Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP04_F_D02
         (921 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF132535-1|AAD31443.1|  710|Drosophila melanogaster ldlCp-relate...    43   7e-04
AE014297-2025|AAF55182.1|  710|Drosophila melanogaster CG6177-PA...    42   9e-04
AY070962-1|AAL48584.1|  710|Drosophila melanogaster RE06205p pro...    41   0.002
AE014134-1604|AAF52747.3| 1125|Drosophila melanogaster CG18241-P...    29   6.8  

>AF132535-1|AAD31443.1|  710|Drosophila melanogaster ldlCp-related
           protein protein.
          Length = 710

 Score = 42.7 bits (96), Expect = 7e-04
 Identities = 27/120 (22%), Positives = 60/120 (50%)
 Frame = +2

Query: 440 KQLNKDVLNVKQSLEDAMKETSMWMSQRHNLQSKKQLLKYYSQTINSLNTLDNVLQNITE 619
           +Q   D+ ++   +++ + E    + ++ +++  K+ L+   +   ++N L +++     
Sbjct: 100 EQFRSDIESIHGLIDENVTELRAQLEEKRHVREFKRGLQSLKKVYETINKLQDLIDRKLS 159

Query: 620 QKMYDKIVLADRAAMQYNQLKFTIKKCDNLVKLEHKTQFTYIEETLVRTLNELLFQFWND 799
            +   K V  +RAA+   QLKF  K C   +  EH+ +   +EE     L++ L +F+ND
Sbjct: 160 GEQPIKAVDLERAALDLIQLKFHEKHCFKHLSPEHQGKIQQLEE----QLHQHLRRFFND 215


>AE014297-2025|AAF55182.1|  710|Drosophila melanogaster CG6177-PA
           protein.
          Length = 710

 Score = 42.3 bits (95), Expect = 9e-04
 Identities = 27/120 (22%), Positives = 59/120 (49%)
 Frame = +2

Query: 440 KQLNKDVLNVKQSLEDAMKETSMWMSQRHNLQSKKQLLKYYSQTINSLNTLDNVLQNITE 619
           +Q   D+ ++   +++ + E    + ++  L+  K+ L+   +   ++N L +++     
Sbjct: 100 EQFRSDIESIHGLIDENVTELRAQLEEKRQLREFKRGLQSLKKVYETINKLQDLIDRKLS 159

Query: 620 QKMYDKIVLADRAAMQYNQLKFTIKKCDNLVKLEHKTQFTYIEETLVRTLNELLFQFWND 799
            +   K V  +RAA+   QLKF  K C   +  +H+ +   +EE     L++ L +F+ND
Sbjct: 160 GEQPIKAVDLERAALDLIQLKFHEKHCFKHLSPDHQGKIQQLEE----QLHQHLRRFFND 215


>AY070962-1|AAL48584.1|  710|Drosophila melanogaster RE06205p
           protein.
          Length = 710

 Score = 41.1 bits (92), Expect = 0.002
 Identities = 26/120 (21%), Positives = 59/120 (49%)
 Frame = +2

Query: 440 KQLNKDVLNVKQSLEDAMKETSMWMSQRHNLQSKKQLLKYYSQTINSLNTLDNVLQNITE 619
           +Q   D+ ++   +++ + E    + ++  L+  K+ L+   +   ++N L +++     
Sbjct: 100 EQFRSDIESIHGLIDENVTELRAQLEEKRQLREFKRGLQSLKKVYETINKLQDLIDRKLS 159

Query: 620 QKMYDKIVLADRAAMQYNQLKFTIKKCDNLVKLEHKTQFTYIEETLVRTLNELLFQFWND 799
            +   K V  +RAA+   QLKF  + C   +  +H+ +   +EE     L++ L +F+ND
Sbjct: 160 GEQPIKAVDLERAALDLIQLKFHERHCFKHLSPDHQGKIQQLEE----QLHQHLRRFFND 215


>AE014134-1604|AAF52747.3| 1125|Drosophila melanogaster CG18241-PA
           protein.
          Length = 1125

 Score = 29.5 bits (63), Expect = 6.8
 Identities = 21/100 (21%), Positives = 47/100 (47%), Gaps = 6/100 (6%)
 Frame = +2

Query: 467 VKQSLEDAMKETSMWMSQRHNLQSKKQLLKYYSQTINSLNTLDNVLQNITEQK--MYDKI 640
           +K    +  ++T++ M +++    K ++       +      +N  +N+T     ++D +
Sbjct: 238 IKIYYHNTFEKTTLTM-EKNIFHGKNKMSALIFNGLKIKGLTNNTFENLTSLNTLIFDNV 296

Query: 641 VLAD----RAAMQYNQLKFTIKKCDNLVKLEHKTQFTYIE 748
            L D    R++   + L + I K DN+V L+   +FT +E
Sbjct: 297 FLKDLSFLRSSTLQSSLTYCIMKVDNMVDLKSFEKFTNLE 336


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,640,883
Number of Sequences: 53049
Number of extensions: 423671
Number of successful extensions: 1100
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1046
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1100
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4525903863
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)