Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP04_F_C19
(883 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62249 Cluster: 40S ribosomal protein S16; n=64; Eukary... 259 6e-68
UniRef50_Q4PM67 Cluster: Ribosomal protein S16; n=5; Eukaryota|R... 249 8e-65
UniRef50_P40213 Cluster: 40S ribosomal protein S16; n=87; Eukary... 197 4e-49
UniRef50_Q7R487 Cluster: GLP_480_84573_84097; n=1; Giardia lambl... 151 2e-35
UniRef50_Q5AQG2 Cluster: Putative uncharacterized protein; n=1; ... 149 1e-34
UniRef50_Q4Q9A5 Cluster: 40S ribosomal protein S16, putative; n=... 142 1e-32
UniRef50_Q3LWA6 Cluster: Ribosomal protein S16; n=1; Bigelowiell... 137 4e-31
UniRef50_Q8SSC2 Cluster: 40S RIBOSOMAL PROTEIN S16; n=1; Encepha... 126 7e-28
UniRef50_Q4PHH7 Cluster: Putative uncharacterized protein; n=1; ... 116 6e-25
UniRef50_Q6ZWL6 Cluster: CDNA FLJ40618 fis, clone THYMU2013089, ... 111 3e-23
UniRef50_O59299 Cluster: 30S ribosomal protein S9P; n=4; Archaea... 111 3e-23
UniRef50_Q9YB48 Cluster: 30S ribosomal protein S9P; n=10; Thermo... 103 6e-21
UniRef50_A0RXP4 Cluster: 30S ribosomal protein S9P; n=2; Thermop... 87 6e-16
UniRef50_UPI0000DA28A7 Cluster: PREDICTED: similar to ribosomal ... 66 8e-10
UniRef50_Q1NYV6 Cluster: 30S ribosomal protein S9; n=1; Candidat... 64 5e-09
UniRef50_A5WDK8 Cluster: Ribosomal protein S9; n=2; Proteobacter... 60 6e-08
UniRef50_Q6F0X3 Cluster: 30S ribosomal protein S9; n=19; Bacteri... 59 2e-07
UniRef50_A6DDR0 Cluster: 30S ribosomal protein S9; n=1; Caminiba... 58 3e-07
UniRef50_Q83AX9 Cluster: 30S ribosomal protein S9; n=101; Bacter... 58 3e-07
UniRef50_O51313 Cluster: 30S ribosomal protein S9; n=87; cellula... 56 2e-06
UniRef50_Q9PKR2 Cluster: 30S ribosomal protein S9; n=3; Chlamydi... 55 3e-06
UniRef50_A6C0N9 Cluster: 30S ribosomal protein S9; n=1; Planctom... 54 6e-06
UniRef50_Q5R0K5 Cluster: 30S ribosomal protein S9; n=28; Bacteri... 53 1e-05
UniRef50_P82933 Cluster: 28S ribosomal protein S9, mitochondrial... 53 1e-05
UniRef50_Q8F0T3 Cluster: 30S ribosomal protein S9; n=8; Bacteria... 53 1e-05
UniRef50_Q11J66 Cluster: 30S ribosomal protein S9; n=11; cellula... 52 1e-05
UniRef50_A1ZN19 Cluster: 30S ribosomal protein S9; n=1; Microsci... 52 1e-05
UniRef50_P47656 Cluster: 30S ribosomal protein S9; n=5; Firmicut... 52 2e-05
UniRef50_Q982W9 Cluster: 30S ribosomal protein S9; n=190; cellul... 50 6e-05
UniRef50_Q8SXF0 Cluster: RH44312p; n=5; Diptera|Rep: RH44312p - ... 50 8e-05
UniRef50_O14006 Cluster: 40S ribosomal protein S9, mitochondrial... 50 8e-05
UniRef50_Q9X1G4 Cluster: 30S ribosomal protein S9; n=9; Bacteria... 50 8e-05
UniRef50_Q9KGD4 Cluster: 30S ribosomal protein S9; n=22; Bacteri... 50 1e-04
UniRef50_Q1UZ81 Cluster: 30S ribosomal protein S9; n=2; Candidat... 49 1e-04
UniRef50_Q3ZJ40 Cluster: Chloroplast 30S ribosomal protein S9; n... 49 1e-04
UniRef50_Q8FS19 Cluster: 30S ribosomal protein S9; n=32; Bacteri... 48 2e-04
UniRef50_Q8YPK7 Cluster: 30S ribosomal protein S9; n=26; cellula... 46 0.001
UniRef50_P38120 Cluster: 37S ribosomal protein S9, mitochondrial... 45 0.002
UniRef50_Q1IU83 Cluster: 30S ribosomal protein S9; n=22; cellula... 44 0.005
UniRef50_A1CMA0 Cluster: 37S ribosomal protein S9; n=7; Eurotiom... 44 0.005
UniRef50_Q8DMK7 Cluster: 30S ribosomal protein S9; n=6; cellular... 44 0.005
UniRef50_A3CEI4 Cluster: Putative uncharacterized protein; n=1; ... 43 0.009
UniRef50_UPI0000E7FB25 Cluster: PREDICTED: similar to mitochondr... 43 0.012
UniRef50_O67723 Cluster: 30S ribosomal protein S9; n=2; Aquifex ... 43 0.012
UniRef50_Q9ZDU0 Cluster: 30S ribosomal protein S9; n=29; Proteob... 42 0.021
UniRef50_Q7UEY4 Cluster: 30S ribosomal protein S9; n=20; Bacteri... 42 0.021
UniRef50_A2R4K9 Cluster: Contig An15c0060, complete genome; n=5;... 41 0.036
UniRef50_Q2GXL6 Cluster: Putative uncharacterized protein; n=1; ... 41 0.048
UniRef50_Q5GS63 Cluster: 30S ribosomal protein S9; n=1; Wolbachi... 40 0.063
UniRef50_A0DAX2 Cluster: Chromosome undetermined scaffold_43, wh... 40 0.063
UniRef50_Q7Q0M0 Cluster: ENSANGP00000014497; n=4; Coelomata|Rep:... 40 0.084
UniRef50_O94150 Cluster: 40S ribosomal protein S9, mitochondrial... 40 0.084
UniRef50_Q82DL8 Cluster: 30S ribosomal protein S9; n=23; cellula... 39 0.15
UniRef50_Q7S7R6 Cluster: 40S ribosomal protein S9, mitochondrial... 39 0.19
UniRef50_A5FRV9 Cluster: Ribosomal protein S9; n=5; Bacteria|Rep... 38 0.26
UniRef50_Q98Q72 Cluster: 30S ribosomal protein S9; n=66; Bacteri... 38 0.26
UniRef50_P56358 Cluster: Chloroplast 30S ribosomal protein S9; n... 38 0.45
UniRef50_Q7P3E8 Cluster: 30S ribosomal protein S9; n=1; Fusobact... 37 0.78
UniRef50_Q1JSU2 Cluster: Ribosomal protein s9, putative; n=1; To... 37 0.78
UniRef50_A5K195 Cluster: 30S ribosomal protein S9, putative; n=5... 37 0.78
UniRef50_P32060 Cluster: Chloroplast 30S ribosomal protein S9; n... 37 0.78
UniRef50_A7AM60 Cluster: Putative uncharacterized protein; n=1; ... 36 1.8
UniRef50_P03087 Cluster: Capsid protein VP1; n=1927; Polyomaviru... 36 1.8
UniRef50_Q4N5E3 Cluster: 40S ribosomal protein S9, putative; n=2... 35 2.4
UniRef50_A5K530 Cluster: 30S ribosomal protein S9, putative; n=5... 35 2.4
UniRef50_A0UPY8 Cluster: Putative uncharacterized protein precur... 35 3.2
UniRef50_O20029 Cluster: Chloroplast 30S ribosomal protein S9; n... 35 3.2
UniRef50_Q5RBV9 Cluster: Putative uncharacterized protein DKFZp4... 34 4.2
UniRef50_A7PLL5 Cluster: Chromosome chr7 scaffold_20, whole geno... 33 7.3
UniRef50_A6FKA8 Cluster: Cation/multidrug efflux pump, RND super... 33 9.6
>UniRef50_P62249 Cluster: 40S ribosomal protein S16; n=64;
Eukaryota|Rep: 40S ribosomal protein S16 - Homo sapiens
(Human)
Length = 146
Score = 259 bits (635), Expect = 6e-68
Identities = 117/144 (81%), Positives = 138/144 (95%)
Frame = +2
Query: 92 SRXPIQAVQVFGRKQTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEK 271
S+ P+Q+VQVFGRK+TATAVA+CKRG+G+++VNGRPL+++EPR LQYKL EP+LLLGKE+
Sbjct: 3 SKGPLQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKER 62
Query: 272 FSMVDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVA 451
F+ VDIRV VKGGGHVAQ+YAIRQ+ISKAL+A+YQKYVDEASKKEIKDIL+QYDR+LLVA
Sbjct: 63 FAGVDIRVRVKGGGHVAQIYAIRQSISKALVAYYQKYVDEASKKEIKDILIQYDRTLLVA 122
Query: 452 DPRRCEPKKFGGPGARARYQKSYR 523
DPRRCE KKFGGPGARARYQKSYR
Sbjct: 123 DPRRCESKKFGGPGARARYQKSYR 146
>UniRef50_Q4PM67 Cluster: Ribosomal protein S16; n=5; Eukaryota|Rep:
Ribosomal protein S16 - Ixodes scapularis (Black-legged
tick) (Deer tick)
