Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP04_F_C17
(898 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_03_0005 + 11568545-11569119,11569179-11569191 33 0.31
09_02_0603 - 11150739-11150746,11150791-11151340 30 2.2
05_01_0364 + 2855760-2855801,2855940-2856015,2856759-2857747 30 2.2
11_06_0557 - 24955837-24956214,24957225-24957395,24957576-249576... 30 2.9
05_01_0142 - 940421-940701,941262-941574 30 2.9
03_02_0178 + 6195402-6199158,6199438-6200003 30 2.9
09_02_0468 - 9608922-9610061 29 3.8
07_03_0329 + 16840051-16840917,16840999-16841342,16841444-168415... 29 3.8
03_02_0594 - 9695616-9696042,9696646-9697260,9697410-9697717,970... 29 3.8
10_01_0280 - 2945929-2946437,2946541-2946649 29 5.0
10_01_0279 - 2938189-2938697,2938800-2938965 29 5.0
10_01_0277 - 2929266-2929686,2929735-2929774,2929885-2930050 29 5.0
07_03_1136 + 24218601-24218734,24218769-24219906 29 5.0
04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076 29 5.0
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 29 6.6
09_02_0495 + 9880714-9881196 29 6.6
07_01_0080 + 587674-588510 29 6.6
01_01_0082 + 625198-625719 29 6.6
12_02_0859 - 23751198-23753258 24 7.3
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943... 28 8.8
02_05_0717 + 31190626-31191234,31191954-31192394,31192699-311928... 28 8.8
01_07_0188 - 41866689-41866763,41866889-41867155,41867277-418677... 28 8.8
>01_03_0005 + 11568545-11569119,11569179-11569191
Length = 195
Score = 33.1 bits (72), Expect = 0.31
Identities = 19/58 (32%), Positives = 20/58 (34%), Gaps = 2/58 (3%)
Frame = -3
Query: 707 PPPPPPXAXXXGXMGGGTXXXPQKXXPXXXGXGGFFXXXK--XXPPPPGXGKXXXNXW 540
PPPP + G GGGT P G GG PPP G G W
Sbjct: 70 PPPPSYPSGGGGGGGGGTVMYTSPPPPYSGGGGGSSTGGGGIYYPPPTGGGGGGGGGW 127
Score = 31.9 bits (69), Expect = 0.71
Identities = 19/63 (30%), Positives = 20/63 (31%)
Frame = +3
Query: 540 PXVSXXFXGSGGGGGXFXRXKKPPXPXGXGXXFLXXXXXXXXXXXXXPGXRGGGXGFXXX 719
P S G GGGGG PP P G G GGG G+
Sbjct: 71 PPPSYPSGGGGGGGGGTVMYTSPPPPYSGGGGGSSTGGGGIYYPPPTGGGGGGGGGWQQG 130
Query: 720 XGG 728
GG
Sbjct: 131 GGG 133
>09_02_0603 - 11150739-11150746,11150791-11151340
Length = 185
Score = 30.3 bits (65), Expect = 2.2
Identities = 22/68 (32%), Positives = 23/68 (33%), Gaps = 3/68 (4%)
Frame = -3
Query: 755 PRFFGXNGXTPXXXXKPPPPPPXAXXXGXMGGGTXXXPQKXXPXXXGXGGFF---XXXKX 585
PR N P PPPPPP G PQ P G FF +
Sbjct: 28 PRLEKGNFALPPPFGFPPPPPP--------GSTFVPLPQSGVPPPPPLGSFFVPPPQSRV 79
Query: 584 XPPPPGXG 561
PPPP G
Sbjct: 80 PPPPPQLG 87
>05_01_0364 + 2855760-2855801,2855940-2856015,2856759-2857747
Length = 368
Score = 30.3 bits (65), Expect = 2.2
Identities = 15/33 (45%), Positives = 15/33 (45%)
Frame = -2
Query: 705 PXPPPGGXGXXXNGGGNXXGXPKXKXXXPGGGG 607
P PPG G GGG G K K GGGG
Sbjct: 200 PVAPPGN-GNGGGGGGGGGGKKKGKKGGGGGGG 231
>11_06_0557 -
24955837-24956214,24957225-24957395,24957576-24957635,
