786... 31 1.0
07_01_0716 + 5472618-5472818,5472943-5472985,5473672-5473761,547... 31 1.0
06_03_0996 + 26731442-26732121,26732573-26732772,26732930-26733330 31 1.0
01_06_1106 + 34563368-34563679 31 1.8
05_07_0256 + 28713134-28713964 30 2.4
06_01_0741 - 5510159-5510581,5510862-5511124,5511223-5511400,551... 30 3.2
05_06_0229 + 26573722-26575014 30 3.2
02_05_0496 - 29499959-29500653,29501039-29501093 30 3.2
10_08_0631 - 19435796-19436452,19437237-19438130 29 4.2
06_01_0738 + 5458182-5458374,5460512-5461766,5461861-5462053,546... 29 4.2
04_03_0999 - 21600231-21600788,21600896-21601056,21601149-216012... 29 4.2
01_03_0260 - 14323503-14323603,14323751-14323990,14324212-143242... 29 4.2
05_07_0359 - 29539294-29540832,29542366-29542518 29 5.5
10_01_0006 + 74000-76441 29 7.3
04_01_0069 - 697811-697876,697956-698166,698265-698359,698448-69... 29 7.3
03_06_0354 - 33333634-33333840,33334106-33334213,33335384-333355... 29 7.3
02_01_0085 + 610872-611297 29 7.3
10_01_0216 - 2329413-2330419,2331382-2331537,2332363-2332897,233... 28 9.7
09_02_0082 - 4060018-4061604 28 9.7
05_07_0146 + 28018236-28018580,28018670-28018777,28018984-280191... 28 9.7
05_04_0386 + 20822376-20822982,20823715-20824244,20824315-20825127 28 9.7
04_04_1286 + 32387687-32387908,32388046-32389494 28 9.7
>01_02_0048 - 10626467-10627498,10628522-10628617
Length = 375
Score = 33.5 bits (73), Expect = 0.26
Identities = 22/61 (36%), Positives = 31/61 (50%), Gaps = 3/61 (4%)
Frame = -2
Query: 371 VVPRVRVGSALQVDXEPL--CAGRHSALDAEHAPWVHAAR-DGVHAQVSSGLYIGRYCHF 201
V+P + +ALQ++ EP+ C G A A P H R DGVH ++ S + Y F
Sbjct: 28 VLPFMESSTALQMESEPIVGCDGDGCASGAGTWPLHHFRRLDGVHCRLCSSCLLLEYRSF 87
Query: 200 Y 198
Y
Sbjct: 88 Y 88
>07_01_0091 - 692416-693906
Length = 496
Score = 33.1 bits (72), Expect = 0.34
Identities = 27/71 (38%), Positives = 30/71 (42%), Gaps = 1/71 (1%)
Frame = +2
Query: 215 CRYTTRMIPVRAPHPGRHVPRAHAPHPGQSAARRTEVRDQPAVR-TQHGPAGRHRAAPQL 391
C R +RAP P PRA H R V PA R +H P R R AP
Sbjct: 212 CPAPARQPVLRAPPPPPPAPRAPVYHHPLPLGPRVAVLAAPAPRPARHAPV-RARVAP-- 268
Query: 392 PLRGDVRRAEP 424
P+ V RAEP
Sbjct: 269 PVYRAVARAEP 279
>07_03_1697 - 28795521-28797328,28797430-28797550
Length = 642
Score = 32.3 bits (70), Expect = 0.60
Identities = 22/65 (33%), Positives = 27/65 (41%), Gaps = 4/65 (6%)
Frame = +2
Query: 254 HPGRHVPRAH----APHPGQSAARRTEVRDQPAVRTQHGPAGRHRAAPQLPLRGDVRRAE 421
H RH P H PH G+ A + RTQ PA R AA + V+R
Sbjct: 357 HDARHGPSCHHGCCPPHHGKQACTSCRGQHCCRPRTQESPAPRRPAA--AAAKEVVKRRA 414
