Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP04_F_C20
         (897 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118376-1|AAM48405.1| 1041|Drosophila melanogaster RE22982p pro...    30   4.9  
AE014297-2582|AAX52966.1| 1041|Drosophila melanogaster CG14299-P...    30   4.9  
AE014297-2581|AAF55595.1| 2404|Drosophila melanogaster CG14299-P...    30   4.9  

>AY118376-1|AAM48405.1| 1041|Drosophila melanogaster RE22982p
           protein.
          Length = 1041

 Score = 29.9 bits (64), Expect = 4.9
 Identities = 19/67 (28%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
 Frame = +2

Query: 641 PDCAAFARSHISKVGTNKVRPVWAYPVEAIVEEARFAVPLQSALKTQKXGKQFAYGMEL- 817
           P   A ARSHI  + T ++R ++  P   + ++      + S L+T +    +A  ME  
Sbjct: 139 PTGFALARSHIKLLSTEELRQIYDCPELELAKQFELEFLMNSLLETSEADPLYAAVMEYY 198

Query: 818 -LKGGMT 835
            L+G +T
Sbjct: 199 ELQGKIT 205


>AE014297-2582|AAX52966.1| 1041|Drosophila melanogaster CG14299-PB,
           isoform B protein.
          Length = 1041

 Score = 29.9 bits (64), Expect = 4.9
 Identities = 19/67 (28%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
 Frame = +2

Query: 641 PDCAAFARSHISKVGTNKVRPVWAYPVEAIVEEARFAVPLQSALKTQKXGKQFAYGMEL- 817
           P   A ARSHI  + T ++R ++  P   + ++      + S L+T +    +A  ME  
Sbjct: 139 PTGFALARSHIKLLSTEELRQIYDCPELELAKQFELEFLMNSLLETSEADPLYAAVMEYY 198

Query: 818 -LKGGMT 835
            L+G +T
Sbjct: 199 ELQGKIT 205


>AE014297-2581|AAF55595.1| 2404|Drosophila melanogaster CG14299-PA,
           isoform A protein.
          Length = 2404

 Score = 29.9 bits (64), Expect = 4.9
 Identities = 19/67 (28%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
 Frame = +2

Query: 641 PDCAAFARSHISKVGTNKVRPVWAYPVEAIVEEARFAVPLQSALKTQKXGKQFAYGMEL- 817
           P   A ARSHI  + T ++R ++  P   + ++      + S L+T +    +A  ME  
Sbjct: 139 PTGFALARSHIKLLSTEELRQIYDCPELELAKQFELEFLMNSLLETSEADPLYAAVMEYY 198

Query: 818 -LKGGMT 835
            L+G +T
Sbjct: 199 ELQGKIT 205


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,440,777
Number of Sequences: 53049
Number of extensions: 621803
Number of successful extensions: 1325
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1288
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1325
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4362070239
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)