Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP04_F_C18
         (895 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    25   3.1  
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    24   5.4  
AJ439060-5|CAD27756.1|  245|Anopheles gambiae putative deoxynucl...    24   7.2  
AF488801-1|AAO49462.1|  246|Anopheles gambiae multisubstrate deo...    24   7.2  

>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 25.0 bits (52), Expect = 3.1
 Identities = 14/34 (41%), Positives = 17/34 (50%)
 Frame = +3

Query: 261 QLSSEALEAGRICCNKYLVKNCGKDQFHIRMRLH 362
           +L+ E L  G   CN +  K CGK   HIR   H
Sbjct: 487 RLTFERLSGG---CNLHRCKLCGKVVTHIRNHYH 517


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 24.2 bits (50), Expect = 5.4
 Identities = 22/77 (28%), Positives = 36/77 (46%)
 Frame = +1

Query: 487 PSCPCALVTGGRHRSSRLCAVPSSSSPDVKRSTYQRSGVSQSMNVMSLRSCVKRAASPMT 666
           P+ P + +  G    + L  V    +P+ K S   +S + +S+NV+S+      AA  M 
Sbjct: 685 PASPASSIKSGYGEGAPLAIV----APE-KNSV--KSAIVKSINVVSI------AAKTMR 731

Query: 667 AASCSTARNMDLSTLGG 717
              CS+    D S +GG
Sbjct: 732 EGRCSSVSGGDWSPMGG 748


>AJ439060-5|CAD27756.1|  245|Anopheles gambiae putative
           deoxynucleoside kinase protein.
          Length = 245

 Score = 23.8 bits (49), Expect = 7.2
 Identities = 10/52 (19%), Positives = 25/52 (48%)
 Frame = +1

Query: 610 SMNVMSLRSCVKRAASPMTAASCSTARNMDLSTLGGRFRLRSSMYNLINTFY 765
           ++ ++ + +C    +  +   S  +ARN  + ++     L   MYN++  +Y
Sbjct: 80  TLTMLDMHTCQTDKSVKLMERSLFSARNCFVESMLASGSLHQGMYNVLQEWY 131


>AF488801-1|AAO49462.1|  246|Anopheles gambiae multisubstrate
           deoxyribonucleoside kinaseprotein.
          Length = 246

 Score = 23.8 bits (49), Expect = 7.2
 Identities = 10/52 (19%), Positives = 25/52 (48%)
 Frame = +1

Query: 610 SMNVMSLRSCVKRAASPMTAASCSTARNMDLSTLGGRFRLRSSMYNLINTFY 765
           ++ ++ + +C    +  +   S  +ARN  + ++     L   MYN++  +Y
Sbjct: 80  TLTMLDMHTCQTDKSVKLMERSLFSARNCFVESMLASGSLHQGMYNVLQEWY 131


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 900,599
Number of Sequences: 2352
Number of extensions: 19778
Number of successful extensions: 37
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 96334083
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)