Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP04_F_D02
(921 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF078157-7|AAG24077.2| 285|Caenorhabditis elegans Hypothetical ... 33 0.38
AF078157-6|AAQ62458.1| 406|Caenorhabditis elegans Hypothetical ... 33 0.38
Z92777-10|CAB07172.2| 304|Caenorhabditis elegans Hypothetical p... 31 0.88
Z92777-8|CAJ58494.1| 293|Caenorhabditis elegans Hypothetical pr... 30 2.7
Z81050-12|CAN86586.1| 420|Caenorhabditis elegans Hypothetical p... 29 4.7
Z81050-11|CAN86585.1| 399|Caenorhabditis elegans Hypothetical p... 29 4.7
Z68159-7|CAA92286.1| 604|Caenorhabditis elegans Hypothetical pr... 29 4.7
U53150-1|AAA96123.2| 302|Caenorhabditis elegans Serpentine rece... 28 8.2
>AF078157-7|AAG24077.2| 285|Caenorhabditis elegans Hypothetical
protein F25E5.6a protein.
Length = 285
Score = 32.7 bits (71), Expect = 0.38
Identities = 22/99 (22%), Positives = 41/99 (41%)
Frame = +2
Query: 431 CH*KQLNKDVLNVKQSLEDAMKETSMWMSQRHNLQSKKQLLKYYSQTINSLNTLDNVLQN 610
C K +N + + + + E A + + Q + QTINS++ ++ +Q
Sbjct: 78 CVLKGMNPNAMQIDEKEESAKNYKHLKKLKNQYCQKDSEHSMEKKQTINSIDAIETKMQK 137
Query: 611 ITEQKMYDKIVLADRAAMQYNQLKFTIKKCDNLVKLEHK 727
+ + Y +I L YN TI + + LE+K
Sbjct: 138 LVDALSYLEIKLRKFRLSAYNPHWSTIPCLEEFLLLENK 176
>AF078157-6|AAQ62458.1| 406|Caenorhabditis elegans Hypothetical
protein F25E5.6b protein.
Length = 406
Score = 32.7 bits (71), Expect = 0.38
Identities = 22/99 (22%), Positives = 41/99 (41%)
Frame = +2
Query: 431 CH*KQLNKDVLNVKQSLEDAMKETSMWMSQRHNLQSKKQLLKYYSQTINSLNTLDNVLQN 610
C K +N + + + + E A + + Q + QTINS++ ++ +Q
Sbjct: 78 CVLKGMNPNAMQIDEKEESAKNYKHLKKLKNQYCQKDSEHSMEKKQTINSIDAIETKMQK 137
Query: 611 ITEQKMYDKIVLADRAAMQYNQLKFTIKKCDNLVKLEHK 727
+ + Y +I L YN TI + + LE+K
Sbjct: 138 LVDALSYLEIKLRKFRLSAYNPHWSTIPCLEEFLLLENK 176
>Z92777-10|CAB07172.2| 304|Caenorhabditis elegans Hypothetical
protein C17H1.8 protein.
Length = 304
Score = 31.5 bits (68), Expect = 0.88
Identities = 15/63 (23%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Frame = +2
Query: 440 KQLNKDVLNVKQSLEDAMKETSMWMSQRHNLQSKKQLLKYYSQTINSLN-TLDNVLQNIT 616
+QL + + N++ + KE ++H L +K+++++ + +TI++LN ++ +++
Sbjct: 46 EQLKRSIQNMEHDMRMQAKEEQRSDIEKHEL-TKREIIEQHQETISNLNRSMSEAEKSMR 104
Query: 617 EQK 625
EQK
Sbjct: 105 EQK 107
>Z92777-8|CAJ58494.1| 293|Caenorhabditis elegans Hypothetical
protein C17H1.13 protein.
