Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP04_F_C06
(888 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U13070-3|AAM22058.1| 429|Caenorhabditis elegans Chaperonin cont... 232 2e-61
U13070-2|AAC46642.1| 539|Caenorhabditis elegans Chaperonin cont... 232 2e-61
Z35599-3|CAA84660.1| 542|Caenorhabditis elegans Hypothetical pr... 113 1e-25
Z32840-7|CAA83681.1| 542|Caenorhabditis elegans Hypothetical pr... 113 1e-25
U25698-1|AAA92843.1| 542|Caenorhabditis elegans CCT-5 protein. 113 1e-25
Z49068-8|CAA88861.1| 540|Caenorhabditis elegans Hypothetical pr... 105 4e-23
U25697-1|AAA92842.1| 540|Caenorhabditis elegans CCT-4 protein. 105 4e-23
Z66500-12|CAA91308.1| 549|Caenorhabditis elegans Hypothetical p... 94 1e-19
U07941-1|AAB05072.1| 549|Caenorhabditis elegans CCT-1 protein. 94 1e-19
Z68318-10|CAA92697.1| 529|Caenorhabditis elegans Hypothetical p... 88 7e-18
U25632-1|AAA93233.1| 529|Caenorhabditis elegans CCT-2 protein. 88 7e-18
AL031268-2|CAA20331.1| 529|Caenorhabditis elegans Hypothetical ... 88 7e-18
AC024136-4|AAF35963.3| 543|Caenorhabditis elegans Hypothetical ... 82 6e-16
AF067947-11|AAO25994.1| 455|Caenorhabditis elegans Hypothetical... 79 3e-15
AF067947-10|AAC19232.2| 535|Caenorhabditis elegans Hypothetical... 79 3e-15
AC024827-1|AAF60806.2| 581|Caenorhabditis elegans Hypothetical ... 70 2e-12
Z32840-6|CAD01079.1| 336|Caenorhabditis elegans Hypothetical pr... 40 0.003
L36035-1|AAA28077.1| 568|Caenorhabditis elegans HSP60 protein. 31 0.83
AC084153-6|AAK84594.1| 568|Caenorhabditis elegans Heat shock pr... 31 0.83
Z50795-6|CAD59152.2| 707|Caenorhabditis elegans Hypothetical pr... 31 1.5
Z50795-5|CAA90665.2| 705|Caenorhabditis elegans Hypothetical pr... 31 1.5
Z72517-8|CAA96697.2| 1883|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z72503-12|CAA96600.2| 1883|Caenorhabditis elegans Hypothetical p... 29 3.4
>U13070-3|AAM22058.1| 429|Caenorhabditis elegans Chaperonin
containing tcp-1 protein6, isoform b protein.
Length = 429
Score = 232 bits (568), Expect = 2e-61
Identities = 116/190 (61%), Positives = 141/190 (74%)
Frame = +2
Query: 182 MAAISLLNPKAEFARAAQALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDG 361
M++I LNPKAE AR A AL +NIS A+G+QDVM++NLGPKGT+KMLVSGAGDIK+TKDG
Sbjct: 1 MSSIQCLNPKAELARHAAALELNISGARGLQDVMRSNLGPKGTLKMLVSGAGDIKLTKDG 60
Query: 362 NVLLHEMQIQHPTASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIIT 541
NVLLHEM IQHPTAS+IA+ VLLIGELLKQA+ + EGLHPRI+T
Sbjct: 61 NVLLHEMAIQHPTASMIAKASTAQDDVTGDGTTSTVLLIGELLKQAESLVLEGLHPRIVT 120
Query: 542 EGFDIARNKSLEVLESMKIPIEVARENLVDVARTSLKTKVHPSLADVLTDACVDAVLTIR 721
EGF+ A K+LE+LE K V R+ LV+V RT+L+TK+H LAD +T+ VDAVL IR
Sbjct: 121 EGFEWANTKTLELLEKFKKEAPVERDLLVEVCRTALRTKLHQKLADHITECVVDAVLAIR 180
Query: 722 TPGKPVDLHM 751
G+ DLHM
Sbjct: 181 RDGEEPDLHM 190
Score = 72.9 bits (171), Expect = 3e-13
Identities = 31/45 (68%), Positives = 38/45 (84%)
Frame = +3
Query: 753 VEIMEMKHKTATETVLVKGLVMDHGARHPDMPKRVENAYILTCNV 887
VE MEM H + +T LV+GLV+DHGARHPDMP+ V++AYILTCNV
Sbjct: 191 VEKMEMHHDSDMDTTLVRGLVLDHGARHPDMPRHVKDAYILTCNV 235
>U13070-2|AAC46642.1| 539|Caenorhabditis elegans Chaperonin
containing tcp-1 protein6, isoform a protein.
