Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP04_F_C13
(915 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0686 - 30900748-30902167,30903442-30904742 33 0.32
02_01_0458 + 3291563-3291733,3292082-3292769,3292847-3293363,329... 32 0.73
07_01_0080 + 587674-588510 31 1.3
03_03_0278 - 16126803-16129049 31 1.3
11_01_0035 - 256087-256185,256287-256430,256521-256632,256777-25... 31 1.7
03_01_0515 - 3864796-3865425 30 2.9
10_08_0638 - 19503580-19503990 29 3.9
05_07_0332 - 29332520-29332818,29333511-29333725,29334380-293344... 29 3.9
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 26 4.3
08_01_0539 + 4679392-4681282,4682060-4682104,4682403-4683560,468... 29 5.2
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330... 29 6.8
08_01_0059 - 394001-394708 29 6.8
03_06_0758 - 36052261-36052301,36052463-36052697,36052895-360529... 29 6.8
02_04_0567 - 23914330-23914461,23915016-23915136,23915954-239160... 29 6.8
12_02_0299 - 17051570-17052474,17053542-17053755 28 9.0
08_02_1256 + 25645085-25645396 28 9.0
07_03_1573 + 27829967-27830338,27830821-27831510,27831594-278317... 28 9.0
07_03_0435 + 18182657-18183509,18184477-18184574,18184663-181848... 28 9.0
07_01_0389 - 2915191-2915604,2915696-2915752,2915867-2915922,291... 28 9.0
06_02_0119 + 12040476-12041273,12042767-12042834,12042931-12042979 28 9.0
03_06_0599 + 34984869-34985319,34986581-34987563 28 9.0
01_01_0929 - 7344911-7345978 28 9.0
01_06_0823 + 32234588-32234936,32236354-32237093,32237260-322373... 25 9.3
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 33.1 bits (72), Expect = 0.32
Identities = 12/19 (63%), Positives = 12/19 (63%)
Frame = -2
Query: 716 PPXPPPPXKKKXXPPXAPP 660
PP PPPP KK PP PP
Sbjct: 364 PPPPPPPGGKKGGPPPPPP 382
Score = 28.7 bits (61), Expect = 6.8
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -2
Query: 716 PPXPPPPXKKKXXPPXAPP 660
PP PPPP PP PP
Sbjct: 313 PPPPPPPKPAAAAPPPPPP 331
>02_01_0458 +
3291563-3291733,3292082-3292769,3292847-3293363,
3293438-3293637,3294137-3294372,3294469-3295302
Length = 881
Score = 31.9 bits (69), Expect = 0.73
Identities = 12/18 (66%), Positives = 12/18 (66%)
Frame = -2
Query: 713 PXPPPPXKKKXXPPXAPP 660
P PPPP KK PP APP
Sbjct: 373 PPPPPPPIKKGAPPPAPP 390
Score = 29.9 bits (64), Expect = 2.9
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -2
Query: 725 KXXPPXPPPPXKKKXXPPXAPP 660
K PP PPPP PP PP
Sbjct: 350 KLMPPPPPPPPPPPPPPPPPPP 371
Score = 28.7 bits (61), Expect = 6.8
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -2
Query: 716 PPXPPPPXKKKXXPPXAPP 660
PP PPPP PP PP
Sbjct: 356 PPPPPPPPPPPPPPPPRPP 374
Score = 28.7 bits (61), Expect = 6.8
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -2
Query: 716 PPXPPPPXKKKXXPPXAPP 660
PP PPPP PP PP
Sbjct: 357 PPPPPPPPPPPPPPPRPPP 375
Score = 28.7 bits (61), Expect = 6.8
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -2
Query: 716 PPXPPPPXKKKXXPPXAPP 660
PP PPPP PP PP
Sbjct: 360 PPPPPPPPPPPPRPPPPPP 378
Score = 28.7 bits (61), Expect = 6.8
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -2
