Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP04_F_C18
         (895 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-3757|AAG22453.3|  237|Drosophila melanogaster CG17521-P...   431   e-121
AE014296-3758|AAF45440.2|  231|Drosophila melanogaster CG17521-P...   430   e-120
U49721-1|AAC16108.1|  218|Drosophila melanogaster QM homolog pro...   429   e-120
AY070910-1|AAL48532.1|  218|Drosophila melanogaster RE02339p pro...   429   e-120
BT003580-1|AAO39584.1|  197|Drosophila melanogaster LD24589p pro...   220   2e-57

>AE014296-3757|AAG22453.3|  237|Drosophila melanogaster CG17521-PB,
           isoform B protein.
          Length = 237

 Score =  431 bits (1061), Expect = e-121
 Identities = 194/225 (86%), Positives = 208/225 (92%), Gaps = 1/225 (0%)
 Frame = +3

Query: 63  WCHFVK-ITMGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRANVDDFPLCVH 239
           W   V  + MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLG+K+A V+DFPLCVH
Sbjct: 11  WKRLVSGVEMGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGRKKATVEDFPLCVH 70

Query: 240 LVSDEYEQLSSEALEAGRICCNKYLVKNCGKDQFHIRMRLHPFHVIRINKMLSCAGADRL 419
           LVSDEYEQLSSEALEAGRICCNKYLVK CGKDQFHIRMRLHPFHVIRINKMLSCAGADRL
Sbjct: 71  LVSDEYEQLSSEALEAGRICCNKYLVKYCGKDQFHIRMRLHPFHVIRINKMLSCAGADRL 130

Query: 420 QTGMRGAFGKPQGTVARVRIGQPIMSVRSSDRWKAQVIEALRRAKFKFPGRQKIYVSKKW 599
           QTGMRGAFGKPQGTVARVRIGQPIMSVRSSDR+KAQVIEALRRAKFKFPGRQKIYVSKKW
Sbjct: 131 QTGMRGAFGKPQGTVARVRIGQPIMSVRSSDRYKAQVIEALRRAKFKFPGRQKIYVSKKW 190

Query: 600 GFTKYERDEFEKLREEGRLANDGCIVQYRPEHGPLDAWRKVQAEI 734
           GFTKYER+ +E+LR++ RL  DGC V+YRPEHGP+ AW K Q ++
Sbjct: 191 GFTKYERERYEELRDDNRLEPDGCNVKYRPEHGPIAAWEKAQRDV 235


>AE014296-3758|AAF45440.2|  231|Drosophila melanogaster CG17521-PA,
           isoform A protein.
          Length = 231

 Score =  430 bits (1060), Expect = e-120
 Identities = 192/218 (88%), Positives = 206/218 (94%)
 Frame = +3

Query: 81  ITMGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRANVDDFPLCVHLVSDEYE 260
           + MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLG+K+A V+DFPLCVHLVSDEYE
Sbjct: 12  VEMGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGRKKATVEDFPLCVHLVSDEYE 71

Query: 261 QLSSEALEAGRICCNKYLVKNCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGA 440
           QLSSEALEAGRICCNKYLVK CGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGA
Sbjct: 72  QLSSEALEAGRICCNKYLVKYCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGA 131

Query: 441 FGKPQGTVARVRIGQPIMSVRSSDRWKAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYER 620
           FGKPQGTVARVRIGQPIMSVRSSDR+KAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYER
Sbjct: 132 FGKPQGTVARVRIGQPIMSVRSSDRYKAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYER 191

Query: 621 DEFEKLREEGRLANDGCIVQYRPEHGPLDAWRKVQAEI 734
           + +E+LR++ RL  DGC V+YRPEHGP+ AW K Q ++
Sbjct: 192 ERYEELRDDNRLEPDGCNVKYRPEHGPIAAWEKAQRDV 229


>U49721-1|AAC16108.1|  218|Drosophila melanogaster QM homolog
           protein.
          Length = 218

 Score =  429 bits (1058), Expect = e-120
 Identities = 192/216 (88%), Positives = 205/216 (94%)
 Frame = +3

