Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP04_F_C19
         (883 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_01_0152 - 1168928-1169377                                          213   2e-55
11_01_0155 - 1287003-1287452                                          213   2e-55
07_03_1553 - 27653473-27653490,27653634-27653673,27653852-276539...    37   0.025
07_03_0227 - 15398371-15398925                                         30   2.1  
08_01_0379 + 3371125-3371988                                           29   6.5  

>12_01_0152 - 1168928-1169377
          Length = 149

 Score =  213 bits (519), Expect = 2e-55
 Identities = 94/144 (65%), Positives = 120/144 (83%)
 Frame = +2

Query: 92  SRXPIQAVQVFGRKQTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEK 271
           +R P   VQ FGRK+TA AV+YCK G G+++VNG P++L+ P +L+ K  EPILL G+ +
Sbjct: 6   TRPPPGTVQCFGRKKTAVAVSYCKPGRGLIKVNGVPIELIRPEMLRLKAFEPILLAGRSR 65

Query: 272 FSMVDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVA 451
           F  +D+R+ V+GGG  +Q+YAIRQAI+KAL+A+YQKYVDEASKKE+KDI  +YDR+LLVA
Sbjct: 66  FKDIDMRIRVRGGGKTSQIYAIRQAIAKALVAYYQKYVDEASKKEVKDIFARYDRTLLVA 125

Query: 452 DPRRCEPKKFGGPGARARYQKSYR 523
           DPRRCEPKKFGG GARAR+QKSYR
Sbjct: 126 DPRRCEPKKFGGRGARARFQKSYR 149


>11_01_0155 - 1287003-1287452
          Length = 149

 Score =  213 bits (519), Expect = 2e-55
 Identities = 94/144 (65%), Positives = 120/144 (83%)
 Frame = +2

Query: 92  SRXPIQAVQVFGRKQTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEK 271
           +R P   VQ FGRK+TA AV+YCK G G+++VNG P++L+ P +L+ K  EPILL G+ +
Sbjct: 6   TRPPPGTVQCFGRKKTAVAVSYCKPGRGLIKVNGVPIELIRPEMLRLKAFEPILLAGRSR 65

Query: 272 FSMVDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVA 451
           F  +D+R+ V+GGG  +Q+YAIRQAI+KAL+A+YQKYVDEASKKE+KDI  +YDR+LLVA
Sbjct: 66  FKDIDMRIRVRGGGKTSQIYAIRQAIAKALVAYYQKYVDEASKKEVKDIFARYDRTLLVA 125

Query: 452 DPRRCEPKKFGGPGARARYQKSYR 523
           DPRRCEPKKFGG GARAR+QKSYR
Sbjct: 126 DPRRCEPKKFGGRGARARFQKSYR 149


>07_03_1553 -
           27653473-27653490,27653634-27653673,27653852-27653939,
           27654150-27654230,27654644-27655084,27655692-27656325
          Length = 433

 Score = 36.7 bits (81), Expect = 0.025
 Identities = 25/79 (31%), Positives = 38/79 (48%)
 Frame = +2

Query: 125 GRKQTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMVDIRVTVK 304
           G+++ + A  + + G G   VN +  D   P +L ++          +     D+  TVK
Sbjct: 295 GKRKCSIARVWIQPGDGKFIVNDKQFDSYFP-ILDHRADLLRPFTVTKTLGRWDVTCTVK 353

Query: 305 GGGHVAQVYAIRQAISKAL 361
           GGG   QV AIR  IS+AL
Sbjct: 354 GGGVSGQVGAIRLGISRAL 372


>07_03_0227 - 15398371-15398925
          Length = 184

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 12/39 (30%), Positives = 18/39 (46%), Gaps = 2/39 (5%)
 Frame = -3

Query: 245 VPEVCTAAVWAQPSPMGARLHAAFH--DHACNTQLRWRF 135
           +P +C A  W  P+   A  H  FH     C+ + RW +
Sbjct: 23  LPPLCRAPWWPSPASSAAATHLRFHPRHRRCHPRRRWSY 61


>08_01_0379 + 3371125-3371988
          Length = 287

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 18/43 (41%), Positives = 21/43 (48%)
 Frame = +2

Query: 89  ASRXPIQAVQVFGRKQTATAVAYCKRGHGMLRVNGRPLDLVEP 217
           A+  P  A  +FGR QTA  V+Y   GHG        LD V P
Sbjct: 181 ATAMPAAAWPLFGRVQTAAPVSY-GGGHGSAAAATMFLDTVAP 222


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,887,748
Number of Sequences: 37544
Number of extensions: 412129
Number of successful extensions: 1045
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1019
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1045
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2491484208
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)