Query: 716 PPXPPPPXKKKXXPPXAPP 660
PP PPPP PP PP
Sbjct: 361 PPPPPPPPPPPRPPPPPPP 379
>07_01_0080 + 587674-588510
Length = 278
Score = 31.1 bits (67), Expect = 1.3
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = -2
Query: 731 FXKXXPPXPPPPXKKKXXPPXAPP 660
F + PP PPPP PP PP
Sbjct: 88 FRRPPPPPPPPPSSGSPPPPPPPP 111
>03_03_0278 - 16126803-16129049
Length = 748
Score = 31.1 bits (67), Expect = 1.3
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = -2
Query: 716 PPXPPPPXKKKXXPPXAPPXXF 651
PP PPPP ++ PP A P F
Sbjct: 186 PPPPPPPPRQAPAPPPAKPPTF 207
>11_01_0035 -
256087-256185,256287-256430,256521-256632,256777-256958,
257038-257169,257297-258589,259133-259837,260465-260549,
260604-260650,260810-260900,261838-262101,262195-262309,
262455-262570,262713-262847,262969-263036,263292-263411
Length = 1235
Score = 30.7 bits (66), Expect = 1.7
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = -2
Query: 716 PPXPPPPXKKKXXPPXAPP 660
PP PPPP K PP PP
Sbjct: 929 PPPPPPPGKPGGPPPPPPP 947
>03_01_0515 - 3864796-3865425
Length = 209
Score = 29.9 bits (64), Expect = 2.9
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = -2
Query: 716 PPXPPPPXKKKXXPPXAPP 660
PP PPPP PP +PP
Sbjct: 89 PPPPPPPAASPPPPPPSPP 107
Score = 28.7 bits (61), Expect = 6.8
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -2
Query: 716 PPXPPPPXKKKXXPPXAPP 660
PP PPPP PP PP
Sbjct: 86 PPLPPPPPPPAASPPPPPP 104
>10_08_0638 - 19503580-19503990
Length = 136
Score = 29.5 bits (63), Expect = 3.9
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = -2
Query: 713 PXPPPPXKKKXXPPXAPP 660
P PPPP +K PP PP
Sbjct: 112 PTPPPPPPRKKPPPQPPP 129
>05_07_0332 - 29332520-29332818,29333511-29333725,29334380-29334408,
29334956-29335045,29335120-29335155,29335222-29336553,
29337331-29337497,29337519-29337724,29337815-29338036,
29338332-29338381,29338754-29338870,29339471-29339551,
29339656-29339694,29340464-29340636,29340769-29340826,
29340934-29340987,29341066-29341613,29341695-29341755,
29342180-29342260,29342448-29342630,29342908-29343162,
29343304-29343423,29343497-29344901,29344988-29345085,
29345164-29345218,29345307-29345366,29346498-29346697
Length = 2077
Score = 29.5 bits (63), Expect = 3.9
Identities = 12/20 (60%), Positives = 13/20 (65%), Gaps = 1/20 (5%)
Frame = -2
Query: 716 PPXPPPPXK-KKXXPPXAPP 660
PP PPPP + K PP APP
Sbjct: 1933 PPPPPPPVEGKPKPPPHAPP 1952
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 26.2 bits (55), Expect(2) = 4.3
Identities = 9/19 (47%), Positives = 10/19 (52%)
Frame = -2
Query: 716 PPXPPPPXKKKXXPPXAPP 660
PP PPP + PP PP
Sbjct: 605 PPPPPPILPNRSVPPPPPP 623
Score = 21.4 bits (43), Expect(2) = 4.3
Identities = 7/12 (58%), Positives = 7/12 (58%)
Frame = -2
Query: 731 FXKXXPPXPPPP 696
F PP PPPP
Sbjct: 561 FSPPPPPPPPPP 572
>08_01_0539 +
4679392-4681282,4682060-4682104,4682403-4683560,
4683834-4684204,4684290-4684835,4684927-4685027,
4685117-4685933,4686025-4686213,4686313-4686384,
4686477-4686587,4686647-4686652,4686694-4686794,
4687714-4687813,4687891-4687986,4688157-4688273,
4688367-4688492,4688566-4688619,4688745-4688992,