Length = 539
Score = 232 bits (568), Expect = 2e-61
Identities = 116/190 (61%), Positives = 141/190 (74%)
Frame = +2
Query: 182 MAAISLLNPKAEFARAAQALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDG 361
M++I LNPKAE AR A AL +NIS A+G+QDVM++NLGPKGT+KMLVSGAGDIK+TKDG
Sbjct: 1 MSSIQCLNPKAELARHAAALELNISGARGLQDVMRSNLGPKGTLKMLVSGAGDIKLTKDG 60
Query: 362 NVLLHEMQIQHPTASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIIT 541
NVLLHEM IQHPTAS+IA+ VLLIGELLKQA+ + EGLHPRI+T
Sbjct: 61 NVLLHEMAIQHPTASMIAKASTAQDDVTGDGTTSTVLLIGELLKQAESLVLEGLHPRIVT 120
Query: 542 EGFDIARNKSLEVLESMKIPIEVARENLVDVARTSLKTKVHPSLADVLTDACVDAVLTIR 721
EGF+ A K+LE+LE K V R+ LV+V RT+L+TK+H LAD +T+ VDAVL IR
Sbjct: 121 EGFEWANTKTLELLEKFKKEAPVERDLLVEVCRTALRTKLHQKLADHITECVVDAVLAIR 180
Query: 722 TPGKPVDLHM 751
G+ DLHM
Sbjct: 181 RDGEEPDLHM 190
Score = 72.9 bits (171), Expect = 3e-13
Identities = 31/45 (68%), Positives = 38/45 (84%)
Frame = +3
Query: 753 VEIMEMKHKTATETVLVKGLVMDHGARHPDMPKRVENAYILTCNV 887
VE MEM H + +T LV+GLV+DHGARHPDMP+ V++AYILTCNV
Sbjct: 191 VEKMEMHHDSDMDTTLVRGLVLDHGARHPDMPRHVKDAYILTCNV 235
>Z35599-3|CAA84660.1| 542|Caenorhabditis elegans Hypothetical
protein C07G2.3a protein.
Length = 542
Score = 113 bits (273), Expect = 1e-25
Identities = 62/164 (37%), Positives = 96/164 (58%), Gaps = 2/164 (1%)
Frame = +2
Query: 233 QALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVLLHEMQIQHPTASLI 412
+A+ +I AA+ + + ++T+LGP+G KMLVS GD+ IT DG ++ +M +QH A L+
Sbjct: 33 EAVKSHILAARAVANTLRTSLGPRGLDKMLVSPDGDVTITNDGATIMEKMDVQHHVAKLM 92
Query: 413 ARXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIITEGFDIARNKSLEVLESM 592
V+L G LL++A+ I G+HP I +GFD+A K+LE L+S+
Sbjct: 93 VELSKSQDHEIGDGTTGVVVLAGALLEEAEKLIDRGIHPIKIADGFDLACKKALETLDSI 152
Query: 593 --KIPIEVARENLVDVARTSLKTKVHPSLADVLTDACVDAVLTI 718
K P+E RE LV+ A+TSL +K+ + VDAVL++
Sbjct: 153 SDKFPVE-NRERLVETAQTSLGSKIVNRSLRQFAEIAVDAVLSV 195
Score = 39.9 bits (89), Expect = 0.002
Identities = 21/47 (44%), Positives = 31/47 (65%), Gaps = 5/47 (10%)
Frame = +3
Query: 756 EIMEMKHKTA---TETVLVKGLVMDHGARHPDMPKRVENA--YILTC 881
E+++M+ K +T+LVKG+V+D HP MPK ++NA ILTC
Sbjct: 206 EMIKMEGKVGGRLEDTILVKGIVIDKTMSHPQMPKELKNAKVAILTC 252
>Z32840-7|CAA83681.1| 542|Caenorhabditis elegans Hypothetical
protein C07G2.3a protein.