Length = 293
Score = 29.9 bits (64), Expect = 2.7
Identities = 15/63 (23%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Frame = +2
Query: 440 KQLNKDVLNVKQSLEDAMKETSMWMSQRHNLQSKKQLLKYYSQTINSLN-TLDNVLQNIT 616
+Q ++ N++ S+ KE + H L+ K+++++ + +TI++LN ++ +++
Sbjct: 35 EQFRSNIQNMEHSMRMQAKEEQRSDIENHELR-KREIIEKHQETISNLNRSMSEAEKSMR 93
Query: 617 EQK 625
EQK
Sbjct: 94 EQK 96
>Z81050-12|CAN86586.1| 420|Caenorhabditis elegans Hypothetical
protein C50B6.14b protein.
Length = 420
Score = 29.1 bits (62), Expect = 4.7
Identities = 21/77 (27%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Frame = +2
Query: 446 LNKDVLNVKQSLEDAMKETSMWMSQRHN-LQSKKQLLKYYSQTINSLNTLDNVLQNITEQ 622
+N L V ++ D +KE + + N ++KQL+ +NSL +++N +Q I +
Sbjct: 97 MNPHALEVDKTNTDCLKEVTKRKNMIGNDAVNEKQLV------LNSLESMENKIQKIADM 150
Query: 623 KMYDKIVLADRAAMQYN 673
Y ++ L A YN
Sbjct: 151 LTYLELKLDQFRASSYN 167
>Z81050-11|CAN86585.1| 399|Caenorhabditis elegans Hypothetical
protein C50B6.14a protein.
Length = 399
Score = 29.1 bits (62), Expect = 4.7
Identities = 21/77 (27%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Frame = +2
Query: 446 LNKDVLNVKQSLEDAMKETSMWMSQRHN-LQSKKQLLKYYSQTINSLNTLDNVLQNITEQ 622
+N L V ++ D +KE + + N ++KQL+ +NSL +++N +Q I +
Sbjct: 97 MNPHALEVDKTNTDCLKEVTKRKNMIGNDAVNEKQLV------LNSLESMENKIQKIADM 150
Query: 623 KMYDKIVLADRAAMQYN 673
Y ++ L A YN
Sbjct: 151 LTYLELKLDQFRASSYN 167
>Z68159-7|CAA92286.1| 604|Caenorhabditis elegans Hypothetical
protein C33D9.8 protein.
Length = 604
Score = 29.1 bits (62), Expect = 4.7
Identities = 22/101 (21%), Positives = 49/101 (48%), Gaps = 4/101 (3%)
Frame = +2
Query: 443 QLNKDVLNVKQSLEDAMKETSMWMSQRHNLQSKKQLLKYYSQTINSLNTLDNVLQN-ITE 619
QL ++ K + +K+ + + N K + LK ++T ++ N +T+
Sbjct: 420 QLKNELSYTKAVHKRILKDKEQCIEELENRIMKLETLKE-TETFEEKREINKSATNELTD 478
Query: 620 QKM--YDKIVLADRAAMQYNQLKFTIKKCDNLVK-LEHKTQ 733
++ + KI+ + A ++N++K ++ DN+V LE + Q
Sbjct: 479 MEISKFSKIIATGKNARKWNEMKVQFERIDNIVNGLEARYQ 519
>U53150-1|AAA96123.2| 302|Caenorhabditis elegans Serpentine
receptor, class sx protein32 protein.
Length = 302
Score = 28.3 bits (60), Expect = 8.2
Identities = 18/79 (22%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Frame = -1
Query: 648 ASTILSYIFCSVIFCKTLSNVLRLFIVWL*YFSNC-FLLCKLC-R*LIHMEVSFIASSRL 475
A + Y+ CS++ C S ++ LFI + S C +++ C ++H+ F+ + +
Sbjct: 10 APIAIFYLCCSIVSCTGNSIMIILFIKEKNFHSPCHYMITFSCLADMLHLCGHFVFNYHI 69
Query: 474 CFTLRTSLFNCF*WHVYFS 418
+ + NC+ W ++F+
Sbjct: 70 FADVTDTQANCY-WMLFFT 87
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,591,376
Number of Sequences: 27780
Number of extensions: 238438
Number of successful extensions: 641
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 621
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 640
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2360254050
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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