Query: 87  MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRANVDDFPLCVHLVSDEYEQL 266
           MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLG+K+A V+DFPLCVHLVSDEYEQL
Sbjct: 1   MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGRKKATVEDFPLCVHLVSDEYEQL 60

Query: 267 SSEALEAGRICCNKYLVKNCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFG 446
           SSEALEAGRICCNKYLVK CGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAGRICCNKYLVKYCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFG 120

Query: 447 KPQGTVARVRIGQPIMSVRSSDRWKAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYERDE 626
           KPQGTVARVRIGQPIMSVRSSDR+KAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYER+ 
Sbjct: 121 KPQGTVARVRIGQPIMSVRSSDRYKAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYERER 180

Query: 627 FEKLREEGRLANDGCIVQYRPEHGPLDAWRKVQAEI 734
           +E+LR++ RL  DGC V+YRPEHGP+ AW K Q ++
Sbjct: 181 YEELRDDNRLEPDGCNVKYRPEHGPIAAWEKAQRDV 216


>AY070910-1|AAL48532.1|  218|Drosophila melanogaster RE02339p
           protein.
          Length = 218

 Score =  429 bits (1058), Expect = e-120
 Identities = 192/216 (88%), Positives = 205/216 (94%)
 Frame = +3

Query: 87  MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRANVDDFPLCVHLVSDEYEQL 266
           MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLG+K+A V+DFPLCVHLVSDEYEQL
Sbjct: 1   MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGRKKATVEDFPLCVHLVSDEYEQL 60

Query: 267 SSEALEAGRICCNKYLVKNCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFG 446
           SSEALEAGRICCNKYLVK CGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAGRICCNKYLVKYCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFG 120

Query: 447 KPQGTVARVRIGQPIMSVRSSDRWKAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYERDE 626
           KPQGTVARVRIGQPIMSVRSSDR+KAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYER+ 
Sbjct: 121 KPQGTVARVRIGQPIMSVRSSDRYKAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYERER 180

Query: 627 FEKLREEGRLANDGCIVQYRPEHGPLDAWRKVQAEI 734
           +E+LR++ RL  DGC V+YRPEHGP+ AW K Q ++
Sbjct: 181 YEELRDDNRLEPDGCNVKYRPEHGPIAAWEKAQRDV 216


>BT003580-1|AAO39584.1|  197|Drosophila melanogaster LD24589p
           protein.
          Length = 197

 Score =  220 bits (537), Expect = 2e-57
 Identities = 125/220 (56%), Positives = 145/220 (65%), Gaps = 2/220 (0%)
 Frame = +3

Query: 81  ITMGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRANVDDFPLCVHLVSDEYE 260
           + MGRRPARCYRY           C+  P PK R F  G     +  F L          
Sbjct: 5   VEMGRRPARCYRY-----------CKNKPYPKSR-FCRGVPDPKIRIFDL---------- 42

Query: 261 QLSSEALEAGRICCNKYLVKNCGKDQFHIRMRLHPFHVIRI--NKMLSCAGADRLQTGMR 434
                 +E   +C   +LV     D++  ++        RI  NKMLSCAGADRLQTGMR
Sbjct: 43  GRKKATVEDFPLCV--HLVS----DEYE-QLSSEALEAGRICCNKMLSCAGADRLQTGMR 95

Query: 435 GAFGKPQGTVARVRIGQPIMSVRSSDRWKAQVIEALRRAKFKFPGRQKIYVSKKWGFTKY 614
           GAFGKPQGTVARVRIGQPIMSVRSSDR+KAQVIEALRRAKFKFPGRQKIYVSKKWGFTKY
Sbjct: 96  GAFGKPQGTVARVRIGQPIMSVRSSDRYKAQVIEALRRAKFKFPGRQKIYVSKKWGFTKY 155

Query: 615 ERDEFEKLREEGRLANDGCIVQYRPEHGPLDAWRKVQAEI 734
           ER+ +E+LR++ RL  DGC V+YRPEHGP+ AW K Q ++
Sbjct: 156 ERERYEELRDDNRLEPDGCNVKYRPEHGPIAAWEKAQRDV 195


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 39,386,948
Number of Sequences: 53049
Number of extensions: 915478
Number of successful extensions: 2816
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2647
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2815
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4341591036
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)