Length = 542
Score = 113 bits (273), Expect = 1e-25
Identities = 62/164 (37%), Positives = 96/164 (58%), Gaps = 2/164 (1%)
Frame = +2
Query: 233 QALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVLLHEMQIQHPTASLI 412
+A+ +I AA+ + + ++T+LGP+G KMLVS GD+ IT DG ++ +M +QH A L+
Sbjct: 33 EAVKSHILAARAVANTLRTSLGPRGLDKMLVSPDGDVTITNDGATIMEKMDVQHHVAKLM 92
Query: 413 ARXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIITEGFDIARNKSLEVLESM 592
V+L G LL++A+ I G+HP I +GFD+A K+LE L+S+
Sbjct: 93 VELSKSQDHEIGDGTTGVVVLAGALLEEAEKLIDRGIHPIKIADGFDLACKKALETLDSI 152
Query: 593 --KIPIEVARENLVDVARTSLKTKVHPSLADVLTDACVDAVLTI 718
K P+E RE LV+ A+TSL +K+ + VDAVL++
Sbjct: 153 SDKFPVE-NRERLVETAQTSLGSKIVNRSLRQFAEIAVDAVLSV 195
Score = 39.9 bits (89), Expect = 0.002
Identities = 21/47 (44%), Positives = 31/47 (65%), Gaps = 5/47 (10%)
Frame = +3
Query: 756 EIMEMKHKTA---TETVLVKGLVMDHGARHPDMPKRVENA--YILTC 881
E+++M+ K +T+LVKG+V+D HP MPK ++NA ILTC
Sbjct: 206 EMIKMEGKVGGRLEDTILVKGIVIDKTMSHPQMPKELKNAKVAILTC 252
>U25698-1|AAA92843.1| 542|Caenorhabditis elegans CCT-5 protein.
Length = 542
Score = 113 bits (273), Expect = 1e-25
Identities = 62/164 (37%), Positives = 96/164 (58%), Gaps = 2/164 (1%)
Frame = +2
Query: 233 QALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVLLHEMQIQHPTASLI 412
+A+ +I AA+ + + ++T+LGP+G KMLVS GD+ IT DG ++ +M +QH A L+
Sbjct: 33 EAVKSHILAARAVANTLRTSLGPRGLDKMLVSPDGDVTITNDGATIMEKMDVQHHVAKLM 92
Query: 413 ARXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIITEGFDIARNKSLEVLESM 592
V+L G LL++A+ I G+HP I +GFD+A K+LE L+S+
Sbjct: 93 VELSKSQDHEIGDGTTGVVVLAGALLEEAEKLIDRGIHPIKIADGFDLACKKALETLDSI 152
Query: 593 --KIPIEVARENLVDVARTSLKTKVHPSLADVLTDACVDAVLTI 718
K P+E RE LV+ A+TSL +K+ + VDAVL++
Sbjct: 153 SDKFPVE-NRERLVETAQTSLGSKIVNRSLRQFAEIAVDAVLSV 195
Score = 39.9 bits (89), Expect = 0.002
Identities = 21/47 (44%), Positives = 31/47 (65%), Gaps = 5/47 (10%)
Frame = +3
Query: 756 EIMEMKHKTA---TETVLVKGLVMDHGARHPDMPKRVENA--YILTC 881
E+++M+ K +T+LVKG+V+D HP MPK ++NA ILTC
Sbjct: 206 EMIKMEGKVGGRLEDTILVKGIVIDKTMSHPQMPKELKNAKVAILTC 252
>Z49068-8|CAA88861.1| 540|Caenorhabditis elegans Hypothetical
protein K01C8.10 protein.