4689087-4689195,4689284-4689583,4689799-4689963
Length = 2240
Score = 29.1 bits (62), Expect = 5.2
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -2
Query: 716 PPXPPPPXKKKXXPPXAPP 660
PP PPPP PP PP
Sbjct: 437 PPPPPPPLPPNMPPPLPPP 455
Score = 28.7 bits (61), Expect = 6.8
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -2
Query: 716 PPXPPPPXKKKXXPPXAPP 660
PP PPPP PP PP
Sbjct: 428 PPLPPPPPPPPPPPPPLPP 446
Score = 28.7 bits (61), Expect = 6.8
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -2
Query: 716 PPXPPPPXKKKXXPPXAPP 660
PP PPPP PP PP
Sbjct: 432 PPPPPPPPPPPPLPPNMPP 450
Score = 28.3 bits (60), Expect = 9.0
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -2
Query: 716 PPXPPPPXKKKXXPPXAPP 660
PP PPPP PP PP
Sbjct: 436 PPPPPPPPLPPNMPPPLPP 454
>08_01_0375 -
3307206-3307316,3307870-3307965,3308061-3308132,
3308247-3308315,3308427-3308513,3308753-3308858,
3309118-3309237,3309327-3309406,3309497-3309878,
3310746-3310814,3311460-3312202
Length = 644
Score = 28.7 bits (61), Expect = 6.8
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -2
Query: 716 PPXPPPPXKKKXXPPXAPP 660
PP PPPP PP PP
Sbjct: 108 PPPPPPPSPPPSAPPPPPP 126
>08_01_0059 - 394001-394708
Length = 235
Score = 28.7 bits (61), Expect = 6.8
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = -2
Query: 716 PPXPPPPXKKKXXPPXAPP 660
PP PPP ++ PP +PP
Sbjct: 13 PPATPPPPPRRAPPPPSPP 31
>03_06_0758 -
36052261-36052301,36052463-36052697,36052895-36052966,
36056477-36056567,36056650-36056872,36056964-36057300,
36057406-36057588
Length = 393
Score = 28.7 bits (61), Expect = 6.8
Identities = 14/39 (35%), Positives = 14/39 (35%)
Frame = -1
Query: 717 PPXSPPPXKKKXXPPXXPPXXFFXXPLFFFXXFFXPPXP 601
PP PPP P PP F PL F P P
Sbjct: 143 PPPPPPPMAVAPPPFLPPPLRPFAAPLLFHHDMASPVSP 181
Score = 28.3 bits (60), Expect = 9.0
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -2
Query: 716 PPXPPPPXKKKXXPPXAPP 660
PP PPPP PP PP
Sbjct: 142 PPPPPPPPMAVAPPPFLPP 160
>02_04_0567 -
23914330-23914461,23915016-23915136,23915954-23916048,
23916131-23916301,23917291-23917380,23917636-23918139
Length = 370
Score = 28.7 bits (61), Expect = 6.8
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -2
Query: 716 PPXPPPPXKKKXXPPXAPP 660
PP PPPP PP PP
Sbjct: 38 PPPPPPPPPPPPPPPPPPP 56
>12_02_0299 - 17051570-17052474,17053542-17053755
Length = 372
Score = 28.3 bits (60), Expect = 9.0
Identities = 18/59 (30%), Positives = 20/59 (33%)
Frame = -2
Query: 797 PPXFFFFFXXXXXLGXXXKXKXFXKXXPPXPPPPXKKKXXPPXAPPXXFXXXPXFFXXF 621
PP F F F L F PP PPPP PP + P F F +
Sbjct: 294 PPAFPFPFPQLPPLPHFPPLPSFYPSPPPPPPPP----PPPPPSFPWPFPPLAPLFPPY 348
>08_02_1256 + 25645085-25645396
Length = 103
Score = 28.3 bits (60), Expect = 9.0
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -2
Query: 716 PPXPPPPXKKKXXPPXAPP 660
PP PPPP PP PP
Sbjct: 61 PPPPPPPPPLPSPPPPPPP 79
>07_03_1573 +
27829967-27830338,27830821-27831510,27831594-27831781,
27832286-27832318,27832364-27832605,27833178-27833320,
27833649-27833825,27834104-27834256,27834639-27834694,
27834998-27835157,27835301-27835348
Length = 753
