Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP04_F_D01
         (881 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9 prot...    22   5.5  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      22   7.3  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      22   7.3  
AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein pr...    22   7.3  
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    21   9.7  

>DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9
           protein.
          Length = 383

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = -1

Query: 461 FISFVSGENVKLKLVLWLLYRP 396
           F++  S  NV      W +YRP
Sbjct: 14  FLALASAGNVVCYFTSWTIYRP 35


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = +1

Query: 508 PHRLSYRSRRGSNH 549
           PHRL+ RSRR   H
Sbjct: 605 PHRLAARSRRCCYH 618


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = +1

Query: 508 PHRLSYRSRRGSNH 549
           PHRL+ RSRR   H
Sbjct: 497 PHRLAARSRRCCYH 510


>AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein
           protein.
          Length = 203

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = -1

Query: 263 LTFRKFTHQPGPYPDTSSAVHQ 198
           L  RK  H P PYP     +++
Sbjct: 17  LCVRKRPHSPEPYPPRCPPIYE 38


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 8/35 (22%), Positives = 16/35 (45%)
 Frame = +1

Query: 535 RGSNHILLTYDSDXXXXXXASRFLLTDSSDSSDYC 639
           +  + ++  YDS        ++F +TD   +  YC
Sbjct: 21  KAESKVVCYYDSKSHFRQGQAKFEITDLEPALQYC 55


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 194,119
Number of Sequences: 336
Number of extensions: 4033
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24410188
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)