Length = 540
Score = 105 bits (252), Expect = 4e-23
Identities = 55/158 (34%), Positives = 91/158 (57%), Gaps = 1/158 (0%)
Frame = +2
Query: 248 NISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVLLHEMQIQHPTASLIARXXX 427
NI AAK + D ++T+LGP+G KM+ SG GD+ IT DG +L++M + HPTA ++
Sbjct: 36 NIVAAKAVADAVRTSLGPRGMDKMIQSGNGDVTITNDGATILNQMSVIHPTAKMLVELSK 95
Query: 428 XXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIITEGFDIARNKSLEVLESMKIPIE 607
V++ G LL A +S+G+HP I+E F A ++ ++L+ M P++
Sbjct: 96 AQDIEAGDGTTTVVVMAGALLDAAQNLLSKGIHPTTISESFQSAAAEAEKILDEMSSPVD 155
Query: 608 VARENLVD-VARTSLKTKVHPSLADVLTDACVDAVLTI 718
++ + L++ +A TSL +KV + +L V+AV I
Sbjct: 156 LSNDALLNKMATTSLNSKVVSQHSWLLAPMAVNAVKKI 193
>U25697-1|AAA92842.1| 540|Caenorhabditis elegans CCT-4 protein.
Length = 540
Score = 105 bits (252), Expect = 4e-23
Identities = 55/158 (34%), Positives = 91/158 (57%), Gaps = 1/158 (0%)
Frame = +2
Query: 248 NISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVLLHEMQIQHPTASLIARXXX 427
NI AAK + D ++T+LGP+G KM+ SG GD+ IT DG +L++M + HPTA ++
Sbjct: 36 NIVAAKAVADAVRTSLGPRGMDKMIQSGNGDVTITNDGATILNQMSVIHPTAKMLVELSK 95
Query: 428 XXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIITEGFDIARNKSLEVLESMKIPIE 607
V++ G LL A +S+G+HP I+E F A ++ ++L+ M P++
Sbjct: 96 AQDIEAGDGTTTVVVMAGALLDAAQNLLSKGIHPTTISESFQSAAAEAEKILDEMSSPVD 155
Query: 608 VARENLVD-VARTSLKTKVHPSLADVLTDACVDAVLTI 718
++ + L++ +A TSL +KV + +L V+AV I
Sbjct: 156 LSNDALLNKMATTSLNSKVVSQHSWLLAPMAVNAVKKI 193
>Z66500-12|CAA91308.1| 549|Caenorhabditis elegans Hypothetical
protein T05C12.7 protein.
Length = 549
Score = 93.9 bits (223), Expect = 1e-19
Identities = 46/160 (28%), Positives = 90/160 (56%), Gaps = 2/160 (1%)
Frame = +2
Query: 248 NISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVLLHEMQIQHPTASLIARXXX 427
N++AA I +++K++LGP G KMLV GD+ +T DG +L +++++HP ++
Sbjct: 25 NVTAAVAIANIVKSSLGPVGLDKMLVDDVGDVIVTNDGATILKQLEVEHPAGKVLVELAQ 84
Query: 428 XXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIITEGFDIARNKSLE-VLESMKIPI 604
V++ ELLK+AD + + +HP I G+ +A ++++ + E++
Sbjct: 85 LQDEEVGDGTTSVVIVAAELLKRADELVKQKVHPTTIINGYRLACKEAVKYISENISFTS 144
Query: 605 E-VARENLVDVARTSLKTKVHPSLADVLTDACVDAVLTIR 721
+ + R+++V+ A+TS+ +K+ AD + VDA +R
Sbjct: 145 DSIGRQSVVNAAKTSMSSKIIGPDADFFGELVVDAAEAVR 184
Score = 31.9 bits (69), Expect = 0.63
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = +3
Query: 753 VEIMEMKHKTATETVLVKGLVMDHGARHPDMPKRVENAYI 872
V +++ K+A E+VLVKG ++ MP RV+NA I
Sbjct: 198 VNVLKAHGKSARESVLVKGYALNCTVASQAMPLRVQNAKI 237
>U07941-1|AAB05072.1| 549|Caenorhabditis elegans CCT-1 protein.