Length = 148
Score = 249 bits (609), Expect = 8e-65
Identities = 115/145 (79%), Positives = 134/145 (92%)
Frame = +2
Query: 89 ASRXPIQAVQVFGRKQTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKE 268
A++ IQ+VQV GRK+TATAVAYCKRG+G+L+VNGRPL+ +EP L+YKL EPILLLGKE
Sbjct: 4 AAKEAIQSVQVLGRKKTATAVAYCKRGNGLLKVNGRPLENIEPLTLRYKLLEPILLLGKE 63
Query: 269 KFSMVDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLV 448
+F+ VDIR+ VKGGG+VAQ+YAIRQAISKAL+A+YQKYVDE SKKEIKD L+QYDR+LLV
Sbjct: 64 RFAGVDIRIRVKGGGNVAQIYAIRQAISKALVAYYQKYVDEQSKKEIKDTLIQYDRTLLV 123
Query: 449 ADPRRCEPKKFGGPGARARYQKSYR 523
ADPRRCEPKKFGGPGARARYQKSYR
Sbjct: 124 ADPRRCEPKKFGGPGARARYQKSYR 148
>UniRef50_P40213 Cluster: 40S ribosomal protein S16; n=87;
Eukaryota|Rep: 40S ribosomal protein S16 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 143
Score = 197 bits (480), Expect = 4e-49
Identities = 88/140 (62%), Positives = 116/140 (82%)
Frame = +2
Query: 104 IQAVQVFGRKQTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMV 283
+ +VQ FG+K++ATAVA+ K G G+++VNG P+ LVEP +L++K+ EP+LL+G +KFS +
Sbjct: 4 VPSVQTFGKKKSATAVAHVKAGKGLIKVNGSPITLVEPEILRFKVYEPLLLVGLDKFSNI 63
Query: 284 DIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRR 463
DIRV V GGGHV+QVYAIRQAI+K L+A++QKYVDE SK E+K YDR+LL+AD RR
Sbjct: 64 DIRVRVTGGGHVSQVYAIRQAIAKGLVAYHQKYVDEQSKNELKKAFTSYDRTLLIADSRR 123
Query: 464 CEPKKFGGPGARARYQKSYR 523
EPKKFGG GAR+R+QKSYR
Sbjct: 124 PEPKKFGGKGARSRFQKSYR 143
>UniRef50_Q7R487 Cluster: GLP_480_84573_84097; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_480_84573_84097 - Giardia lamblia
ATCC 50803
Length = 158
Score = 151 bits (367), Expect = 2e-35
Identities = 72/137 (52%), Positives = 99/137 (72%)
Frame = +2
Query: 113 VQVFGRKQTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMVDIR 292
V G+K+ + AVA+ K G G + VN PL LV P +L+ K+ EPI++LG+ F +D+
Sbjct: 25 VHTLGKKKNSVAVAFVKAGKGDILVNNVPLALVRPEILRTKVSEPIMILGESLFKGLDMN 84
Query: 293 VTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEP 472
+ V GGGHV+Q+YA+RQAIS+ ++A + DEA++ E++ LV YDR L+V+DPRRCE
Sbjct: 85 IKVAGGGHVSQIYAVRQAISRGVLASVK---DEAARSELRAKLVSYDRQLVVSDPRRCEA 141
Query: 473 KKFGGPGARARYQKSYR 523
KKFGG GARAR QKSYR
Sbjct: 142 KKFGGRGARARRQKSYR 158
>UniRef50_Q5AQG2 Cluster: Putative uncharacterized protein; n=1;
Emericella nidulans|Rep: Putative uncharacterized
protein - Emericella nidulans (Aspergillus nidulans)
Length = 155
Score = 149 bits (360), Expect = 1e-34
Identities = 68/94 (72%), Positives = 81/94 (86%)
Frame = +2
Query: 242 EPILLLGKEKFSMVDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDIL 421
EP+L++G +KF+ VDIRV V GGGH +QVYAIRQAI+K+L+A+YQKYVDE SK ++K
Sbjct: 62 EPVLIVGADKFAGVDIRVRVTGGGHTSQVYAIRQAIAKSLVAYYQKYVDEHSKNQLKQAF 121
Query: 422 VQYDRSLLVADPRRCEPKKFGGPGARARYQKSYR 523
VQYDR+LLVAD RR EPKKFGG GARARYQKSYR
Sbjct: 122 VQYDRTLLVADNRRAEPKKFGGRGARARYQKSYR 155
>UniRef50_Q4Q9A5 Cluster: 40S ribosomal protein S16, putative; n=7;
Trypanosomatidae|Rep: 40S ribosomal protein S16,
putative - Leishmania major
Length = 149
Score = 142 bits (343), Expect = 1e-32
Identities = 71/141 (50%), Positives = 95/141 (67%), Gaps = 1/141 (0%)
Frame = +2
Query: 104 IQAVQVFGRKQTATAVA-YCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSM 280
++ VQ FG+K+TA AVA K ++VNG PL + P L+ K+ E I ++G + +S
Sbjct: 9 LKQVQTFGKKKTAIAVATVTKAAQCNIKVNGVPLQQILPDTLRAKIMEAITVVGSKYYSR 68
Query: 281 VDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPR 460
+ I V V GGG V+Q YA RQAI+K LIAF+QKY +E K +KD + YD+ LL+ADPR
Sbjct: 69 LRIDVAVHGGGQVSQAYAARQAIAKGLIAFFQKYHNEVEKAALKDKFLAYDKFLLIADPR 128
Query: 461 RCEPKKFGGPGARARYQKSYR 523
RCEPKK+G AR R+ KSYR
Sbjct: 129 RCEPKKWGRHSARTRFTKSYR 149
>UniRef50_Q3LWA6 Cluster: Ribosomal protein S16; n=1; Bigelowiella
natans|Rep: Ribosomal protein S16 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 139
Score = 137 bits (331), Expect = 4e-31
Identities = 61/137 (44%), Positives = 93/137 (67%)
Frame = +2
Query: 113 VQVFGRKQTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMVDIR 292
+Q FG+K+ A A+ K+G G +++NG P++LV P ++ K+ EP +LG + ++
Sbjct: 3 IQCFGKKKNAIAITTAKKGSGKIKINGVPINLVHPLDIKNKILEPFFILGSNERLNLNFD 62
Query: 293 VTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEP 472
+ KGGG V+Q+YAIRQ+ISK L+ +Y KY+ + +K + YD+ LL++D R EP
Sbjct: 63 IFSKGGGKVSQIYAIRQSISKCLVFYYYKYISASKSNLLKIKYLTYDKKLLISDVSRIEP 122
Query: 473 KKFGGPGARARYQKSYR 523
KK+GG GARAR+QKSYR
Sbjct: 123 KKYGGLGARARFQKSYR 139
>UniRef50_Q8SSC2 Cluster: 40S RIBOSOMAL PROTEIN S16; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S16
- Encephalitozoon cuniculi
Length = 145
Score = 126 bits (304), Expect = 7e-28
Identities = 64/141 (45%), Positives = 91/141 (64%), Gaps = 1/141 (0%)
Frame = +2
Query: 104 IQAVQVFGRKQTATAVAYCKR-GHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSM 280
+++V G+K+ A A C + G +R+N P L+ L+ KL+E I ++ +
Sbjct: 5 VKSVTTQGKKKRAVATCVCTQTGEFSIRINKVPFKLITNTLMIAKLKEIICIVEQANIKD 64
Query: 281 VDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPR 460
+ +T K GG V++VYA+R A +KA++AFY Y DE K+EI+ L+ +DR LVAD R
Sbjct: 65 LSFDITCKIGGDVSRVYAVRMAFAKAILAFYGTYFDEWKKQEIQKRLLDFDRFSLVADSR 124
Query: 461 RCEPKKFGGPGARARYQKSYR 523
+ EPKKFGGPGARARYQKSYR
Sbjct: 125 KREPKKFGGPGARARYQKSYR 145
>UniRef50_Q4PHH7 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 199
Score = 116 bits (280), Expect = 6e-25
Identities = 54/83 (65%), Positives = 66/83 (79%)
Frame = +2
Query: 275 SMVDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVAD 454
S VDIR+ V GGG +Q+YAIRQAI+K+L+A+Y KY D AS E++ + V YDR+LL+AD
Sbjct: 117 STVDIRLRVSGGGATSQIYAIRQAIAKSLVAYYAKYYDAASALELRQLFVAYDRTLLIAD 176
Query: 455 PRRCEPKKFGGPGARARYQKSYR 523
RR EPKKFGG GARAR QKSYR
Sbjct: 177 TRRSEPKKFGGHGARARRQKSYR 199
Score = 77.8 bits (183), Expect = 3e-13
Identities = 30/56 (53%), Positives = 49/56 (87%)
Frame = +2
Query: 110 AVQVFGRKQTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFS 277
+V FG+K+TATAVA+CK G G++R+NG+P+ LV+P +L++K+ EP+L++G++KFS
Sbjct: 5 SVSCFGKKKTATAVAHCKEGKGLIRLNGQPISLVQPEILRWKVFEPVLVVGEDKFS 60
>UniRef50_Q6ZWL6 Cluster: CDNA FLJ40618 fis, clone THYMU2013089,
moderately similar to 40S RIBOSOMAL PROTEIN S16; n=2;
Homo sapiens|Rep: CDNA FLJ40618 fis, clone THYMU2013089,
moderately similar to 40S RIBOSOMAL PROTEIN S16 - Homo
sapiens (Human)
Length = 178
Score = 111 bits (266), Expect = 3e-23
Identities = 57/108 (52%), Positives = 75/108 (69%)
Frame = +2
Query: 104 IQAVQVFGRKQTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMV 283
