Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP04_F_D03
         (882 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF127647-1|ABL74413.1|  213|Anopheles gambiae Rab5 protein.            75   4e-15
AJ438610-3|CAD27475.1|  190|Anopheles gambiae putative RHO small...    47   7e-07
AY070234-1|AAL58538.1|  223|Anopheles gambiae glutathione S-tran...    29   0.25 
AF026494-1|AAB81852.1|  113|Anopheles gambiae chitinase protein.       26   1.7  
AF316638-1|AAG45166.1|  211|Anopheles gambiae glutathione S-tran...    25   4.0  
AY146745-1|AAO12105.1|  153|Anopheles gambiae odorant-binding pr...    24   7.1  
AJ697725-1|CAG26918.1|  153|Anopheles gambiae putative odorant-b...    24   7.1  
AF437886-1|AAL84181.1|  153|Anopheles gambiae odorant binding pr...    24   7.1  

>EF127647-1|ABL74413.1|  213|Anopheles gambiae Rab5 protein.
          Length = 213

 Score = 74.5 bits (175), Expect = 4e-15
 Identities = 39/114 (34%), Positives = 64/114 (56%), Gaps = 2/114 (1%)
 Frame = +3

Query: 348 RPPAAPKSYDYLLKVLLVGDSDVGKQEILQDLEDGSADSPFCS--GSGYKTTTILLDGKR 521
           RP  A ++     K++L+G+S VGK  ++     G       S  G+ + T T+ +D   
Sbjct: 13  RPNGATQNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTLCIDDTT 72

Query: 522 VKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDSIDRWLEEVEKHA 683
           VK ++WDT+GQ R+ ++   Y RGAQ  ++VYDI N  SF     W++E+++ A
Sbjct: 73  VKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDIQNSDSFARAKTWVKELQRQA 126


>AJ438610-3|CAD27475.1|  190|Anopheles gambiae putative RHO small
           GTPase protein.
          Length = 190

 Score = 47.2 bits (107), Expect = 7e-07
 Identities = 30/104 (28%), Positives = 53/104 (50%), Gaps = 3/104 (2%)
 Frame = +3

Query: 384 LKVLLVGDSDVGKQEILQDLEDGSADSPFCSGS-GYKTTTILLDGKRVKLQLWDTSGQGR 560
           +K ++VGD  VGK  +L      S    +   S    +  +++DG +V L LWDT+GQ  
Sbjct: 7   IKCVVVGDGTVGKTCMLISYTTDSFPGEYVPTSFDNYSAPMVVDGVQVSLGLWDTAGQED 66

Query: 561 FCTIIRSYSRGAQGILLV-YDITNKWSFDSI-DRWLEEVEKHAP 686
           +   +R  S     + L+ Y + +  SF+++  +W  E++ H P
Sbjct: 67  Y-DRLRPLSYPQTDVFLICYSVASPSSFENVTSKWYPEIKHHCP 109


>AY070234-1|AAL58538.1|  223|Anopheles gambiae glutathione
           S-transferase E3 protein.
          Length = 223

 Score = 28.7 bits (61), Expect = 0.25
 Identities = 12/32 (37%), Positives = 21/32 (65%)
 Frame = +1

Query: 52  VRWLLELVFEYCQNKXPVSKWNIINKSYIKLQ 147
           +RW+LE VF + Q + P  K + ++K+Y  L+
Sbjct: 112 LRWILEPVFYWGQTEVPQEKIDSVHKAYDLLE 143


>AF026494-1|AAB81852.1|  113|Anopheles gambiae chitinase protein.
          Length = 113

 Score = 25.8 bits (54), Expect = 1.7
 Identities = 13/49 (26%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
 Frame = +3

Query: 513 GKRVKLQL--WDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDSID 653
           GK+V + +  W+ S   ++  ++RS     + I  V    +K++FD +D
Sbjct: 62  GKKVTVAIGGWNDSAGDKYSRLVRSSQARKRFIENVMKFIDKYNFDGLD 110


>AF316638-1|AAG45166.1|  211|Anopheles gambiae glutathione
           S-transferase D12 protein.
          Length = 211

 Score = 24.6 bits (51), Expect = 4.0
 Identities = 12/39 (30%), Positives = 18/39 (46%)
 Frame = +1

Query: 757 EMYAAKNHMAFFEVSPLCDFNIREKFCELSRMAFTETAW 873
           EMY   +     +   + DF+I   FC L  M +  TA+
Sbjct: 136 EMYLTDSPYVAGQKLTIADFSIFVSFCSLDMMKYDLTAY 174


>AY146745-1|AAO12105.1|  153|Anopheles gambiae odorant-binding
           protein AgamOBP3 protein.
          Length = 153

 Score = 23.8 bits (49), Expect = 7.1
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = +2

Query: 413 CWKTRDPSRF 442
           CWKTRDP  +
Sbjct: 141 CWKTRDPVHY 150


>AJ697725-1|CAG26918.1|  153|Anopheles gambiae putative
           odorant-binding protein OBPjj15 protein.
          Length = 153

 Score = 23.8 bits (49), Expect = 7.1
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = +2

Query: 413 CWKTRDPSRF 442
           CWKTRDP  +
Sbjct: 141 CWKTRDPVHY 150


>AF437886-1|AAL84181.1|  153|Anopheles gambiae odorant binding
           protein protein.
          Length = 153

 Score = 23.8 bits (49), Expect = 7.1
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = +2

Query: 413 CWKTRDPSRF 442
           CWKTRDP  +
Sbjct: 141 CWKTRDPVHY 150


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 912,923
Number of Sequences: 2352
Number of extensions: 18356
Number of successful extensions: 39
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 94680279
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)