Length = 549
Score = 93.9 bits (223), Expect = 1e-19
Identities = 46/160 (28%), Positives = 90/160 (56%), Gaps = 2/160 (1%)
Frame = +2
Query: 248 NISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVLLHEMQIQHPTASLIARXXX 427
N++AA I +++K++LGP G KMLV GD+ +T DG +L +++++HP ++
Sbjct: 25 NVTAAVAIANIVKSSLGPVGLDKMLVDDVGDVIVTNDGATILKQLEVEHPAGKVLVELAQ 84
Query: 428 XXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIITEGFDIARNKSLE-VLESMKIPI 604
V++ ELLK+AD + + +HP I G+ +A ++++ + E++
Sbjct: 85 LQDEEVGDGTTSVVIVAAELLKRADELVKQKVHPTTIINGYRLACKEAVKYISENISFTS 144
Query: 605 E-VARENLVDVARTSLKTKVHPSLADVLTDACVDAVLTIR 721
+ + R+++V+ A+TS+ +K+ AD + VDA +R
Sbjct: 145 DSIGRQSVVNAAKTSMSSKIIGPDADFFGELVVDAAEAVR 184
Score = 31.9 bits (69), Expect = 0.63
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = +3
Query: 753 VEIMEMKHKTATETVLVKGLVMDHGARHPDMPKRVENAYI 872
V +++ K+A E+VLVKG ++ MP RV+NA I
Sbjct: 198 VNVLKAHGKSARESVLVKGYALNCTVASQAMPLRVQNAKI 237
>Z68318-10|CAA92697.1| 529|Caenorhabditis elegans Hypothetical
protein T21B10.7 protein.
Length = 529
Score = 88.2 bits (209), Expect = 7e-18
Identities = 55/188 (29%), Positives = 93/188 (49%), Gaps = 5/188 (2%)
Frame = +2
Query: 182 MAAISLLNPKAEFARAAQALAVNISAAKGIQDVMKTNLGPKGTMKMLVSG----AGDIKI 349
M + +L A+ R A + A I D++K+ LGPKG K+L+SG AG IK+
Sbjct: 1 MLPVQILKDNAQEERGESARLSSFVGAIAIGDLVKSTLGPKGMDKILISGNPESAGGIKV 60
Query: 350 TKDGNVLLHEMQIQHPTASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHP 529
T DG +L + + +P A ++ +L ELLK+A+ +++ +HP
Sbjct: 61 TNDGATILKSIGVDNPAAKVLVDMSMTQDHEVGDGTTSVTVLAAELLKEAEKLVNQRIHP 120
Query: 530 RIITEGFDIARNKSLEVLESMKIPI-EVARENLVDVARTSLKTKVHPSLADVLTDACVDA 706
+ I G+ A + E L+ I + R++L+ +ART+L +K+ + VDA
Sbjct: 121 QTIISGYRRALGIAQESLKKSSIESGDNIRDDLLKIARTTLGSKILSQHKEHFAQLAVDA 180
Query: 707 VLTIRTPG 730
VL ++ G
Sbjct: 181 VLRLKGSG 188
>U25632-1|AAA93233.1| 529|Caenorhabditis elegans CCT-2 protein.
Length = 529
Score = 88.2 bits (209), Expect = 7e-18
Identities = 55/188 (29%), Positives = 93/188 (49%), Gaps = 5/188 (2%)
Frame = +2
Query: 182 MAAISLLNPKAEFARAAQALAVNISAAKGIQDVMKTNLGPKGTMKMLVSG----AGDIKI 349
M + +L A+ R A + A I D++K+ LGPKG K+L+SG AG IK+
Sbjct: 1 MLPVQILKDNAQEERGESARLSSFVGAIAIGDLVKSTLGPKGMDKILISGNPESAGGIKV 60
Query: 350 TKDGNVLLHEMQIQHPTASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHP 529
T DG +L + + +P A ++ +L ELLK+A+ +++ +HP
Sbjct: 61 TNDGATILKSIGVDNPAAKVLVDMSMTQDHEVGDGTTSVTVLAAELLKEAEKLVNQRIHP 120
Query: 530 RIITEGFDIARNKSLEVLESMKIPI-EVARENLVDVARTSLKTKVHPSLADVLTDACVDA 706
+ I G+ A + E L+ I + R++L+ +ART+L +K+ + VDA
Sbjct: 121 QTIISGYRRALGIAQESLKKSSIESGDNIRDDLLKIARTTLGSKILSQHKEHFAQLAVDA 180
Query: 707 VLTIRTPG 730
VL ++ G
Sbjct: 181 VLRLKGSG 188
>AL031268-2|CAA20331.1| 529|Caenorhabditis elegans Hypothetical
protein T21B10.7 protein.
