Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP04_F_D04
         (966 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z69982-1|CAA93822.1|  143|Anopheles gambiae lectin protein.            91   5e-20
DQ004399-1|AAY21238.1|  847|Anopheles gambiae lysozyme c-6 protein.    31   0.052
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    28   0.48 
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    27   0.84 
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    26   1.9  
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    26   1.9  
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript...    25   3.4  

>Z69982-1|CAA93822.1|  143|Anopheles gambiae lectin protein.
          Length = 143

 Score = 91.1 bits (216), Expect = 5e-20
 Identities = 42/108 (38%), Positives = 66/108 (61%)
 Frame = +3

Query: 255 IPGGMYPGRMLRIQGRVPPGAQRFXINLQCGPNTDPRDDIALHLNFRFVEMCVVRNHLSN 434
           +P G+   R + I+GR+     +F INLQ GPNT+PRDD ALH++ R  +  ++RN +  
Sbjct: 17  MPAGLGIYRKITIRGRMTH--DQFNINLQTGPNTNPRDDTALHISIRPRDGVIIRNSIQF 74

Query: 435 MSWGAEETAGGMPLHANGETFEALVLCEPRALKVALNGVHFCEFPHRL 578
            +WG EE  GG P+      F+  +  +P +  +A+NG H+C+F HR+
Sbjct: 75  RNWGIEERFGGCPVQKK-SYFDVTITVKPDSYGIAVNGAHYCDFNHRM 121


>DQ004399-1|AAY21238.1|  847|Anopheles gambiae lysozyme c-6 protein.
          Length = 847

 Score = 31.1 bits (67), Expect = 0.052
 Identities = 15/44 (34%), Positives = 24/44 (54%)
 Frame = -3

Query: 547 PFSATLRARGSHSTSASKVSPLACSGIPPAVSSAPQLMLLRWFR 416
           PF++ LRA  S +T +S       + +PP V++A      RWF+
Sbjct: 802 PFASRLRATESTATESSSTLSTVTTTLPPVVTTARFSDFNRWFQ 845


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
           cytoskeletal structural protein protein.
          Length = 1645

 Score = 27.9 bits (59), Expect = 0.48
 Identities = 28/94 (29%), Positives = 42/94 (44%), Gaps = 5/94 (5%)
 Frame = +2

Query: 107 THPVSKLFWTLRAVIKHCKARPNV*NSMKKNKNGSTCRYTT--RM---IPVRAPHPGRHV 271
           T P S L   L AV     +R +  +S   + NGST    +  RM   +P +   PG  V
Sbjct: 182 TKPNSPLGSLLAAVTSPVLSRISSASSPNLSSNGSTLSSPSGSRMEYLLPHQQHPPGAGV 241

Query: 272 PRAHAPHPGQSAARRTEVRDQPAVRTQHGPAGRH 373
             A  P P Q   ++ + + Q  +  +HG A +H
Sbjct: 242 QGA-GPIPSQQKHQQHQQQQQSVLLPKHGTARQH 274


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 27.1 bits (57), Expect = 0.84
 Identities = 18/40 (45%), Positives = 19/40 (47%)
 Frame = +1

Query: 703 AGYGGSGXPALREPXGLTGPASQGVLXERVRXGGASXTTR 822
           AG GG+G P LR   G  G  S G        GG S TTR
Sbjct: 839 AGGGGAGGP-LRGSSGGAGGGSSGGGGSGGTSGGGSSTTR 877


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 25.8 bits (54), Expect = 1.9
 Identities = 12/25 (48%), Positives = 17/25 (68%), Gaps = 3/25 (12%)
 Frame = +3

Query: 252 PIPGGMY---PGRMLRIQGRVPPGA 317
           P PGGMY   PG  + ++ ++PPGA
Sbjct: 212 PRPGGMYPQPPGVPMPMRPQMPPGA 236


>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
           growth factor receptorprotein.
          Length = 1433

 Score = 25.8 bits (54), Expect = 1.9
 Identities = 15/33 (45%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
 Frame = -3

Query: 391 KLRCSAMSSRGSVLGPHCRLIXNL-CAPGGTLP 296
           KL CS   S+G   GP  R   +L CA G T P
Sbjct: 181 KLNCSPQCSQGRCFGPKPRECCHLFCAGGCTGP 213


>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1201

 Score = 25.0 bits (52), Expect = 3.4
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = +1

Query: 508 CCASRAPSRWR*TACTSASS 567
           CC  R+P  W    C+S S+
Sbjct: 44  CCVQRSPPHWPYLLCSSCSA 63


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 830,612
Number of Sequences: 2352
Number of extensions: 17811
Number of successful extensions: 35
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 563,979
effective HSP length: 65
effective length of database: 411,099
effective search space used: 105241344
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)