+Q+VQ+F K+ A AV C+ G G +R+N PL+++ LQYKL E LLL KE+ + +
Sbjct: 18 LQSVQIFTYKEMAIAVVLCRCGSGFIRMNEGPLEMIRLLTLQYKLLELGLLLDKEQLAGM 77
Query: 284 DIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQ 427
DI V VKG GHV Q+YA+ Q ISKAL+ Y KYVDEAS +EIKD L +
Sbjct: 78 DIHVRVKGSGHVVQIYAVLQYISKALVPCYPKYVDEAS-EEIKDTLTR 124
>UniRef50_O59299 Cluster: 30S ribosomal protein S9P; n=4;
Archaea|Rep: 30S ribosomal protein S9P - Pyrococcus
horikoshii
Length = 135
Score = 111 bits (266), Expect = 3e-23
Identities = 56/142 (39%), Positives = 91/142 (64%), Gaps = 2/142 (1%)
Frame = +2
Query: 104 IQAVQVFGRKQTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMV 283
++ +Q G+++TA A A + G G +R+NG+P++++EP + ++ + EP++L G+E ++ V
Sbjct: 1 MRIIQTTGKRKTAIARAVIREGRGRVRINGKPVEIIEPEIARFTILEPLILAGEEIWNSV 60
Query: 284 DIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRR 463
DI V V+GGG + Q A R AI++AL V+ +K+ ++YDR++LV DPRR
Sbjct: 61 DIDVKVQGGGFMGQAEAARIAIARAL-------VEWTGDMNLKEKFIKYDRTMLVGDPRR 113
Query: 464 CEPKK--FGGPGARARYQKSYR 523
EP K G RA+ QKSYR
Sbjct: 114 TEPHKPNRSTKGPRAKRQKSYR 135
>UniRef50_Q9YB48 Cluster: 30S ribosomal protein S9P; n=10;
Thermoprotei|Rep: 30S ribosomal protein S9P - Aeropyrum
pernix
Length = 151
Score = 103 bits (247), Expect = 6e-21
Identities = 53/142 (37%), Positives = 91/142 (64%), Gaps = 9/142 (6%)
Frame = +2
Query: 125 GRKQTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMVDIRVTVK 304
G+++ A A A + G G + +NG PL++ + + K+ EP+L+ G+ S+VDIRV V+
Sbjct: 11 GKRKRAIARAVIRPGRGRVWINGVPLEIYPIEMARIKMMEPLLIAGEGVRSLVDIRVRVE 70
Query: 305 GGGHVAQVYAIRQAISKALIAFYQ---------KYVDEASKKEIKDILVQYDRSLLVADP 457
GGG + Q A+R AI++ L+ F++ + +D+ S ++++ +++DR++LV DP
Sbjct: 71 GGGVMGQADAVRMAIARGLVEFFRCEESDDELCRMMDKIS-RDLRTAFLEHDRTMLVGDP 129
Query: 458 RRCEPKKFGGPGARARYQKSYR 523
RR EP+K+ AR R+QKSYR
Sbjct: 130 RRTEPEKYMRYSARRRWQKSYR 151
>UniRef50_A0RXP4 Cluster: 30S ribosomal protein S9P; n=2;
Thermoprotei|Rep: 30S ribosomal protein S9P -
Cenarchaeum symbiosum
Length = 149
Score = 87.0 bits (206), Expect = 6e-16
Identities = 49/141 (34%), Positives = 79/141 (56%), Gaps = 7/141 (4%)
Frame = +2
Query: 122 FGRKQTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMVDIRVTV 301
F ++ A+A Y +G G +R+N P +++ + + P+ + G + VDI V V
Sbjct: 10 FATRKAASAHVYIIKGTGRVRINNVPAEMIVHESAREAILAPLDIAGDAR-KKVDISVRV 68
Query: 302 KGGGHVAQVYAIRQAISKALIAFYQKY-------VDEASKKEIKDILVQYDRSLLVADPR 460
KGGG + Q A IS+ALI + + + + ++++++ + +D+ L+ D R
Sbjct: 69 KGGGFMGQAGASATGISRALIGWTKSRREPRNHPLTKTAREDLRKRIGDFDKYLISGDAR 128
Query: 461 RCEPKKFGGPGARARYQKSYR 523
R EPKKFGGPGAR R QKSYR
Sbjct: 129 RKEPKKFGGPGARRRKQKSYR 149
>UniRef50_UPI0000DA28A7 Cluster: PREDICTED: similar to ribosomal
protein S16; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to ribosomal protein S16 - Rattus norvegicus
Length = 102
Score = 66.5 bits (155), Expect = 8e-10
Identities = 38/83 (45%), Positives = 54/83 (65%), Gaps = 1/83 (1%)
Frame = +2
Query: 92 SRXPIQAVQVFGRKQTATAVAYCKRGHGMLRVNG-RPLDLVEPRLLQYKLQEPILLLGKE 268
S+ P+Q+ QVFG K+ A +A +G +++V L++ EP QY+L +PIL LGKE
Sbjct: 22 SKGPLQSKQVFGCKKKA--IAMHAKGKWLIKVTDVHLLEMTEPVKQQYQLLDPILPLGKE 79
Query: 269 KFSMVDIRVTVKGGGHVAQVYAI 337
+F+ V I V V G G VAQ+YAI
Sbjct: 80 RFARVGIWVRVNGVGRVAQIYAI 102
>UniRef50_Q1NYV6 Cluster: 30S ribosomal protein S9; n=1; Candidatus
Sulcia muelleri str. Hc (Homalodisca coagulata)|Rep: 30S
ribosomal protein S9 - Candidatus Sulcia muelleri str.
Hc (Homalodisca coagulata)
Length = 132
Score = 64.1 bits (149), Expect = 5e-09
Identities = 50/139 (35%), Positives = 71/139 (51%), Gaps = 2/139 (1%)
Frame = +2
Query: 113 VQVFGRKQTATAVAYCKRGHGMLRVNGRPL-DLVEPRLLQYKLQEPILL-LGKEKFSMVD 286
+ GR++TA A Y K G G+++VN P + LL K+ +P+LL + KF D
Sbjct: 8 IHTIGRRKTAVARMYMKIGSGLIKVNNIPYKNYFNNNLLFNKISKPLLLTYNQNKF---D 64
Query: 287 IRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRC 466
+ V GGG +Q AI AIS+AL F D K +K +++LL DPR
Sbjct: 65 FYIKVSGGGINSQAEAISLAISRALCKF-----DINHKPILK------EQNLLTRDPRMV 113
Query: 467 EPKKFGGPGARARYQKSYR 523
E KK+G +R +Q S R
Sbjct: 114 ERKKYGKKKSRKNFQFSKR 132
>UniRef50_A5WDK8 Cluster: Ribosomal protein S9; n=2;
Proteobacteria|Rep: Ribosomal protein S9 - Psychrobacter
sp. PRwf-1
Length = 128
Score = 60.5 bits (140), Expect = 6e-08
Identities = 49/134 (36%), Positives = 68/134 (50%), Gaps = 1/134 (0%)
Frame = +2
Query: 125 GRKQTATAVAYCKRGHGMLRVNGRPLDLVEPR-LLQYKLQEPILLLGKEKFSMVDIRVTV 301
GR++T+TA + +G G + VNG+PLD R + +++P+ LL + DI TV
Sbjct: 8 GRRKTSTARVFLSKGTGNIVVNGKPLDEYFGRETSRMVVRQPLELL--DSAETYDIYATV 65
Query: 302 KGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKF 481
KGGG Q AIR I++ALI DE K +K + + D R+ E KK
Sbjct: 66 KGGGINGQAGAIRHGITRALIE-----SDETLKPALK------EAGFVTRDSRQVERKKL 114
Query: 482 GGPGARARYQKSYR 523
G AR R Q S R
Sbjct: 115 GLRKARKRPQFSKR 128
>UniRef50_Q6F0X3 Cluster: 30S ribosomal protein S9; n=19;
Bacteria|Rep: 30S ribosomal protein S9 - Mesoplasma
florum (Acholeplasma florum)
Length = 131
Score = 58.8 bits (136), Expect = 2e-07
Identities = 48/134 (35%), Positives = 66/134 (49%), Gaps = 1/134 (0%)
Frame = +2
Query: 125 GRKQTATAVAYCKRGHGMLRVNGRP-LDLVEPRLLQYKLQEPILLLGKEKFSMVDIRVTV 301
GR++T+ A G G + VNG P L+ L L++P++ G EK DI VTV
Sbjct: 11 GRRKTSVAQVILTPGKGNIIVNGVPALEFFPYPTLVQDLEQPLVATGTEKD--FDITVTV 68
Query: 302 KGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKF 481
KGGG Q A R I++AL+ + Y +K ++ + LL D R E KK+
Sbjct: 69 KGGGFTGQAGATRLGIARALLVASEDY-----RKGLRAV------GLLTRDARIKERKKY 117
Query: 482 GGPGARARYQKSYR 523
G GAR Q S R
Sbjct: 118 GLRGARRAPQYSKR 131
>UniRef50_A6DDR0 Cluster: 30S ribosomal protein S9; n=1;
Caminibacter mediatlanticus TB-2|Rep: 30S ribosomal
protein S9 - Caminibacter mediatlanticus TB-2
Length = 144
Score = 58.0 bits (134), Expect = 3e-07
Identities = 33/88 (37%), Positives = 52/88 (59%), Gaps = 2/88 (2%)
Frame = +2
Query: 125 GRKQTATAVAYCKRGHGMLRVNGRPLD--LVEPRLLQYKLQEPILLLGKEKFSMVDIRVT 298
G+++ A A + K G G + VNG+PLD L L+ +++ P++L+ +E DI V
Sbjct: 11 GKRKEAVAKVWLKNGSGNITVNGKPLDEFLGGREALKLRVRWPLMLVKQE--GNFDIEVK 68
Query: 299 VKGGGHVAQVYAIRQAISKALIAFYQKY 382
V GGG AQ AI+ ISKAL+ + ++
Sbjct: 69 VLGGGFAAQADAIKHGISKALVEYAPEF 96
>UniRef50_Q83AX9 Cluster: 30S ribosomal protein S9; n=101;
Bacteria|Rep: 30S ribosomal protein S9 - Coxiella
burnetii
Length = 139
Score = 58.0 bits (134), Expect = 3e-07
Identities = 44/134 (32%), Positives = 69/134 (51%), Gaps = 1/134 (0%)
Frame = +2
Query: 125 GRKQTATAVAYCKRGHGMLRVNGRPLDLVEPR-LLQYKLQEPILLLGKEKFSMVDIRVTV 301
GR++T++A + + G G + +NG PLD R + +++P++ L + S D+ TV