24958419-24958623,24958710-24958953,24959103-24959394,
24959734-24960828,24960915-24961409,24961665-24961823,
24961893-24962387
Length = 1197
Score = 29.9 bits (64), Expect = 2.9
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -3
Query: 743 GXNGXTPXXXXKPPPPPPXAXXXGXMGGG 657
G +G +P PPPP A G +GGG
Sbjct: 49 GADGGSPASRAASPPPPTAAGGQGGVGGG 77
>05_01_0142 - 940421-940701,941262-941574
Length = 197
Score = 29.9 bits (64), Expect = 2.9
Identities = 14/34 (41%), Positives = 15/34 (44%)
Frame = +2
Query: 593 PXXKTPPPPGXXXXXFGXPXXFPPPLXXXPXPPG 694
P PPPPG P +PPP P PPG
Sbjct: 36 PPQGYPPPPGAYPPP---PGAYPPPPGAYPPPPG 66
>03_02_0178 + 6195402-6199158,6199438-6200003
Length = 1440
Score = 29.9 bits (64), Expect = 2.9
Identities = 16/50 (32%), Positives = 19/50 (38%), Gaps = 1/50 (2%)
Frame = -3
Query: 707 PPPPPPXAXXXGXMGGGTXXXPQKXXPXXXGXGGFF-XXXKXXPPPPGXG 561
PPPPPP G G + G GGF+ + P P G G
Sbjct: 24 PPPPPPPRRRPGDYDGDGFDRRKGFGGGGGGGGGFYDHRYRESPSPRGYG 73
Score = 28.7 bits (61), Expect = 6.6
Identities = 13/26 (50%), Positives = 15/26 (57%), Gaps = 2/26 (7%)
Frame = +3
Query: 558 FXGSGGGGGXF--XRXKKPPXPXGXG 629
F G GGGGG F R ++ P P G G
Sbjct: 48 FGGGGGGGGGFYDHRYRESPSPRGYG 73
>09_02_0468 - 9608922-9610061
Length = 379
Score = 29.5 bits (63), Expect = 3.8
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = -3
Query: 710 KPPPPPPXAXXXGXMGGG 657
KPPPPPP G GGG
Sbjct: 346 KPPPPPPATTSNGGGGGG 363
>07_03_0329 +
16840051-16840917,16840999-16841342,16841444-16841574,
16841671-16841792,16841877-16841983,16842104-16842236,
16842342-16842458,16842560-16842667,16842716-16842742,
16842759-16842830,16843462-16843584,16843671-16843833,
16844140-16844264,16844355-16844489,16844574-16844677,
16844772-16844834,16844930-16844993,16845186-16845318,
16845414-16845487,16845603-16845697,16845799-16845830,
16846201-16846355
Length = 1097
Score = 29.5 bits (63), Expect = 3.8
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = -2
Query: 693 PGGXGXXXNGGGNXXGXPKXKXXXPGGGG 607
PGG G GGG G P GGGG
Sbjct: 52 PGGRGGGYGGGGGGGGPPYYGGGGGGGGG 80
>03_02_0594 -
9695616-9696042,9696646-9697260,9697410-9697717,
9700145-9700235,9700698-9700759,9701256-9702962,
9703789-9703870,9703972-9704057,9704855-9704968,
9705113-9705163,9705261-9705358,9707084-9707546
Length = 1367
Score = 29.5 bits (63), Expect = 3.8
Identities = 14/44 (31%), Positives = 18/44 (40%)
Frame = -2
Query: 699 PPPGGXGXXXNGGGNXXGXPKXKXXXPGGGGVFXXGKXXPPPPR 568
P GG G G G+ + + P GV G PPPP+
Sbjct: 90 PHSGGGGGGGEGMGSEGVGRRRRVVAPAVNGVAKDGAPQPPPPK 133
>10_01_0280 - 2945929-2946437,2946541-2946649
Length = 205
Score = 29.1 bits (62), Expect = 5.0
Identities = 14/38 (36%), Positives = 15/38 (39%)
Frame = -2
Query: 714 KXTPXPPPGGXGXXXNGGGNXXGXPKXKXXXPGGGGVF 601
K TP P GG G NGGG G P V+
Sbjct: 167 KPTPLPANGGGGGAGNGGGGAQGNSGGAAPSPSSPPVY 204