Length = 529
Score = 88.2 bits (209), Expect = 7e-18
Identities = 55/188 (29%), Positives = 93/188 (49%), Gaps = 5/188 (2%)
Frame = +2
Query: 182 MAAISLLNPKAEFARAAQALAVNISAAKGIQDVMKTNLGPKGTMKMLVSG----AGDIKI 349
M + +L A+ R A + A I D++K+ LGPKG K+L+SG AG IK+
Sbjct: 1 MLPVQILKDNAQEERGESARLSSFVGAIAIGDLVKSTLGPKGMDKILISGNPESAGGIKV 60
Query: 350 TKDGNVLLHEMQIQHPTASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHP 529
T DG +L + + +P A ++ +L ELLK+A+ +++ +HP
Sbjct: 61 TNDGATILKSIGVDNPAAKVLVDMSMTQDHEVGDGTTSVTVLAAELLKEAEKLVNQRIHP 120
Query: 530 RIITEGFDIARNKSLEVLESMKIPI-EVARENLVDVARTSLKTKVHPSLADVLTDACVDA 706
+ I G+ A + E L+ I + R++L+ +ART+L +K+ + VDA
Sbjct: 121 QTIISGYRRALGIAQESLKKSSIESGDNIRDDLLKIARTTLGSKILSQHKEHFAQLAVDA 180
Query: 707 VLTIRTPG 730
VL ++ G
Sbjct: 181 VLRLKGSG 188
>AC024136-4|AAF35963.3| 543|Caenorhabditis elegans Hypothetical
protein F54A3.3 protein.
Length = 543
Score = 81.8 bits (193), Expect = 6e-16
Identities = 44/160 (27%), Positives = 81/160 (50%), Gaps = 2/160 (1%)
Frame = +2
Query: 248 NISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVLLHEMQIQHPTASLIARXXX 427
NI+A K I DV++T+LGP+ +KML+ G I +T DGN +L E+ ++HP A +
Sbjct: 28 NINACKTIADVIRTSLGPRAMLKMLMDPMGGIVMTNDGNAILREITVKHPAAKSMIEIAR 87
Query: 428 XXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIITEGFDIARNKSLEVLES-MKIPI 604
++L GE++ A ++ + HP +I + + A ++ E+ +
Sbjct: 88 TQDEETGDGTTSVIILAGEVMAHAQTYLEQKTHPTLIIKAYRQALEDMIQWSENKFSKTV 147
Query: 605 EVARE-NLVDVARTSLKTKVHPSLADVLTDACVDAVLTIR 721
++ + + V ++ L TK+ D+ + + AV TIR
Sbjct: 148 DITDDAEIAKVVKSCLGTKMISKWMDLAVNISIQAVKTIR 187
>AF067947-11|AAO25994.1| 455|Caenorhabditis elegans Hypothetical
protein T10B5.5b protein.
Length = 455
Score = 79.4 bits (187), Expect = 3e-15
Identities = 54/179 (30%), Positives = 84/179 (46%), Gaps = 3/179 (1%)
Frame = +2
Query: 191 ISLLNPKAEFARAAQALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVL 370
I LL E + + NI+A + + D ++T LGP+G K++V G I+ DG +
Sbjct: 6 IILLKDGTENKQGKGQIISNINACQVVADSIRTTLGPRGLDKLIVDSKGATTISNDGATI 65
Query: 371 LHEMQIQHPTASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIITEGF 550
L + I P AS + V+L E+LKQ FI +G+HP+++
Sbjct: 66 LKLLDIVFPAASTMVDIARSQDAEVGDGTTSVVVLAAEILKQMKPFIEDGVHPQLLIRAI 125
Query: 551 DIARNKSLEVLESMKIPIE---VARENLVDVARTSLKTKVHPSLADVLTDACVDAVLTI 718
A K+L+ L ++I I RE LV A T+L +K+ + VDAV T+
Sbjct: 126 GKACEKTLKNLADLEIKINGETELREMLVKCAATTLSSKLVSQERLFFANMIVDAVNTL 184
>AF067947-10|AAC19232.2| 535|Caenorhabditis elegans Hypothetical
protein T10B5.5a protein.