Sbjct: 13 GRRKTSSARVFLRSGTGQIIINGLPLDEYFGRETARMVVRQPLVKLDVQ--SRFDVYATV 70
Query: 302 KGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKF 481
+GGG Q AIR I++ALI +Y +E + ++ + DPR E KK
Sbjct: 71 QGGGDSGQAGAIRHGITRALI----QYDEEGGEGGTWRSTLR-KAGFVTRDPRMVERKKV 125
Query: 482 GGPGARARYQKSYR 523
G GAR Q S R
Sbjct: 126 GLHGARRGTQFSKR 139
>UniRef50_O51313 Cluster: 30S ribosomal protein S9; n=87; cellular
organisms|Rep: 30S ribosomal protein S9 - Borrelia
burgdorferi (Lyme disease spirochete)
Length = 136
Score = 55.6 bits (128), Expect = 2e-06
Identities = 42/134 (31%), Positives = 64/134 (47%), Gaps = 1/134 (0%)
Frame = +2
Query: 125 GRKQTATAVAYCKRGHGMLRVNGRPLD-LVEPRLLQYKLQEPILLLGKEKFSMVDIRVTV 301
GR++++ A Y + G G ++VN R D ++ L+ P++L D+ + V
Sbjct: 16 GRRKSSVARVYIREGSGNIKVNNRDFDSYIQLENLRTMALSPLVL--TNTLGKYDLYINV 73
Query: 302 KGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKF 481
GGG Q AIR IS+AL +DE++K ++ L D R+ E KKF
Sbjct: 74 YGGGISGQSGAIRHGISRALFK-----LDESNK------MILRSNGFLTRDSRKVERKKF 122
Query: 482 GGPGARARYQKSYR 523
G AR +Q S R
Sbjct: 123 GQKKARKSFQFSKR 136
>UniRef50_Q9PKR2 Cluster: 30S ribosomal protein S9; n=3;
Chlamydia|Rep: 30S ribosomal protein S9 - Chlamydia
muridarum
Length = 133
Score = 54.8 bits (126), Expect = 3e-06
Identities = 44/145 (30%), Positives = 73/145 (50%), Gaps = 1/145 (0%)
Frame = +2
Query: 92 SRXPIQAVQVFGRKQTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYK-LQEPILLLGKE 268
++ IQ GR++ A + + G+G + VNG+ L+ P +Q + P+ +LG
Sbjct: 2 TKNTIQESVATGRRKQAVSSVRLRSGNGKIDVNGKTLEQYFPLEVQRATILAPLKMLGD- 60
Query: 269 KFSMVDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLV 448
+ D+ + V GGG QV A R +++A++ +K E K+E+K + L
Sbjct: 61 -VNSFDLIIRVSGGGVQGQVIATRLGLARAVLQ--EK---EDMKQELKS------QGFLT 108
Query: 449 ADPRRCEPKKFGGPGARARYQKSYR 523
DPR+ E KK+G AR +Q S R
Sbjct: 109 RDPRKKERKKYGRKKARKSFQFSKR 133
>UniRef50_A6C0N9 Cluster: 30S ribosomal protein S9; n=1;
Planctomyces maris DSM 8797|Rep: 30S ribosomal protein
S9 - Planctomyces maris DSM 8797
Length = 201
Score = 53.6 bits (123), Expect = 6e-06
Identities = 45/134 (33%), Positives = 61/134 (45%), Gaps = 1/134 (0%)
Frame = +2
Query: 125 GRKQTATAVAYCKRGHGMLRVNGRPL-DLVEPRLLQYKLQEPILLLGKEKFSMVDIRVTV 301
GR++TA A K G G L +NG+ L D + + ++ P L E F VD+ V V
Sbjct: 81 GRRKTAVARVRIKAGSGSLTINGQSLNDYLRVERDRQMVEAP--LKATETFGKVDVWVRV 138
Query: 302 KGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKF 481
GGG Q AI I++AL A+ ++ + S L D R E KKF
Sbjct: 139 TGGGTTGQTGAIVLGIARALEAYNNQFHETLSAGR-----------FLTRDSRMVERKKF 187
Query: 482 GGPGARARYQKSYR 523
G AR +Q S R
Sbjct: 188 GFKKARKSFQFSKR 201
>UniRef50_Q5R0K5 Cluster: 30S ribosomal protein S9; n=28;
Bacteria|Rep: 30S ribosomal protein S9 - Idiomarina
loihiensis
Length = 130
Score = 52.8 bits (121), Expect = 1e-05
Identities = 44/135 (32%), Positives = 69/135 (51%), Gaps = 2/135 (1%)
Frame = +2
Query: 125 GRKQTATAVAYCKRGHGMLRVNGRPLDLVEPR-LLQYKLQEPILLLGK-EKFSMVDIRVT 298
GR++ +TA + + G G +++N R L+ R Q +++P+ L+ EKF D+ +T
Sbjct: 10 GRRKNSTARVFLRPGSGNIKINNRELNEYFGRETAQMVVRQPLELVEMTEKF---DMYIT 66
Query: 299 VKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKK 478
V GGG Q AIR I++AL+ + DEA + ++ + D R+ E KK
Sbjct: 67 VSGGGTTGQAGAIRHGITRALMQY-----DEALRGPLR------KEGYVTRDARQVERKK 115
Query: 479 FGGPGARARYQKSYR 523
G AR R Q S R
Sbjct: 116 IGLHKARKRPQFSKR 130
>UniRef50_P82933 Cluster: 28S ribosomal protein S9, mitochondrial
precursor; n=29; Euteleostomi|Rep: 28S ribosomal protein
S9, mitochondrial precursor - Homo sapiens (Human)
Length = 396
Score = 52.8 bits (121), Expect = 1e-05
Identities = 45/129 (34%), Positives = 61/129 (47%), Gaps = 1/129 (0%)
Frame = +2
Query: 125 GRKQTATAVAYC-KRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMVDIRVTV 301
G+++TA A A K G G ++VNG L P + Q + Q ++ D+ TV
Sbjct: 274 GKRKTAKAEAIVYKHGSGRIKVNGIDYQLYFP-ITQDREQLMFPFHFVDRLGKHDVTCTV 332
Query: 302 KGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKF 481
GGG AQ AIR A++KAL +F + DE LL DPR E KK
Sbjct: 333 SGGGRSAQAGAIRLAMAKALCSFVTE--DEVEWMR--------QAGLLTTDPRVRERKKP 382
Query: 482 GGPGARARY 508
G GAR ++
Sbjct: 383 GQEGARRKF 391
>UniRef50_Q8F0T3 Cluster: 30S ribosomal protein S9; n=8;
Bacteria|Rep: 30S ribosomal protein S9 - Leptospira
interrogans
Length = 139
Score = 52.8 bits (121), Expect = 1e-05
Identities = 45/144 (31%), Positives = 72/144 (50%), Gaps = 3/144 (2%)
Frame = +2
Query: 101 PIQAVQVFGRKQTATAVAYCKRGHGMLRVNGRPL-DLVEPR--LLQYKLQEPILLLGKEK 271
P + + GR++T+ A A K G G + VN + + D ++ R +++ ++ LL ++K
Sbjct: 10 PAKEIWAVGRRKTSVARAKIKEGSGKITVNHKDIKDYLQNRKAIIEEAIRPLSLLNVQDK 69
Query: 272 FSMVDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVA 451
+ D+ + V GGG QV AIR A+++A+ ++ A KKE L
Sbjct: 70 Y---DLNLNVTGGGTTGQVGAIRHALARAICRIKPEF-RPAVKKE----------GFLTR 115
Query: 452 DPRRCEPKKFGGPGARARYQKSYR 523
DPR E KK+G AR Q S R
Sbjct: 116 DPRMVERKKYGLHKARRGTQFSKR 139
>UniRef50_Q11J66 Cluster: 30S ribosomal protein S9; n=11; cellular
organisms|Rep: 30S ribosomal protein S9 - Mesorhizobium
sp. (strain BNC1)
Length = 160
Score = 52.4 bits (120), Expect = 1e-05
Identities = 45/134 (33%), Positives = 61/134 (45%), Gaps = 1/134 (0%)
Frame = +2
Query: 125 GRKQTATAVAYCKRGHGMLRVNGRPLDLVEPR-LLQYKLQEPILLLGKEKFSMVDIRVTV 301
G+++ A A + K G G + VN + R +LQ LQ+PI+ + DI TV
Sbjct: 40 GKRKNAIARVWVKPGSGKILVNDKEFTQYFARPVLQMILQQPIVATNRN--GQYDIVATV 97
Query: 302 KGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKF 481
GGG Q A+R IS+AL FY+ + KK L D R E KK+
Sbjct: 98 VGGGLSGQAGAVRHGISRAL-TFYEPELRAVLKK----------GGFLTRDSRVVERKKY 146
Query: 482 GGPGARARYQKSYR 523
G AR +Q S R
Sbjct: 147 GRAKARRSFQFSKR 160
>UniRef50_A1ZN19 Cluster: 30S ribosomal protein S9; n=1; Microscilla
marina ATCC 23134|Rep: 30S ribosomal protein S9 -
Microscilla marina ATCC 23134
Length = 172
Score = 52.4 bits (120), Expect = 1e-05
Identities = 32/88 (36%), Positives = 49/88 (55%), Gaps = 2/88 (2%)
Frame = +2
Query: 104 IQAVQVFGRKQTATAVAYCKRGHGMLRVNGRPLDLVEPR-LLQYKLQEPILLL-GKEKFS 277
++ + GR++T+ A Y + G G + VN R P +LQ +++PI+ + EKF
Sbjct: 7 VKIINTIGRRKTSIARVYLQEGSGQITVNKRDFAEYFPTDVLQTIVKQPIVAVDANEKF- 65
Query: 278 MVDIRVTVKGGGHVAQVYAIRQAISKAL 361
DIR V GGG Q A+R AI++AL
Sbjct: 66 --DIRANVTGGGVAGQAEALRHAIARAL 91
>UniRef50_P47656 Cluster: 30S ribosomal protein S9; n=5;
Firmicutes|Rep: 30S ribosomal protein S9 - Mycoplasma
genitalium
Length = 132
Score = 52.0 bits (119), Expect = 2e-05
Identities = 47/137 (34%), Positives = 67/137 (48%), Gaps = 4/137 (2%)