Query: 422 PPQQH 436
PP+ H
Sbjct: 415 PPRNH 419
>09_02_0362 +
7860088-7860197,7861606-7861636,7861738-7861801,
7861922-7862052,7863575-7863784,7863891-7863956,
7864868-7865075,7866270-7866325,7866406-7867128,
7868246-7868299,7868667-7868695,7869501-7869585,
7870032-7870202,7870246-7870827
Length = 839
Score = 31.5 bits (68), Expect = 1.0
Identities = 17/47 (36%), Positives = 29/47 (61%), Gaps = 5/47 (10%)
Frame = -2
Query: 581 LQPVRELAEVHAVQRHLEGARLAQHQRL--EGLPVGVQR---HPARR 456
LQP +L + H +Q+ L+ +L QH +L +GLP+ Q+ HP ++
Sbjct: 678 LQPQNQLQQQHQLQQQLQQQQLQQHMQLQTQGLPLQQQQSQGHPLQQ 724
>07_01_0716 +
5472618-5472818,5472943-5472985,5473672-5473761,
5473863-5473938,5474435-5474504,5474911-5475075,
5475261-5475404,5475547-5475651,5475876-5476022,
5476463-5476531,5476882-5476989,5477392-5477483,
5477559-5477598,5478129-5478221,5478386-5478958,
5479596-5479610
Length = 676
Score = 31.5 bits (68), Expect = 1.0
Identities = 19/46 (41%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Frame = -3
Query: 547 PFSATLRARGSHSTSASK--VSPLACSGIPPAVSSAPQLMLLRWFR 416
P S+ + A GS +T A + S SGIPPA S P + L W R
Sbjct: 540 PSSSAVTAGGSTATIAGEGSTSDSGLSGIPPAASPPPPPLPLSWRR 585
>06_03_0996 + 26731442-26732121,26732573-26732772,26732930-26733330
Length = 426
Score = 31.5 bits (68), Expect = 1.0
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = -3
Query: 550 TPFSATLRARGSHSTSASKVSPLACSGIPPAVSSAPQL 437
T + L +G H+ +A++ + L G PP SSAPQ+
Sbjct: 309 TSVISCLPEQGKHAAAAARPTALTLGGAPPHESSAPQI 346
>01_06_1106 + 34563368-34563679
Length = 103
Score = 30.7 bits (66), Expect = 1.8
Identities = 22/64 (34%), Positives = 24/64 (37%), Gaps = 5/64 (7%)
Frame = +2
Query: 251 PHPGRHVPRAHAPHP-----GQSAARRTEVRDQPAVRTQHGPAGRHRAAPQLPLRGDVRR 415
P PGR P A AP P G + RR R R +HGP H
Sbjct: 33 PRPGRVPPSASAPPPAELRHGPNRCRRPPWRRLQPARLRHGPDKHHLQLGSAVASPLALV 92
Query: 416 AEPP 427
AEPP
Sbjct: 93 AEPP 96
>05_07_0256 + 28713134-28713964
Length = 276
Score = 30.3 bits (65), Expect = 2.4
Identities = 22/64 (34%), Positives = 28/64 (43%)
Frame = +2
Query: 239 PVRAPHPGRHVPRAHAPHPGQSAARRTEVRDQPAVRTQHGPAGRHRAAPQLPLRGDVRRA 418
PV A P VP A + P AA D+ AVR A R + ++ RG RRA
Sbjct: 134 PVVAAPPAPVVPCAPSVAPAAPAAAAA-FEDKQAVRVNKARAPRRSRSEKMGSRGAFRRA 192
Query: 419 EPPQ 430
P+
Sbjct: 193 VSPE 196
>06_01_0741 -
5510159-5510581,5510862-5511124,5511223-5511400,
5511411-5511698,5511801-5511899,5511973-5512440,
5512559-5512744,5512887-5513004,5513035-5513228
Length = 738
Score = 29.9 bits (64), Expect = 3.2
Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Frame = -2
Query: 572 VRELAEVHAVQRHL--EGARLAQHQRLEGLPVGVQRHPARRLLGAPAHVAEVVP 417
V E + ++ + R L GA H+ L L +R+ + LG P H+A V P
Sbjct: 460 VEEKSPINVLYRDLVLSGAAFGAHRWLAALQRACERYASLVALGVPHHIAGVTP 513
>05_06_0229 + 26573722-26575014
Length = 430
Score = 29.9 bits (64), Expect = 3.2
Identities = 20/64 (31%), Positives = 25/64 (39%), Gaps = 3/64 (4%)
Frame = -3
Query: 316 APGGTLPWMRSMRPGYMPPGMGCT---HRYHPGCISAGTAIFILFH*VSNVWACLAVLYY 146
AP LPW+ R G PP C R HP + G F W LAV
Sbjct: 51 APPPPLPWLLLPRAGGRPPTFSCALSGFRTHPFLVPRGAHRARYFGSYDGEWVFLAVDGQ 110
Query: 145 GSKS 134
G+++
Sbjct: 111 GNQA 114
>02_05_0496 - 29499959-29500653,29501039-29501093
Length = 249
Score = 29.9 bits (64), Expect = 3.2
Identities = 18/59 (30%), Positives = 24/59 (40%)
Frame = +2
Query: 218 RYTTRMIPVRAPHPGRHVPRAHAPHPGQSAARRTEVRDQPAVRTQHGPAGRHRAAPQLP 394
R R + A + +P A PH QS + + PA + QHGP H A P
Sbjct: 47 RPVARTVTFSAANSVYVIPPAEPPHQ-QSPEPQPQTPPPPAQQQQHGPEHEHHQAQPQP 104
>10_08_0631 - 19435796-19436452,19437237-19438130
Length = 516
Score = 29.5 bits (63), Expect = 4.2
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = -3
Query: 499 SKVSPLACSGIPPAVSSAPQLMLLRWFRTTHISTKRKLRCS 377
SK L CS IP +S L RTT I TK+ ++C+
Sbjct: 476 SKRWHLVCSNIPNNISYLVSTFTLANCRTTDIGTKKVMQCA 516
>06_01_0738 +
5458182-5458374,5460512-5461766,5461861-5462053,
5462151-5462344,5462443-5462601,5462683-5463025
Length = 778
Score = 29.5 bits (63), Expect = 4.2
Identities = 23/61 (37%), Positives = 28/61 (45%), Gaps = 3/61 (4%)
Frame = +1
Query: 646 GAQXPPPANMYMS*TP--RGTAGYGGSGXPALREPXGLTGPASQGV-LXERVRXGGASXT 816
G PPP N+ S TP +G+ G GG G PA G PA+ V GG S +
Sbjct: 86 GGSAPPPGNLAGSGTPPAKGSGGDGG-GAPANNSTSG-GAPANSAVEQSSPAGDGGGSPS 143
Query: 817 T 819
T
Sbjct: 144 T 144
>04_03_0999 -
21600231-21600788,21600896-21601056,21601149-21601241,
21601379-21601531,21601917-21601992,21602078-21602197,
21602348-21602597,21602917-21603008,21603408-21603581
Length = 558
Score = 29.5 bits (63), Expect = 4.2
Identities = 19/53 (35%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Frame = +1
Query: 181 KLNEKE*KWQYLPIYNPDDTCACTPSRAACTQGACSASRAECRPA-HRGSXST 336
K N E + +Y P + TC T S ACT CS + +C P R ST
Sbjct: 424 KHNHSELQEEYRPSQVEEATCCGTDSCGACT---CSDAAQQCNPGPERSENST 473
>01_03_0260 - 14323503-14323603,14323751-14323990,14324212-14324275,
14324349-14324654,14324841-14325055,14325551-14325845,
14325965-14326129,14326324-14327352,14333553-14333814,
