Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP04_F_C24
         (918 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    31   0.049
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    29   0.20 
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    27   1.1  
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    24   5.6  

>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 31.1 bits (67), Expect = 0.049
 Identities = 14/35 (40%), Positives = 15/35 (42%)
 Frame = -3

Query: 808 GGXPGXXXXGGGRXGXGXXVXXXXGGXXXGXRGGG 704
           GG  G    G GR G G  +    GG   G  GGG
Sbjct: 540 GGSDGPEYEGAGRGGVGSGIGGGGGGGGGGRAGGG 574



 Score = 27.9 bits (59), Expect = 0.46
 Identities = 19/59 (32%), Positives = 20/59 (33%)
 Frame = -3

Query: 781 GGGRXGXGXXVXXXXGGXXXGXRGGGXXXXXGXGPXXXXGGXGLGXXXXGGXGXXGXGG 605
           GGG  G G        G   G  GGG       G      G G+G    GG G    GG
Sbjct: 517 GGGGGGSGCVNGSRTVGAG-GMAGGGSDGPEYEGAGRGGVGSGIGGGGGGGGGGRAGGG 574


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 29.1 bits (62), Expect = 0.20
 Identities = 22/68 (32%), Positives = 23/68 (33%), Gaps = 4/68 (5%)
 Frame = +3

Query: 606 PPXPXX--PXPPXXXXP-KP-XPPXXXXGPXPXXXXXPPPRXPXXXPPXXXXTXXPXPXR 773
           PP P    P PP    P +P  PP    G  P     PP       PP       P P R
Sbjct: 211 PPRPGGMYPQPPGVPMPMRPQMPPGAVPGMQPGMQPRPPSAQGMQRPP---MMGQPPPIR 267

Query: 774 PPPXXXXP 797
           PP     P
Sbjct: 268 PPNPMGGP 275



 Score = 24.6 bits (51), Expect = 4.2
 Identities = 17/65 (26%), Positives = 17/65 (26%)
 Frame = +3

Query: 615 PXXPXPPXXXXPKPXPPXXXXGPXPXXXXXPPPRXPXXXPPXXXXTXXPXPXRPPPXXXX 794
           P    PP    P    P    G  P     P P  P   PP       P     PP    
Sbjct: 195 PGNVGPPRTGTPTQPQPPRPGGMYPQPPGVPMPMRP-QMPPGAVPGMQPGMQPRPPSAQG 253

Query: 795 PGXPP 809
              PP
Sbjct: 254 MQRPP 258



 Score = 23.8 bits (49), Expect = 7.4
 Identities = 17/68 (25%), Positives = 18/68 (26%)
 Frame = +3

Query: 606 PPXPXXPXPPXXXXPKPXPPXXXXGPXPXXXXXPPPRXPXXXPPXXXXTXXPXPXRPPPX 785
           PP    P  P    P    P     P P     PP   P   P            + PP 
Sbjct: 200 PPRTGTPTQPQPPRPGGMYPQPPGVPMPMRPQMPPGAVPGMQPGMQPRPPSAQGMQRPPM 259

Query: 786 XXXPGXPP 809
              P  PP
Sbjct: 260 MGQP--PP 265


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 26.6 bits (56), Expect = 1.1
 Identities = 12/28 (42%), Positives = 12/28 (42%)
 Frame = -3

Query: 736 GGXXXGXRGGGXXXXXGXGPXXXXGGXG 653
           GG   G  GGG     G GP    GG G
Sbjct: 205 GGSGGGAPGGGGGSSGGPGPGGGGGGGG 232


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 24.2 bits (50), Expect = 5.6
 Identities = 17/62 (27%), Positives = 17/62 (27%)
 Frame = -3

Query: 799 PGXXXXGGGRXGXGXXVXXXXGGXXXGXRGGGXXXXXGXGPXXXXGGXGLGXXXXGGXGX 620
           PG    GGG  G G  V     G      GGG       G          G     G G 
Sbjct: 650 PGSGGGGGGGGGGGGSVGSGGIGSSSLGGGGGSGRSSSGGGMIGMHSVAAGAAVAAGGGV 709

Query: 619 XG 614
            G
Sbjct: 710 AG 711


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 414,654
Number of Sequences: 2352
Number of extensions: 5301
Number of successful extensions: 21
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 99641691
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)