Frame = +2
Query: 125 GRKQTATAVAYC--KRGHGMLRVNGR-PLDLVEPRLLQYKLQEPILLLG-KEKFSMVDIR 292
GR++++TA Y + G + +N R P D +L+ +++P+ L K+ F DI
Sbjct: 10 GRRKSSTAKVYLYQSKDKGKITINHRNPSDYFPNKLVIQDMEQPLELTKLKDNF---DIN 66
Query: 293 VTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEP 472
V VKGGG Q AIR I +ALI F ++K +L + L D R E
Sbjct: 67 VVVKGGGFTGQAGAIRLGIVRALIKF---------NPDLKKLL--KTKKLTTRDKRAKER 115
Query: 473 KKFGGPGARARYQKSYR 523
KKFG GAR Q + R
Sbjct: 116 KKFGLYGARRAPQFTKR 132
>UniRef50_Q982W9 Cluster: 30S ribosomal protein S9; n=190; cellular
organisms|Rep: 30S ribosomal protein S9 - Rhizobium loti
(Mesorhizobium loti)
Length = 160
Score = 50.4 bits (115), Expect = 6e-05
Identities = 44/134 (32%), Positives = 60/134 (44%), Gaps = 1/134 (0%)
Frame = +2
Query: 125 GRKQTATAVAYCKRGHGMLRVNGRPLDLVEPR-LLQYKLQEPILLLGKEKFSMVDIRVTV 301
G+++ A A + K G G + VN + R +LQ L +PI+ + DI TV
Sbjct: 40 GKRKNAIARVWVKPGSGKIVVNDKEFATYFARPVLQMILNQPII--ASNRSGQYDIVATV 97
Query: 302 KGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKF 481
GGG Q A+R ISKAL +Y+ + KK L D R E KK+
Sbjct: 98 VGGGLSGQAGAVRHGISKAL-TYYEPALRAVLKK----------GGFLTRDSRVVERKKY 146
Query: 482 GGPGARARYQKSYR 523
G AR +Q S R
Sbjct: 147 GKAKARRSFQFSKR 160
>UniRef50_Q8SXF0 Cluster: RH44312p; n=5; Diptera|Rep: RH44312p -
Drosophila melanogaster (Fruit fly)
Length = 395
Score = 50.0 bits (114), Expect = 8e-05
Identities = 39/127 (30%), Positives = 56/127 (44%)
Frame = +2
Query: 128 RKQTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMVDIRVTVKG 307
RK V G G + +NG+ + E + +L P+ E VD+ V+G
Sbjct: 276 RKTARADVTVRLPGTGKISINGKDISYFEDENCREQLLFPLQF--SELLGKVDVEANVEG 333
Query: 308 GGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKFGG 487
GG Q AIR I+ +L +F + + E+ + LL D RR E KKFG
Sbjct: 334 GGPSGQAGAIRWGIAMSLRSFVDQEMIESMRL----------AGLLTRDYRRRERKKFGQ 383
Query: 488 PGARARY 508
GAR +Y
Sbjct: 384 EGARRKY 390
>UniRef50_O14006 Cluster: 40S ribosomal protein S9, mitochondrial
precursor; n=1; Schizosaccharomyces pombe|Rep: 40S
ribosomal protein S9, mitochondrial precursor -
Schizosaccharomyces pombe (Fission yeast)
Length = 132
Score = 50.0 bits (114), Expect = 8e-05
Identities = 40/128 (31%), Positives = 60/128 (46%)
Frame = +2
Query: 125 GRKQTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMVDIRVTVK 304
G+++++ A G G VNG P D+ R++ K L + + ++ TV
Sbjct: 12 GKRKSSKATVKMLPGTGKFYVNGSPFDVYFQRMVHRK-HAVYPLAACNRLTNYNVWATVH 70
Query: 305 GGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKFG 484
GGG Q A+ AISK+LI + E S K+ V D ++ D R+ E KK G
Sbjct: 71 GGGPTGQSGAVHAAISKSLI------LQEPSLKQ-----VIKDTHCVLNDKRKVERKKTG 119
Query: 485 GPGARARY 508
P AR +Y
Sbjct: 120 QPKARKKY 127
>UniRef50_Q9X1G4 Cluster: 30S ribosomal protein S9; n=9;
Bacteria|Rep: 30S ribosomal protein S9 - Thermotoga
maritima
Length = 134
Score = 50.0 bits (114), Expect = 8e-05
Identities = 41/138 (29%), Positives = 67/138 (48%), Gaps = 5/138 (3%)
Frame = +2
Query: 125 GRKQTATAVAYCKRGHGMLRVNGRPLDLV-----EPRLLQYKLQEPILLLGKEKFSMVDI 289
GR++TA A Y + G G ++VNG+ + + P ++ + EP+ + D+
Sbjct: 11 GRRKTAVARVYLRPGEGKVKVNGKEYESLNDYFKNPAWTKHAI-EPLEV--TNTLGKFDL 67
Query: 290 RVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCE 469
+ V GGG Q A+R I++AL+ + Q ++ +L +Y +L DPR E
Sbjct: 68 VIRVNGGGLSGQSGAVRLGIARALLQYDQ---------NLRPVLKKY--KMLTRDPREVE 116
Query: 470 PKKFGGPGARARYQKSYR 523
KK+G AR Q S R
Sbjct: 117 RKKYGLKKARRAPQFSKR 134
>UniRef50_Q9KGD4 Cluster: 30S ribosomal protein S9; n=22;
Bacteria|Rep: 30S ribosomal protein S9 - Bacillus
halodurans
Length = 130
Score = 49.6 bits (113), Expect = 1e-04
Identities = 43/134 (32%), Positives = 61/134 (45%), Gaps = 1/134 (0%)
Frame = +2
Query: 125 GRKQTATAVAYCKRGHGMLRVNGRPLD-LVEPRLLQYKLQEPILLLGKEKFSMVDIRVTV 301
GR++ + A G G + +NGR LD L+ +++P++ G E D+RV V
Sbjct: 10 GRRKHSVARVRLVPGDGNIVINGRSLDEYFGLETLKLIVKQPLVETGTE--GQYDVRVNV 67
Query: 302 KGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKF 481
GGG Q AIR I++AL+ VD + +K L D R E KK+
Sbjct: 68 DGGGFTGQAGAIRHGIARALL-----QVDPEYRPSLK------SAGFLTRDARMKERKKY 116
Query: 482 GGPGARARYQKSYR 523
G AR Q S R
Sbjct: 117 GLKAARRAPQFSKR 130
>UniRef50_Q1UZ81 Cluster: 30S ribosomal protein S9; n=2; Candidatus
Pelagibacter ubique|Rep: 30S ribosomal protein S9 -
Candidatus Pelagibacter ubique HTCC1002
Length = 149
Score = 49.2 bits (112), Expect = 1e-04
Identities = 41/134 (30%), Positives = 63/134 (47%), Gaps = 1/134 (0%)
Frame = +2
Query: 125 GRKQTATAVAYCKRGHGMLRVNGRPLD-LVEPRLLQYKLQEPILLLGKEKFSMVDIRVTV 301
GR++ + A + K+G G + VNGR +D + ++ P ++ + + D+R +V
Sbjct: 29 GRRKKSIAKIWVKKGTGKIYVNGRTMDEYFTSGSHKMQITRPFEIINQA--TDYDVRCSV 86
Query: 302 KGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKF 481
GGGH Q A+ I+KALI F D ++ +K L D R E KK
Sbjct: 87 AGGGHTGQAGAMVHGIAKALILF-----DSENRAVLK------TEKLNTRDSRSVERKKP 135
Query: 482 GGPGARARYQKSYR 523
G AR +Q S R
Sbjct: 136 GRRKARRSFQFSKR 149
>UniRef50_Q3ZJ40 Cluster: Chloroplast 30S ribosomal protein S9; n=2;
Eukaryota|Rep: Chloroplast 30S ribosomal protein S9 -
Pseudendoclonium akinetum (Green alga)
Length = 141
Score = 49.2 bits (112), Expect = 1e-04
Identities = 44/136 (32%), Positives = 67/136 (49%), Gaps = 3/136 (2%)
Frame = +2
Query: 125 GRKQTATAVAYCKRGHGMLRVNG-RPLDLVEPRL-LQYKLQEPILLLG-KEKFSMVDIRV 295
GR++T+ A G+G +NG ++ ++ + L + +QEP+ L K +F+++ +
Sbjct: 20 GRRKTSIATVQLFPGNGEFTINGISGIEYMQQKEELIFAIQEPLHFLKLKNEFNLI---I 76
Query: 296 TVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPK 475
VKGGG V QV AI+ I++AL F Y + K L DPR E K
Sbjct: 77 KVKGGGLVGQVNAIKLGIARALCEFDLTYRNSLKLK-----------GFLTRDPRCKERK 125
Query: 476 KFGGPGARARYQKSYR 523
K+G AR Q S R
Sbjct: 126 KYGLKKARKAPQFSKR 141
>UniRef50_Q8FS19 Cluster: 30S ribosomal protein S9; n=32;
Bacteria|Rep: 30S ribosomal protein S9 - Corynebacterium
efficiens
Length = 182
Score = 48.4 bits (110), Expect = 2e-04
Identities = 44/134 (32%), Positives = 60/134 (44%), Gaps = 1/134 (0%)
Frame = +2
Query: 125 GRKQTATAVAYCKRGHGMLRVNGRPL-DLVEPRLLQYKLQEPILLLGKEKFSMVDIRVTV 301
GR++ A G G + NGR L D +L Q ++ P++LLG+E DI +
Sbjct: 62 GRRKRAIVRVRMVAGSGEITCNGRTLEDYFPNKLHQQLIKAPLVLLGRE--GQFDIHANL 119
Query: 302 KGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKF 481
GGG Q A R AI++AL A+ + A + +K L D R E KK
Sbjct: 120 GGGGPTGQAGAFRLAIARALNAY-----NPAERPTLK------KAGFLTRDARAVERKKA 168
Query: 482 GGPGARARYQKSYR 523
G AR Q S R
Sbjct: 169 GLHKARRAPQYSKR 182
>UniRef50_Q8YPK7 Cluster: 30S ribosomal protein S9; n=26; cellular
organisms|Rep: 30S ribosomal protein S9 - Anabaena sp.