Score = 28.3 bits (60), Expect = 9.0
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = -2
Query: 713 PXPPPPXKKKXXPPXAPP 660
P PPPP ++ PP PP
Sbjct: 34 PTPPPPPPRRRTPPPPPP 51
>07_03_0435 +
18182657-18183509,18184477-18184574,18184663-18184833,
18185524-18185624,18185702-18185837,18186007-18186057,
18186202-18186489,18186610-18186844,18186924-18187204,
18187336-18187557
Length = 811
Score = 28.3 bits (60), Expect = 9.0
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -2
Query: 716 PPXPPPPXKKKXXPPXAP 663
PP PPPP PP AP
Sbjct: 79 PPPPPPPPATSRRPPRAP 96
>07_01_0389 -
2915191-2915604,2915696-2915752,2915867-2915922,
2916053-2916113,2916243-2916365,2916505-2916537,
2916617-2916709,2916839-2916934,2917025-2917203,
2917344-2917530,2918051-2918184,2918311-2918518,
2918598-2918633,2918785-2919241,2919633-2919736,
2920489-2920569,2920646-2920697,2920837-2920876,
2920991-2921085,2921241-2921383,2921899-2922006,
2922120-2922221,2922302-2922348,2922425-2922554,
2923173-2923304,2923404-2923616,2923709-2923963,
2924053-2924799
Length = 1460
Score = 28.3 bits (60), Expect = 9.0
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -2
Query: 716 PPXPPPPXKKKXXPPXAP 663
PP PPPP PP AP
Sbjct: 9 PPQPPPPPSPPNPPPRAP 26
>06_02_0119 + 12040476-12041273,12042767-12042834,12042931-12042979
Length = 304
Score = 28.3 bits (60), Expect = 9.0
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -2
Query: 716 PPXPPPPXKKKXXPPXAPP 660
PP PPPP K PP P
Sbjct: 56 PPPPPPPQPAKEPPPPTKP 74
>03_06_0599 + 34984869-34985319,34986581-34987563
Length = 477
Score = 28.3 bits (60), Expect = 9.0
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = -2
Query: 716 PPXPPPPXKKKXXPPXAPP 660
PP PPPP ++ P +PP
Sbjct: 405 PPPPPPPPHQRETPSPSPP 423
Score = 28.3 bits (60), Expect = 9.0
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = -2
Query: 716 PPXPPPPXKKKXXPPXAPP 660
PP PPPP +++ P PP
Sbjct: 406 PPPPPPPHQRETPSPSPPP 424
>01_01_0929 - 7344911-7345978
Length = 355
Score = 28.3 bits (60), Expect = 9.0
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -2
Query: 716 PPXPPPPXKKKXXPPXAPP 660
PP PP P K PP PP
Sbjct: 20 PPLPPSPPSKTRRPPPPPP 38
>01_06_0823 + 32234588-32234936,32236354-32237093,32237260-32237343,
32237909-32239263,32240399-32240460,32240544-32241144,
32241229-32241310,32241778-32241840
Length = 1111
Score = 24.6 bits (51), Expect(2) = 9.3
Identities = 9/19 (47%), Positives = 9/19 (47%)
Frame = -2
Query: 716 PPXPPPPXKKKXXPPXAPP 660
PP P PP PP PP
Sbjct: 985 PPPPSPPPLPITQPPSVPP 1003
Score = 21.8 bits (44), Expect(2) = 9.3
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = -2
Query: 725 KXXPPXPPPP 696
K PP PPPP
Sbjct: 962 KRPPPPPPPP 971
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,259,328
Number of Sequences: 37544
Number of extensions: 158895
Number of successful extensions: 4255
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1295
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3064
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2600672280
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -