Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP04_F_C22
         (849 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A3J1D0 Cluster: WblQ protein; n=1; Flavobacteria bacter...    36   1.3  
UniRef50_A2EQT4 Cluster: Adenylate and Guanylate cyclase catalyt...    36   1.3  

>UniRef50_A3J1D0 Cluster: WblQ protein; n=1; Flavobacteria bacterium
           BAL38|Rep: WblQ protein - Flavobacteria bacterium BAL38
          Length = 387

 Score = 35.9 bits (79), Expect = 1.3
 Identities = 16/46 (34%), Positives = 29/46 (63%)
 Frame = -1

Query: 393 KDISDNYLSKLSSNKLAVHSFNLVHVKHLFRLIIITYHNETSLQNY 256
           + I+  YLS++ ++K+ + S++L    H+F L +I   N T L+NY
Sbjct: 279 RSIAKRYLSEIKNDKITLPSWDLSK-NHVFHLFVIRTSNRTELKNY 323


>UniRef50_A2EQT4 Cluster: Adenylate and Guanylate cyclase catalytic
           domain containing protein; n=1; Trichomonas vaginalis
           G3|Rep: Adenylate and Guanylate cyclase catalytic domain
           containing protein - Trichomonas vaginalis G3
          Length = 1579

 Score = 35.9 bits (79), Expect = 1.3
 Identities = 12/45 (26%), Positives = 30/45 (66%)
 Frame = +1

Query: 160 HNVLECLLIVVAFXVDLVPSFFIVLLYVCECIVILKGCLIVICNY 294
           H ++  L+IVV+F + + P++++V++Y+C  +  +   L ++ N+
Sbjct: 227 HTMINSLMIVVSFILSIFPNYYMVIVYICHILANVY-ILTIVTNF 270


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 444,192,148
Number of Sequences: 1657284
Number of extensions: 7610595
Number of successful extensions: 17625
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 17120
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17617
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 74603367202
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)