(strain PCC 7120)
Length = 138
Score = 46.0 bits (104), Expect = 0.001
Identities = 43/135 (31%), Positives = 62/135 (45%), Gaps = 2/135 (1%)
Frame = +2
Query: 125 GRKQTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQY--KLQEPILLLGKEKFSMVDIRVT 298
GR+++A A G G L VNG+P DL Y ++ P+ LG E + DI V
Sbjct: 17 GRRKSAVARVRLVPGTGQLIVNGKPGDLYFQFNANYLGVIKAPLETLGLE--NEYDILVK 74
Query: 299 VKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKK 478
+GGG Q ++R +++AL +D ++ +K L DPR E KK
Sbjct: 75 AEGGGLTGQADSVRLGVARALC-----QLDPENRPPLK------TEGYLTRDPRAKERKK 123
Query: 479 FGGPGARARYQKSYR 523
+G AR Q S R
Sbjct: 124 YGLHKARKAPQYSKR 138
>UniRef50_P38120 Cluster: 37S ribosomal protein S9, mitochondrial
precursor; n=7; Saccharomycetales|Rep: 37S ribosomal
protein S9, mitochondrial precursor - Saccharomyces
cerevisiae (Baker's yeast)
Length = 278
Score = 45.2 bits (102), Expect = 0.002
Identities = 30/84 (35%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
Frame = +2
Query: 125 GRKQTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPIL--LLGKEKFSMVDIRVT 298
G+++++TA + RG G + VNGR L+ L+ K +E I+ L E +I T
Sbjct: 158 GKRKSSTAKVFVVRGTGEILVNGRQLN---DYFLKMKDRESIMYPLQVIESVGKYNIFAT 214
Query: 299 VKGGGHVAQVYAIRQAISKALIAF 370
GGG Q +I AI+KAL+ F
Sbjct: 215 TSGGGPTGQAESIMHAIAKALVVF 238
>UniRef50_Q1IU83 Cluster: 30S ribosomal protein S9; n=22; cellular
organisms|Rep: 30S ribosomal protein S9 - Acidobacteria
bacterium (strain Ellin345)
Length = 131
Score = 44.0 bits (99), Expect = 0.005
Identities = 37/133 (27%), Positives = 62/133 (46%)
Frame = +2
Query: 125 GRKQTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMVDIRVTVK 304
GR+++A A + + G G +VNG+ + Q + + L+L E + ++ V
Sbjct: 11 GRRKSAVARVFLRPGSGEFKVNGKGFEEYFVTEAQRQSAKSPLVL-TETIATFNVVANVS 69
Query: 305 GGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKFG 484
GGG Q A++ +++AL Q++ E K + + D R E KK+G
Sbjct: 70 GGGVNGQADAVKMGLARAL----QEFNAELRGKMKAE-------GFMTRDARMKERKKYG 118
Query: 485 GPGARARYQKSYR 523
GAR R+Q S R
Sbjct: 119 QKGARKRFQFSKR 131
>UniRef50_A1CMA0 Cluster: 37S ribosomal protein S9; n=7;
Eurotiomycetidae|Rep: 37S ribosomal protein S9 -
Aspergillus clavatus
Length = 315
Score = 44.0 bits (99), Expect = 0.005
Identities = 38/125 (30%), Positives = 60/125 (48%)
Frame = +2
Query: 125 GRKQTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMVDIRVTVK 304
G+++T++AV + G G + VNG+ L PR L + L + ++ TV+
Sbjct: 195 GKRKTSSAVVHLVEGEGEVMVNGKTLGEAFPR-LHDRESATWALRCTSRLDKYNVWATVR 253
Query: 305 GGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKFG 484
GGG Q A+ A+ +AL+ V E + +K IL + ++ D RR E KK G
Sbjct: 254 GGGVTGQAEAVTLALGRALL------VHEPA---LKPILRK--AGVITVDARRVERKKPG 302
Query: 485 GPGAR 499
AR
Sbjct: 303 HVKAR 307
>UniRef50_Q8DMK7 Cluster: 30S ribosomal protein S9; n=6; cellular
organisms|Rep: 30S ribosomal protein S9 - Synechococcus
elongatus (Thermosynechococcus elongatus)
Length = 137
Score = 44.0 bits (99), Expect = 0.005
Identities = 44/135 (32%), Positives = 62/135 (45%), Gaps = 2/135 (1%)
Frame = +2
Query: 125 GRKQTATAVAYCKRGHGMLRVNGRP-LDLVEPRLLQYKL-QEPILLLGKEKFSMVDIRVT 298
GR+++A A G G L +NGR D ++ + L + P+ LG E + DI V
Sbjct: 16 GRRKSAVARVRLIPGSGQLWINGRNGADYLQNNPIYLNLVKAPLETLGLE--NSYDIYVN 73
Query: 299 VKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKK 478
GGG Q AIR I++AL +D ++K +K L DPR E +K
Sbjct: 74 ATGGGLTGQADAIRLGIARALC-----QLDIENRKPLK------TEGYLTRDPRAKERRK 122
Query: 479 FGGPGARARYQKSYR 523
+G AR Q S R
Sbjct: 123 YGLRKARKAPQYSKR 137
>UniRef50_A3CEI4 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 61
Score = 43.2 bits (97), Expect = 0.009
Identities = 18/32 (56%), Positives = 24/32 (75%)
Frame = +2
Query: 92 SRXPIQAVQVFGRKQTATAVAYCKRGHGMLRV 187
+R P VQ FGRK+TA AV+YCK G G+++V
Sbjct: 6 TRPPPGTVQCFGRKKTAVAVSYCKPGRGLIKV 37
>UniRef50_UPI0000E7FB25 Cluster: PREDICTED: similar to mitochondrial
ribosomal protein S9 isoform 1; n=1; Gallus gallus|Rep:
PREDICTED: similar to mitochondrial ribosomal protein S9
isoform 1 - Gallus gallus
Length = 340
Score = 42.7 bits (96), Expect = 0.012
Identities = 42/123 (34%), Positives = 56/123 (45%)
Frame = +2
Query: 140 ATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMVDIRVTVKGGGHV 319
ATAV Y G G + VNG + P +LQ + Q ++ D TV GGG
Sbjct: 225 ATAVVY-DNGTGKITVNGIDILRYFP-VLQDREQLLFPFQFLDRVGKHDAICTVSGGGRS 282
Query: 320 AQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKFGGPGAR 499
+Q AIR A +KAL + +V E ++ LL DPR E KK G GAR
Sbjct: 283 SQAGAIRLATAKAL----RSFVTET------EVEFMRQAGLLTVDPRVRERKKPGQEGAR 332
Query: 500 ARY 508
++
Sbjct: 333 RKF 335
>UniRef50_O67723 Cluster: 30S ribosomal protein S9; n=2; Aquifex
aeolicus|Rep: 30S ribosomal protein S9 - Aquifex
aeolicus
Length = 147
Score = 42.7 bits (96), Expect = 0.012
Identities = 37/108 (34%), Positives = 52/108 (48%), Gaps = 1/108 (0%)
Frame = +2
Query: 203 DLVEPRLLQYKLQEPILLLGKE-KFSMVDIRVTVKGGGHVAQVYAIRQAISKALIAFYQK 379
+ V+ L K+ P + G E KF I TV+GGG AQ AI ++KAL+
Sbjct: 54 EYVQRETLYNKIMYPFKVTGHEGKFG---IYATVRGGGISAQAEAIMYGVAKALLQH--- 107
Query: 380 YVDEASKKEIKDILVQYDRSLLVADPRRCEPKKFGGPGARARYQKSYR 523
+++ L + LL D R E KK+G GARA+Y+ S R
Sbjct: 108 ------NPDLRPTLKK--AGLLTRDAREKERKKYGQMGARAKYRWSKR 147
>UniRef50_Q9ZDU0 Cluster: 30S ribosomal protein S9; n=29;
Proteobacteria|Rep: 30S ribosomal protein S9 -
Rickettsia prowazekii
Length = 161
Score = 41.9 bits (94), Expect = 0.021
Identities = 44/134 (32%), Positives = 60/134 (44%), Gaps = 1/134 (0%)
Frame = +2
Query: 125 GRKQTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYK-LQEPILLLGKEKFSMVDIRVTV 301
G+++ A A + K G G + VN + L+ P K + +P +L + D+ TV
Sbjct: 41 GKRKNAIARVWLKVGKGKIVVNNKILNQYFPSETYVKTILQPFILT--KTIDQYDVICTV 98
Query: 302 KGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKF 481
KGGG Q AI ISKAL + S IL + LL D R E KK+
Sbjct: 99 KGGGISGQKGAILHGISKAL---------DKSAPCFHAILRK--GGLLTRDSRVVERKKY 147
Query: 482 GGPGARARYQKSYR 523
G AR + Q S R
Sbjct: 148 GQRKARKKTQFSKR 161
>UniRef50_Q7UEY4 Cluster: 30S ribosomal protein S9; n=20;
Bacteria|Rep: 30S ribosomal protein S9 - Rhodopirellula
baltica
Length = 137
Score = 41.9 bits (94), Expect = 0.021
Identities = 39/135 (28%), Positives = 64/135 (47%), Gaps = 2/135 (1%)
Frame = +2
Query: 125 GRKQTATAVAYCKRGHGMLRVNGRPLD--LVEPRLLQYKLQEPILLLGKEKFSMVDIRVT 298
GR++++ A + G G + +NG+ ++ V + +Y + E + G + VD+ +
Sbjct: 17 GRRKSSVARVRVRPGSGKITINGKSIEEYFVNDQH-RYAITETLEAAGLTE--SVDLLIR 73
Query: 299 VKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKK 478
V GGG Q A+R +++AL + DEA ++ + S L D R E KK
Sbjct: 74 VSGGGMTGQAGAVRMGLARALCSH-----DEALHDPMR------EGSFLTRDSRMKERKK 122
Query: 479 FGGPGARARYQKSYR 523
G GAR Q S R
Sbjct: 123 PGLRGARRGVQFSKR 137
>UniRef50_A2R4K9 Cluster: Contig An15c0060, complete genome; n=5;
Pezizomycotina|Rep: Contig An15c0060, complete genome -
Aspergillus niger
Length = 221
Score = 41.1 bits (92), Expect = 0.036
Identities = 38/126 (30%), Positives = 62/126 (49%), Gaps = 1/126 (0%)
Frame = +2
Query: 125 GRKQTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPIL-LLGKEKFSMVDIRVTV 301
G+++ ++AV G G + VNG+ L+ PRL + + + L + ++ TV
Sbjct: 101 GKRKASSAVVQLVEGEGEVLVNGKTLNEAFPRL--HDRESAVWPLRCTSRLDKYNVWATV 158
Query: 302 KGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKF 481
+GGG Q AI A+++AL+ V E + +K IL + ++ D RR E KK
Sbjct: 159 RGGGVTGQAEAITLAVARALL------VHEPA---LKPILRK--AGVVTVDARRVERKKP 207
Query: 482 GGPGAR 499
G AR
Sbjct: 208 GHVKAR 213
>UniRef50_Q2GXL6 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 321