14334135-14334631,14338714-14340123
Length = 1527
Score = 29.5 bits (63), Expect = 4.2
Identities = 14/27 (51%), Positives = 16/27 (59%)
Frame = -3
Query: 466 PPAVSSAPQLMLLRWFRTTHISTKRKL 386
P V P LML WFR +IST R+L
Sbjct: 1105 PSVVLVVPLLMLNLWFRKYYISTSREL 1131
>05_07_0359 - 29539294-29540832,29542366-29542518
Length = 563
Score = 29.1 bits (62), Expect = 5.5
Identities = 17/60 (28%), Positives = 25/60 (41%)
Frame = +2
Query: 236 IPVRAPHPGRHVPRAHAPHPGQSAARRTEVRDQPAVRTQHGPAGRHRAAPQLPLRGDVRR 415
+PV PGR PR + S + ++R + GP + A PLR V+R
Sbjct: 154 VPVLEAKPGRGRPRKNPLPVASSTSSAAAAATALSLRVKRGPGRPRKNAAATPLRLGVKR 213
>10_01_0006 + 74000-76441
Length = 813
Score = 28.7 bits (61), Expect = 7.3
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = -3
Query: 340 CRLIXNLCAPGGTLPWMRSMRPGYMPPGMGC 248
C+ N+C P G PGY P G+GC
Sbjct: 277 CQGEANICVPQGADNTTCVCPPGYRPQGLGC 307
>04_01_0069 -
697811-697876,697956-698166,698265-698359,698448-698513,
698595-698643,698720-698770,698856-698908,699263-699331,
699874-699928,700011-700099,700217-700302,700376-700432,
700575-700716,701637-702032
Length = 494
Score = 28.7 bits (61), Expect = 7.3
Identities = 21/64 (32%), Positives = 27/64 (42%), Gaps = 4/64 (6%)
Frame = +2
Query: 251 PHPGRHVPRAHAPHPGQSAARRTEVRDQPAVRTQHGPAGRH----RAAPQLPLRGDVRRA 418
P P P A AP P Q RR+ + PA P G H RAA +P+ +
Sbjct: 9 PRPAP-TPPAPAPAPPQVFLRRSVLPPPPAPHHAPPPPGAHVHYFRAASPIPIFRAAASS 67
Query: 419 EPPQ 430
PP+
Sbjct: 68 RPPR 71
>03_06_0354 -
33333634-33333840,33334106-33334213,33335384-33335557,
33335637-33335765,33335858-33336145,33336257-33336489,
33336607-33337435
Length = 655
Score = 28.7 bits (61), Expect = 7.3
Identities = 29/113 (25%), Positives = 43/113 (38%), Gaps = 10/113 (8%)
Frame = +3
Query: 210 VPADIQPG*YLCVHPIPGGMYPGRMLRI----QGRVPPGAQRFXINLQCGPNTDPRDDIA 377
+P + G Y+ V P + R +I +G P +F + LQ D D
Sbjct: 172 LPCGLTLGSYITVAATPRAAHADRDPKITLVREGDEPIMVSQFMMELQGLKTVDGEDPPR 231
Query: 378 -LHLNFRFV-----EMCVVRNHLSNMSWGAEETAGGMPLHANGETFEALVLCE 518
LH N R + + +N M WG G A+ ET + +V CE
Sbjct: 232 ILHFNPRLRGDWSGKPVIEQNTCYRMQWGTSLRCEGWRSRADEETVDGMVKCE 284
>02_01_0085 + 610872-611297
Length = 141
Score = 28.7 bits (61), Expect = 7.3
Identities = 13/38 (34%), Positives = 18/38 (47%)
Frame = +1
Query: 229 PDDTCACTPSRAACTQGACSASRAECRPAHRGSXSTCS 342
PD +C PSR +G +AS A RP+ C+
Sbjct: 92 PDPPTSCPPSRQISDRGRAAASPARSRPSSPRPQPCCA 129
>10_01_0216 -
2329413-2330419,2331382-2331537,2332363-2332897,
2333026-2333514
Length = 728
Score = 28.3 bits (60), Expect = 9.7
Identities = 19/78 (24%), Positives = 37/78 (47%), Gaps = 4/78 (5%)
Frame = -3
Query: 574 RCGNSQKCTPFSATLRA-RGSH---STSASKVSPLACSGIPPAVSSAPQLMLLRWFRTTH 407
R G KC T ++ RG+ + + + +ACSG+PP V A ++ L + + T
Sbjct: 410 RIGEGFKCKYCKMTRKSGRGTRLKEHLAGRRHNVIACSGVPPKVRKAMRISLNKVKQRTK 469
Query: 406 ISTKRKLRCSAMSSRGSV 353
+ R+ + +++ V
Sbjct: 470 AAKNRRAKMKKPNTQNMV 487
>09_02_0082 - 4060018-4061604
Length = 528
Score = 28.3 bits (60), Expect = 9.7
Identities = 16/49 (32%), Positives = 23/49 (46%)
Frame = +2
Query: 197 NKNGSTCRYTTRMIPVRAPHPGRHVPRAHAPHPGQSAARRTEVRDQPAV 343
+ + +T R T + +RAP P VPRA AP A + PA+
Sbjct: 227 SSSSATPRVRTTSLALRAPAPHLRVPRAPAPPVPAPLAPTPPIPTPPAL 275
>05_07_0146 +
28018236-28018580,28018670-28018777,28018984-28019148,
28019269-28019736,28019823-28019936,28020038-28020715
Length = 625
Score = 28.3 bits (60), Expect = 9.7
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 3/49 (6%)
Frame = -2
Query: 461 RRLLGAPAHVAEVVPHDAHLHEAEVEVQRDVVPR--VRVGSA-LQVDXE 324
R +L AP H E++ + E + Q+ ++PR + +GSA LQ D E
Sbjct: 195 RSVLAAPIHQQELLDPEKKEQEGSQQQQQQLIPRQFISLGSASLQPDVE 243
>05_04_0386 + 20822376-20822982,20823715-20824244,20824315-20825127
Length = 649
Score = 28.3 bits (60), Expect = 9.7
Identities = 22/76 (28%), Positives = 29/76 (38%), Gaps = 4/76 (5%)
Frame = +3
Query: 264 GMYPGRMLRIQGRVPPGAQRFXINLQCGPNTDPRDDIALHLNFRFVEMCVVRNHLSNMSW 443
G YP + I+G V Q F + CG D ALH + VV N + S+
Sbjct: 256 GQYPVHIAAIKGHVHIVDQFFELYPNCGELLDNNGRNALHCAIEHGRIKVVTNICKSPSF 315
Query: 444 ----GAEETAGGMPLH 479
+ G PLH
Sbjct: 316 TQMMNTRDKQGNTPLH 331
>04_04_1286 + 32387687-32387908,32388046-32389494
Length = 556
Score = 28.3 bits (60), Expect = 9.7
Identities = 20/85 (23%), Positives = 37/85 (43%), Gaps = 4/85 (4%)
Frame = -3
Query: 517 SHSTSASKVSPLACSGIPPAVSSAPQLMLLRWFRTTHISTKRKLRCSAMSS--RGSVLGP 344
+ + ++K +A +P + + + WF+TT + K R A+ S R + L
Sbjct: 194 AEAEKSTKYGQIAAEELPKGLYCLGVRLTMEWFKTTELQRKFTERSPAVQSNLRDNSLYH 253
Query: 343 HCRLIXNLCAPGGTL--PWMRSMRP 275
+C N+ A + + SMRP
Sbjct: 254 YCVFSDNILAVSVVVNSTTLNSMRP 278
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,871,776
Number of Sequences: 37544
Number of extensions: 504921
Number of successful extensions: 1897
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1798
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1893
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2799822860
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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