>10_01_0279 - 2938189-2938697,2938800-2938965
Length = 224
Score = 29.1 bits (62), Expect = 5.0
Identities = 14/38 (36%), Positives = 15/38 (39%)
Frame = -2
Query: 714 KXTPXPPPGGXGXXXNGGGNXXGXPKXKXXXPGGGGVF 601
K TP P GG G NGGG G P V+
Sbjct: 186 KPTPLPANGGGGGAGNGGGGAQGNSGGAAPSPSSPPVY 223
>10_01_0277 - 2929266-2929686,2929735-2929774,2929885-2930050
Length = 208
Score = 29.1 bits (62), Expect = 5.0
Identities = 14/38 (36%), Positives = 15/38 (39%)
Frame = -2
Query: 714 KXTPXPPPGGXGXXXNGGGNXXGXPKXKXXXPGGGGVF 601
K TP P GG G NGGG G P V+
Sbjct: 170 KPTPLPANGGGGGAGNGGGGAQGNSGGAAPSPSSPPVY 207
>07_03_1136 + 24218601-24218734,24218769-24219906
Length = 423
Score = 29.1 bits (62), Expect = 5.0
Identities = 13/31 (41%), Positives = 14/31 (45%)
Frame = -2
Query: 699 PPPGGXGXXXNGGGNXXGXPKXKXXXPGGGG 607
P GG G GGG G P+ GGGG
Sbjct: 199 PGGGGGGGGLGGGGGEGGAPERVIGGGGGGG 229
Score = 28.7 bits (61), Expect = 6.6
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = -2
Query: 696 PPGGXGXXXNGGGNXXGXPKXKXXXPGGGG 607
P GG G GGG G P GGGG
Sbjct: 100 PLGGGGARPPGGGGGGGPPSLPPGAGGGGG 129
>04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076
Length = 906
Score = 29.1 bits (62), Expect = 5.0
Identities = 22/81 (27%), Positives = 24/81 (29%), Gaps = 4/81 (4%)
Frame = +2
Query: 593 PXXKTPPPPGXXXXXFGX----PXXFPPPLXXXPXPPGGGXGVXXXXXGXXRXSQKTGGX 760
P PPPP G P PP P PPG G G R GG
Sbjct: 328 PAAPAPPPPAPSPSAAGAGSGPPPPPPPAAPAAPRPPGPGPGPPPPPGAAGRGG---GGP 384
Query: 761 PXKKXXXXXAXKXPGTXKXAP 823
P + P K +P
Sbjct: 385 PPPALPGGPRARGPPPFKKSP 405
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 28.7 bits (61), Expect = 6.6
Identities = 14/53 (26%), Positives = 18/53 (33%)
Frame = -3
Query: 728 TPXXXXKPPPPPPXAXXXGXMGGGTXXXPQKXXPXXXGXGGFFXXXKXXPPPP 570
+P PPPPPP G + P P + + PPPP
Sbjct: 538 SPTAAAPPPPPPPPPPPSGNKPAFSPPPPPPPPPPPPLPQSNYASSQPPPPPP 590
Score = 28.7 bits (61), Expect = 6.6
Identities = 25/93 (26%), Positives = 26/93 (27%)
Frame = +2
Query: 581 GXXXPXXKTPPPPGXXXXXFGXPXXFPPPLXXXPXPPGGGXGVXXXXXGXXRXSQKTGGX 760
G P PPPP P PPL P P + K
Sbjct: 705 GPGVPSAPPPPPPPPPANRSNGPSAPAPPLPP-PLPAAANKRNPPAPPPPPLMTGKKA-- 761
Query: 761 PXKKXXXXXAXKXPGTXKXAPXXXGFSKXPPPP 859
P A K PGT P G S P PP
Sbjct: 762 PAPPPPPPQAPKPPGTVPPPPPLHGASGRPHPP 794
>09_02_0495 + 9880714-9881196
Length = 160
Score = 28.7 bits (61), Expect = 6.6
Identities = 14/40 (35%), Positives = 14/40 (35%)
Frame = +2
Query: 572 GGGGXXXPXXKTPPPPGXXXXXFGXPXXFPPPLXXXPXPP 691
GG G PPPPG F P P P PP
Sbjct: 69 GGAGGLFGGTYPPPPPGVMPGAFAPPFGGGFPYGPAPPPP 108
>07_01_0080 + 587674-588510
Length = 278
Score = 28.7 bits (61), Expect = 6.6
Identities = 12/30 (40%), Positives = 13/30 (43%)
Frame = +2
Query: 602 KTPPPPGXXXXXFGXPXXFPPPLXXXPXPP 691
+ PPPP G P PPP P PP
Sbjct: 89 RRPPPPPPPPPSSGSPPPPPPPPPPPPPPP 118
>01_01_0082 + 625198-625719
Length = 173