Score = 40.7 bits (91), Expect = 0.048
Identities = 35/126 (27%), Positives = 59/126 (46%), Gaps = 1/126 (0%)
Frame = +2
Query: 125 GRKQTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLL-GKEKFSMVDIRVTV 301
G+++++ A AY G G + +NG+ L R+ + + + L ++ ++ V
Sbjct: 201 GKRKSSIARAYVVEGDGQVLINGKTLPDYFGRI--HDRESAVWALHSTDRIDKYNVWARV 258
Query: 302 KGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKF 481
+GGG Q A+ AI+KAL+A + A K ++ + DPRR E KK
Sbjct: 259 EGGGTTGQAEALTLAIAKALLAH-----EPALKPALR------RAGCVTRDPRRVERKKH 307
Query: 482 GGPGAR 499
G AR
Sbjct: 308 GRVKAR 313
>UniRef50_Q5GS63 Cluster: 30S ribosomal protein S9; n=1; Wolbachia
endosymbiont strain TRS of Brugia malayi|Rep: 30S
ribosomal protein S9 - Wolbachia sp. subsp. Brugia
malayi (strain TRS)
Length = 148
Score = 40.3 bits (90), Expect = 0.063
Identities = 43/139 (30%), Positives = 60/139 (43%), Gaps = 6/139 (4%)
Frame = +2
Query: 125 GRKQTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGK------EKFSMVD 286
GR++ + A + K G G VN + +LL Y +E + + K D
Sbjct: 27 GRRKESAARVWIKSGSGKFSVNQ------QDKLLSYFKRESVCQIVKMPLIVTSTLDKYD 80
Query: 287 IRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRC 466
+ TVKGGG Q A+ ISKAL Q ++ IL + L +
Sbjct: 81 VFATVKGGGLSGQAGALAHGISKALSKISQ---------DLYSILRK--SGYLTRNSCVK 129
Query: 467 EPKKFGGPGARARYQKSYR 523
E KK+G GARA+YQ S R
Sbjct: 130 ERKKYGQRGARAKYQFSKR 148
>UniRef50_A0DAX2 Cluster: Chromosome undetermined scaffold_43, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_43,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 700
Score = 40.3 bits (90), Expect = 0.063
Identities = 37/133 (27%), Positives = 61/133 (45%)
Frame = +2
Query: 125 GRKQTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMVDIRVTVK 304
GR++++ K+G G + VNG+ L + + +L L +VD+ V ++
Sbjct: 580 GRRKSSICYVQLKKGVGEVTVNGKNLINYFTHPIYRRTALRVLELAHLS-CLVDVNVVIR 638
Query: 305 GGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKFG 484
GG AQ I A+S+A++ + + KK + +L L D R+ E KK G
Sbjct: 639 GGSQSAQSQCICSALSRAIVK-----MCPSIKKIFRKLL------LTRTDSRQVERKKLG 687
Query: 485 GPGARARYQKSYR 523
AR +Y S R
Sbjct: 688 LYKARKKYPYSRR 700
>UniRef50_Q7Q0M0 Cluster: ENSANGP00000014497; n=4; Coelomata|Rep:
ENSANGP00000014497 - Anopheles gambiae str. PEST
Length = 84
Score = 39.9 bits (89), Expect = 0.084
Identities = 28/85 (32%), Positives = 42/85 (49%)
Frame = +2
Query: 254 LLGKEKFSMVDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYD 433
LL + + +D+ V GGG +Q A+R I+ AL +F + D+ ++ +
Sbjct: 5 LLFTKMYGKIDVTANVSGGGPSSQAGAVRWGIAMALRSFVDE--DQIARMRV-------- 54
Query: 434 RSLLVADPRRCEPKKFGGPGARARY 508
LL D RR E KK G GAR +Y
Sbjct: 55 AGLLTRDYRRRERKKPGQAGARRKY 79
>UniRef50_O94150 Cluster: 40S ribosomal protein S9, mitochondrial
precursor; n=5; Saccharomycetales|Rep: 40S ribosomal
protein S9, mitochondrial precursor - Candida albicans
(Yeast)
Length = 336
Score = 39.9 bits (89), Expect = 0.084
Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Frame = +2
Query: 128 RKQTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYK-LQEPILLLGKEKFSMVDIRVTVK 304
+++++ A Y +G G + VNG+ L P + K L P ++ +E V +VT
Sbjct: 217 KRKSSIAKIYLVKGEGEVLVNGKSLIEFFPNIYARKNLLYPFQVVEQEGKYNVFAQVT-- 274
Query: 305 GGGHVAQVYAIRQAISKALIAF 370
GGG+ Q AI AI+KAL+ F
Sbjct: 275 GGGYTGQSEAIMYAIAKALVVF 296
>UniRef50_Q82DL8 Cluster: 30S ribosomal protein S9; n=23; cellular
organisms|Rep: 30S ribosomal protein S9 - Streptomyces
avermitilis
Length = 173
Score = 39.1 bits (87), Expect = 0.15
Identities = 40/134 (29%), Positives = 58/134 (43%), Gaps = 1/134 (0%)
Frame = +2
Query: 125 GRKQTATAVAYCKRGHGMLRVNGRPL-DLVEPRLLQYKLQEPILLLGKEKFSMVDIRVTV 301
GR++ A A G G ++NGR L D ++ Q ++ EP +L E D+ +
Sbjct: 52 GRRKNAIARVRIVPGTGKWKINGRTLEDYFPNKVHQQEVNEPFKVLELE--GRYDVIARI 109
Query: 302 KGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKF 481
GGG Q A+R +++AL +EA + L + L D R E KK
Sbjct: 110 SGGGVSGQAGALRLGVARAL--------NEADVDNNRGALKK--AGFLKRDDRAVERKKA 159
Query: 482 GGPGARARYQKSYR 523
G AR Q S R
Sbjct: 160 GLKKARKAPQYSKR 173
>UniRef50_Q7S7R6 Cluster: 40S ribosomal protein S9, mitochondrial
precursor; n=3; Pezizomycotina|Rep: 40S ribosomal
protein S9, mitochondrial precursor - Neurospora crassa
Length = 314
Score = 38.7 bits (86), Expect = 0.19
Identities = 36/125 (28%), Positives = 57/125 (45%)
Frame = +2
Query: 125 GRKQTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMVDIRVTVK 304
G+++ ++A A+ G G + VNG+ L R+ + L + ++ V V+
Sbjct: 194 GKRKASSARAFVVEGTGEVLVNGKTLAEYFGRVHDRE-SAVWALRATNRIDKYNVWVKVE 252
Query: 305 GGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKFG 484
GGG Q AI AI+KAL+A + A K ++ + DPR+ E KK G
Sbjct: 253 GGGTTGQAEAITLAIAKALLAH-----EPALKPALR------RAGCVTRDPRKVERKKHG 301
Query: 485 GPGAR 499
AR
Sbjct: 302 HVKAR 306
>UniRef50_A5FRV9 Cluster: Ribosomal protein S9; n=5; Bacteria|Rep:
Ribosomal protein S9 - Dehalococcoides sp. BAV1
Length = 132
Score = 38.3 bits (85), Expect = 0.26
Identities = 38/135 (28%), Positives = 61/135 (45%), Gaps = 2/135 (1%)
Frame = +2
Query: 125 GRKQTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPIL--LLGKEKFSMVDIRVT 298
GR++TA A G+G++ ++G+P +E R + + + IL ++ + + +
Sbjct: 12 GRRKTAVATVKLMSGNGVIVIDGKP---IEERFTRIQERNVILNPMMVTDTMGKFNAVIK 68
Query: 299 VKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKK 478
V GGG Q AI I++AL + DE + +K LL D R E KK
Sbjct: 69 VLGGGVTGQSGAIAHGIARAL-----EKTDEKLRATLK------SNGLLTRDDRTKERKK 117
Query: 479 FGGPGARARYQKSYR 523
G AR Q + R
Sbjct: 118 PGLKRARKAPQYTKR 132
>UniRef50_Q98Q72 Cluster: 30S ribosomal protein S9; n=66;
Bacteria|Rep: 30S ribosomal protein S9 - Mycoplasma
pulmonis
Length = 136
Score = 38.3 bits (85), Expect = 0.26
Identities = 27/92 (29%), Positives = 45/92 (48%), Gaps = 1/92 (1%)
Frame = +2
Query: 110 AVQVFGRKQTATAVAYCKRGHGMLRVNGRPL-DLVEPRLLQYKLQEPILLLGKEKFSMVD 286
A + GR++++ A +G G +N R + ++ + +P L + + D
Sbjct: 11 AFRGLGRRKSSVARVILLKGSGKFTINKREAKEYLKSDIYIKDALQPFDLT--QTNNTFD 68
Query: 287 IRVTVKGGGHVAQVYAIRQAISKALIAFYQKY 382
IRVTV+GGG Q AIR I++AL+ Y
Sbjct: 69 IRVTVRGGGLAGQAGAIRLGIARALLEISADY 100
>UniRef50_P56358 Cluster: Chloroplast 30S ribosomal protein S9; n=1;
Chlorella vulgaris|Rep: Chloroplast 30S ribosomal
protein S9 - Chlorella vulgaris (Green alga)
Length = 137
Score = 37.5 bits (83), Expect = 0.45
Identities = 28/80 (35%), Positives = 40/80 (50%)
Frame = +2
Query: 284 DIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRR 463
D+ + V+GGG AQ A++ A+SKA + F+ +Y +K K LL D R
Sbjct: 69 DVHILVEGGGLSAQAQAVKLALSKAFVDFFPEY-----RKVFK------KPGLLTRDARI 117
Query: 464 CEPKKFGGPGARARYQKSYR 523
E +K+G AR Q S R
Sbjct: 118 KERRKYGLKKARKAPQFSKR 137
>UniRef50_Q7P3E8 Cluster: 30S ribosomal protein S9; n=1;
Fusobacterium nucleatum subsp. vincentii ATCC 49256|Rep:
30S ribosomal protein S9 - Fusobacterium nucleatum
subsp. vincentii ATCC 49256
Length = 101
Score = 36.7 bits (81), Expect = 0.78
Identities = 26/86 (30%), Positives = 41/86 (47%), Gaps = 1/86 (1%)
Frame = +2
Query: 125 GRKQTATAVAYCKRGHGMLRVNGRPLD-LVEPRLLQYKLQEPILLLGKEKFSMVDIRVTV 301
GR++T+ A G + +NG+ +D R + K+ E L L E + ++V V
Sbjct: 12 GRRKTSVARVRLIPGGQGVEINGKAMDEYFGGRAILSKIVEQPLAL-TETLNKFAVKVNV 70
Query: 302 KGGGHVAQVYAIRQAISKALIAFYQK 379
GGG+ Q AIR K++I K
Sbjct: 71 VGGGNSGQAGAIRHGCCKSIITLLMK 96
>UniRef50_Q1JSU2 Cluster: Ribosomal protein s9, putative; n=1;
Toxoplasma gondii|Rep: Ribosomal protein s9, putative -
Toxoplasma gondii
Length = 286
Score = 36.7 bits (81), Expect = 0.78
Identities = 26/84 (30%), Positives = 41/84 (48%), Gaps = 3/84 (3%)
Frame = +2
