Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP04_F_C23
         (908 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.          46   2e-06
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            24   5.5  

>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
          Length = 1132

 Score = 45.6 bits (103), Expect = 2e-06
 Identities = 32/96 (33%), Positives = 46/96 (47%), Gaps = 3/96 (3%)
 Frame = +3

Query: 453  LRFAASTNNTELVERLLKAGADPNCSDEHKRSPLHLAACRGYVDVVRILLRHGA---NPN 623
            L  A S N+  +V+ LL AGA  +  D    +PLH A      D+VR+LL  G    +  
Sbjct: 788  LHLAVSCNSEPIVKALLGAGAKLHYCDYRGNTPLHRAVVENVPDMVRLLLLQGGLRLDCT 847

Query: 624  NKDTLGNTPLHLAACTNHITVVIELLDAGTDVSPEE 731
            N D  G T L  A    ++ +   LL+AG  V  ++
Sbjct: 848  NDD--GLTALQAAVYARNLKITRILLEAGASVREKD 881



 Score = 33.5 bits (73), Expect = 0.009
 Identities = 22/60 (36%), Positives = 29/60 (48%)
 Frame = +3

Query: 531 DEHKRSPLHLAACRGYVDVVRILLRHGANPNNKDTLGNTPLHLAACTNHITVVIELLDAG 710
           ++   + LHLA       +V+ LL  GA  +  D  GNTPLH A   N   +V  LL  G
Sbjct: 781 NDRNETGLHLAVSCNSEPIVKALLGAGAKLHYCDYRGNTPLHRAVVENVPDMVRLLLLQG 840


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 24.2 bits (50), Expect = 5.5
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = +3

Query: 243 SDNPVFDHSKCVLEFNLPAIPITQSGQPMPV 335
           S +PV D S+ V    +P++P+  S +P PV
Sbjct: 350 SISPVSDRSESVSP--VPSLPVRSSPEPSPV 378


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 746,688
Number of Sequences: 2352
Number of extensions: 15975
Number of successful extensions: 24
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 98401338
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)