Score = 28.7 bits (61), Expect = 6.6
Identities = 15/41 (36%), Positives = 16/41 (39%), Gaps = 3/41 (7%)
Frame = +2
Query: 593 PXXKTPPPPGXXXXXFGXPXXFPPPL---XXXPXPPGGGXG 706
P PPPP P +PPP P PP GG G
Sbjct: 62 PVYYPPPPPVYYPPPSPPPVAYPPPTTPSTNCPPPPYGGGG 102
>12_02_0859 - 23751198-23753258
Length = 686
Score = 23.8 bits (49), Expect(2) = 7.3
Identities = 8/15 (53%), Positives = 9/15 (60%)
Frame = -3
Query: 707 PPPPPPXAXXXGXMG 663
PPPPPP G +G
Sbjct: 627 PPPPPPPPVSSGEVG 641
Score = 23.0 bits (47), Expect(2) = 7.3
Identities = 8/21 (38%), Positives = 9/21 (42%)
Frame = -3
Query: 752 RFFGXNGXTPXXXXKPPPPPP 690
R+ G PPPPPP
Sbjct: 613 RYLDAGGAAEVPEPPPPPPPP 633
>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
9435445-9435526,9435610-9435660,9435749-9435829,
9435965-9436006,9436117-9436215,9438130-9438201,
9438557-9438680,9438850-9439723,9440274-9440456,
9440941-9442741,9442825-9443049,9443117-9443814,
9444519-9444591
Length = 1541
Score = 28.3 bits (60), Expect = 8.8
Identities = 25/84 (29%), Positives = 26/84 (30%)
Frame = -3
Query: 818 PFXGFXAXWXPXXPKXFSXGXPRFFGXNGXTPXXXXKPPPPPPXAXXXGXMGGGTXXXPQ 639
P G P P F G P G P PPPPP G +GG
Sbjct: 1153 PVGGLGGPPAPPPPAGFRGGTPPPNAHGGVAP------PPPPP--RGHGGVGGPPTPPGA 1204
Query: 638 KXXPXXXGXGGFFXXXKXXPPPPG 567
P G G PPPPG
Sbjct: 1205 PAPPMPPGVPG------GPPPPPG 1222
>02_05_0717 +
31190626-31191234,31191954-31192394,31192699-31192802,
31193000-31194384,31194508-31194548,31195065-31195133,
31195335-31195435,31195747-31195825,31195939-31196037,
31196119-31196187,31197609-31197658,31197749-31197925,
31198045-31198152,31198224-31198290
Length = 1132
Score = 28.3 bits (60), Expect = 8.8
Identities = 12/46 (26%), Positives = 16/46 (34%)
Frame = -3
Query: 707 PPPPPPXAXXXGXMGGGTXXXPQKXXPXXXGXGGFFXXXKXXPPPP 570
PPPPP G +GG ++ P + P PP
Sbjct: 22 PPPPPSSRKGSGGVGGNHHLHAEQRQPSASAVSSWLDSVPGRPQPP 67
>01_07_0188 -
41866689-41866763,41866889-41867155,41867277-41867722,
41867945-41868033,41868279-41868368,41868661-41868739,
41868979-41869042,41869597-41869684,41869776-41869836,
41869906-41869969,41870134-41870188,41870275-41870346,
41870469-41870551,41870629-41870724,41871279-41871383,
41872159-41872227,41872470-41872561,41872667-41872886
Length = 704
Score = 28.3 bits (60), Expect = 8.8
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +1
Query: 658 PPPIXPXXXAXGGGGGGXF 714
PPP P GGGGGG F
Sbjct: 13 PPPQHPPPPQAGGGGGGEF 31
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,339,414
Number of Sequences: 37544
Number of extensions: 443527
Number of successful extensions: 6705
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 2235
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5700
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2530383840
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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