Query: 125 GRKQTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYK---LQEPILLLGKEKFSMVDIRV 295
G ++ A A +RG G +RVN DL Y + +P L G + D+ +
Sbjct: 165 GTRKRAAAHVIIRRGTGQVRVNNDE-DLYVRWPFYYNRMDVLQPFFLTGTA--GIYDLFI 221
Query: 296 TVKGGGHVAQVYAIRQAISKALIA 367
V+GGG Q A+R A+ +AL++
Sbjct: 222 HVRGGGSSGQAGAVRLAVGRALVS 245
>UniRef50_A5K195 Cluster: 30S ribosomal protein S9, putative; n=5;
Plasmodium|Rep: 30S ribosomal protein S9, putative -
Plasmodium vivax
Length = 604
Score = 36.7 bits (81), Expect = 0.78
Identities = 39/135 (28%), Positives = 60/135 (44%), Gaps = 2/135 (1%)
Frame = +2
Query: 125 GRKQTATAVAYCKRGHGMLRVNGRP-LDLVEPRLLQY-KLQEPILLLGKEKFSMVDIRVT 298
G+K+ A A+ + +RG+ L +N R ++ ++ K+ P+L L + V RV
Sbjct: 482 GKKKRAVAMVFLQRGNNNLIINNRDGYQYLQYQIFNINKIFSPLLHLCMHRHFNVVARVV 541
Query: 299 VKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKK 478
GGG Q AI A+ KY+ +IK + + D R+ E KK
Sbjct: 542 --GGGLSGQSVAIFHAL--------VKYIVYNLSLKIKPYFRSF--KFMTVDSRKVERKK 589
Query: 479 FGGPGARARYQKSYR 523
+G AR R Q S R
Sbjct: 590 YGLKKARKRKQYSKR 604
>UniRef50_P32060 Cluster: Chloroplast 30S ribosomal protein S9; n=2;
Euglena|Rep: Chloroplast 30S ribosomal protein S9 -
Euglena gracilis
Length = 134
Score = 36.7 bits (81), Expect = 0.78
Identities = 30/113 (26%), Positives = 56/113 (49%), Gaps = 5/113 (4%)
Frame = +2
Query: 104 IQAVQVFGRKQTATAVAYC---KRGHGMLRVNG-RPLDLVEPRLLQYKLQ-EPILLLGKE 268
+ +++V G+++++ A K G G + +NG + + ++ L K+ P LL
Sbjct: 3 LNSIEVIGKRKSSIAKIILFLPKDGGGEILINGEKAFNYLQNNLRTLKVVCSPFELLNIN 62
Query: 269 KFSMVDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQ 427
+ + VKGGG Q AI+ AISK+L F +K ++ K ++ L +
Sbjct: 63 NYK---VHAYVKGGGLSGQADAIKLAISKSLSVFIEK--EDKKKLKVNGFLTR 110
>UniRef50_A7AM60 Cluster: Putative uncharacterized protein; n=1;
Babesia bovis|Rep: Putative uncharacterized protein -
Babesia bovis
Length = 250
Score = 35.5 bits (78), Expect = 1.8
Identities = 40/129 (31%), Positives = 60/129 (46%), Gaps = 3/129 (2%)
Frame = +2
Query: 125 GRKQTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYK---LQEPILLLGKEKFSMVDIRV 295
G +T+ +RG G+++VNG DL + + Y + EP L G + D+ +
Sbjct: 131 GTCMRSTSRVVIQRGSGLVKVNGEE-DLHKRWPIFYNRMDVLEPFYLAG--CCGVYDVFI 187
Query: 296 TVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPK 475
KGGG Q + R AI++AL+ EA+ +K L S L D R+ PK
Sbjct: 188 ETKGGGITGQARSTRLAIARALV--------EAN-PTVKHFL----ESALYEDIRQKMPK 234
Query: 476 KFGGPGARA 502
G GAR+
Sbjct: 235 MPGRTGARS 243
>UniRef50_P03087 Cluster: Capsid protein VP1; n=1927;
Polyomavirus|Rep: Capsid protein VP1 - Simian virus 40
(SV40)
Length = 364
Score = 35.5 bits (78), Expect = 1.8
Identities = 15/19 (78%), Positives = 15/19 (78%)
Frame = +1
Query: 709 DPDMIXYIDEFGQXXTXMQ 765
DPDMI YIDEFGQ T MQ
Sbjct: 346 DPDMIRYIDEFGQTTTRMQ 364
>UniRef50_Q4N5E3 Cluster: 40S ribosomal protein S9, putative; n=2;
Theileria|Rep: 40S ribosomal protein S9, putative -
Theileria parva
Length = 639
Score = 35.1 bits (77), Expect = 2.4
Identities = 37/134 (27%), Positives = 63/134 (47%), Gaps = 1/134 (0%)
Frame = +2
Query: 125 GRKQTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSM-VDIRVTV 301
G+++ A+ Y + G+G + +N R +++L+E + L K + + +I
Sbjct: 517 GKRKRGKAMVYLEPGNGNIIINNRD-GYQYVYYNEFRLREILEPLSKLEINTNFNIVAKT 575
Query: 302 KGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKF 481
KGGG Q AIR A+ +Y+ ++K IL ++D L+ D RR E KK
Sbjct: 576 KGGGISGQSVAIRHAL--------VRYLYRILSPKLKYILRKFD--LVSIDRRRTERKKT 625
Query: 482 GGPGARARYQKSYR 523
AR + + S R
Sbjct: 626 NLRKARKKEKYSKR 639
>UniRef50_A5K530 Cluster: 30S ribosomal protein S9, putative; n=5;
Plasmodium|Rep: 30S ribosomal protein S9, putative -
Plasmodium vivax
Length = 304
Score = 35.1 bits (77), Expect = 2.4
Identities = 27/97 (27%), Positives = 45/97 (46%), Gaps = 2/97 (2%)
Frame = +2
Query: 125 GRKQTATAVAYCKRGHGMLRVNG-RPLDLVEPRLL-QYKLQEPILLLGKEKFSMVDIRVT 298
G + ++A Y KRG G+++VN L + P + + EP + + D+ +
Sbjct: 183 GTNKRSSAYVYIKRGSGIVKVNDEEDLYIRWPYFYNRMDVLEPFYVTNTA--CVFDVFIK 240
Query: 299 VKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEI 409
+KGGG Q A R A+ +AL+ DE + I
Sbjct: 241 LKGGGISGQSKAARLAVGRALLNACPLIYDELKQHHI 277
>UniRef50_A0UPY8 Cluster: Putative uncharacterized protein
precursor; n=12; Burkholderia|Rep: Putative
uncharacterized protein precursor - Burkholderia
multivorans ATCC 17616
Length = 848
Score = 34.7 bits (76), Expect = 3.2
Identities = 26/88 (29%), Positives = 45/88 (51%)
Frame = +2
Query: 179 LRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMVDIRVTVKGGGHVAQVYAIRQAISKA 358
LRV+GR V L+ +L+ + LLG+E + +D+ V+ G + QV A +
Sbjct: 499 LRVDGRERVAVFAELVDDRLRRLLQLLGRETIARLDLDQLVQFGFAIEQVARQLDARHRV 558
Query: 359 LIAFYQKYVDEASKKEIKDILVQYDRSL 442
+AF Q+ +++ +LV+ DR L
Sbjct: 559 RLAFVQR------DRQVHVLLVRRDRHL 580
>UniRef50_O20029 Cluster: Chloroplast 30S ribosomal protein S9; n=1;
Chlamydomonas reinhardtii|Rep: Chloroplast 30S ribosomal
protein S9 - Chlamydomonas reinhardtii
Length = 191
Score = 34.7 bits (76), Expect = 3.2
Identities = 28/96 (29%), Positives = 40/96 (41%), Gaps = 4/96 (4%)
Frame = +2
Query: 203 DLVEPRLLQYKLQEPILLL----GKEKFSMVDIRVTVKGGGHVAQVYAIRQAISKALIAF 370
D+V P L L+ L G E D V VKGGG + Q AIR IS+AL
Sbjct: 62 DMVSPDLSLTNLESTFTNLMQFSGGENAVKFDTIVKVKGGGLMGQTEAIRLGISRALCLL 121
Query: 371 YQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKK 478
A++ + +I + +A P + +K
Sbjct: 122 STNTNPSANQNNLPNIYIPEGEGEALAIPNASDIRK 157
>UniRef50_Q5RBV9 Cluster: Putative uncharacterized protein
DKFZp469B0933; n=7; Theria|Rep: Putative uncharacterized
protein DKFZp469B0933 - Pongo pygmaeus (Orangutan)
Length = 300
Score = 34.3 bits (75), Expect = 4.2
Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
Frame = +2
Query: 314 HVAQVYAIRQAISKALIAFYQKYVD--EASKKEIKDILVQYDRSLLVADPRRCEPKKF 481
H++QV++ ++ + LIAFY+ + E + +E + LV D+ L V E KKF
Sbjct: 73 HISQVWSFQKKQTDLLIAFYKHRITKLETAMQETQQALVSQDKELSVLRKENGELKKF 130
>UniRef50_A7PLL5 Cluster: Chromosome chr7 scaffold_20, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr7 scaffold_20, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 651
Score = 33.5 bits (73), Expect = 7.3
Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 2/82 (2%)
Frame = +3
Query: 69 NGLLCRXQAVXPSRPSKYSDVSKPPPQLRIASVVMECCV*TGAHWTWLSPDC--CSTNFR 242
+GL C+ V R S + ++ L++ ++ ++ C H T L DC C N
Sbjct: 146 DGLACQ---VLKLRSSHFQKLNMVGGFLQLHTLNLDYCT----HLTSLQKDCFACMPNLM 198
Query: 243 NLSFCSARKNSLWLTSE*QSRV 308
LS C R +LW TS S++
Sbjct: 199 RLSMCETRVANLWTTSAVLSKI 220
>UniRef50_A6FKA8 Cluster: Cation/multidrug efflux pump, RND
superfamily protein; n=3; Roseobacter sp. AzwK-3b|Rep:
Cation/multidrug efflux pump, RND superfamily protein -
Roseobacter sp. AzwK-3b
Length = 561
Score = 33.1 bits (72), Expect = 9.6
Identities = 23/59 (38%), Positives = 29/59 (49%), Gaps = 7/59 (11%)
Frame = +1
Query: 88 GKPXAHPGRPSIRT*ANRHRSCVLQA----WSWNA---ACKRAPIGLG*AQTAAVQTSG 243
G P A P PS R A R+R+ V++A W A AC A GLG + V +SG
Sbjct: 496 GSPVARPAAPSARRLARRYRAVVIRALRLRWLCQAGAWACGVALCGLGAQSSRGVHSSG 554
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 740,806,627
Number of Sequences: 1657284
Number of extensions: 13759522
Number of successful extensions: 33401
Number of sequences better than 10.0: 70
Number of HSP's better than 10.0 without gapping: 32457
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33358
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 79112361923
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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