Length = 535
Score = 79.4 bits (187), Expect = 3e-15
Identities = 54/179 (30%), Positives = 84/179 (46%), Gaps = 3/179 (1%)
Frame = +2
Query: 191 ISLLNPKAEFARAAQALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVL 370
I LL E + + NI+A + + D ++T LGP+G K++V G I+ DG +
Sbjct: 6 IILLKDGTENKQGKGQIISNINACQVVADSIRTTLGPRGLDKLIVDSKGATTISNDGATI 65
Query: 371 LHEMQIQHPTASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIITEGF 550
L + I P AS + V+L E+LKQ FI +G+HP+++
Sbjct: 66 LKLLDIVFPAASTMVDIARSQDAEVGDGTTSVVVLAAEILKQMKPFIEDGVHPQLLIRAI 125
Query: 551 DIARNKSLEVLESMKIPIE---VARENLVDVARTSLKTKVHPSLADVLTDACVDAVLTI 718
A K+L+ L ++I I RE LV A T+L +K+ + VDAV T+
Sbjct: 126 GKACEKTLKNLADLEIKINGETELREMLVKCAATTLSSKLVSQERLFFANMIVDAVNTL 184
>AC024827-1|AAF60806.2| 581|Caenorhabditis elegans Hypothetical
protein Y55F3AR.3 protein.
Length = 581
Score = 70.1 bits (164), Expect = 2e-12
Identities = 43/167 (25%), Positives = 82/167 (49%), Gaps = 6/167 (3%)
Frame = +2
Query: 218 FARAAQALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVLLHEMQIQHP 397
F +A+ NI A + +++ GP G KM+++ + +T D +L E++IQHP
Sbjct: 21 FKGTDEAVQRNIEACTELASQIRSAYGPNGMNKMVINHIEKLFVTNDAATILKELEIQHP 80
Query: 398 TASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIITEGFDIARNKSLE 577
A +I V+L LL+ A I G+ P+ + G++ A K+LE
Sbjct: 81 AARIIIMATEMQEKQIGDNTNTVVILAAALLEHAANLIHMGMTPQEVAAGYEQAAEKALE 140
Query: 578 VLESMKIPIEVARENLVDV---ARTSLKTKVHPS---LADVLTDACV 700
+L ++ + +N+ +V R+++ +K + + +AD++ ACV
Sbjct: 141 ILPTLVVKEATDMKNIEEVRQYIRSAITSKQYDNEDIIADLVAKACV 187
>Z32840-6|CAD01079.1| 336|Caenorhabditis elegans Hypothetical
protein C07G2.3b protein.
Length = 336
Score = 39.5 bits (88), Expect = 0.003
Identities = 18/33 (54%), Positives = 24/33 (72%), Gaps = 2/33 (6%)
Frame = +3
Query: 789 ETVLVKGLVMDHGARHPDMPKRVENA--YILTC 881
+T+LVKG+V+D HP MPK ++NA ILTC
Sbjct: 14 DTILVKGIVIDKTMSHPQMPKELKNAKVAILTC 46
>L36035-1|AAA28077.1| 568|Caenorhabditis elegans HSP60 protein.
Length = 568
Score = 31.5 bits (68), Expect = 0.83
Identities = 18/66 (27%), Positives = 32/66 (48%)
Frame = +2
Query: 221 ARAAQALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVLLHEMQIQHPT 400
A QA+ V ++ + D + +GPKG ++ G KITKDG + + ++
Sbjct: 25 AEGRQAMLVGVNL---LADAVSVTMGPKGRNVIIEQSWGSPKITKDGVTVAKSIDLKDKY 81
Query: 401 ASLIAR 418
+L A+
Sbjct: 82 QNLGAK 87
>AC084153-6|AAK84594.1| 568|Caenorhabditis elegans Heat shock
protein protein 60 protein.
Length = 568
Score = 31.5 bits (68), Expect = 0.83
Identities = 18/66 (27%), Positives = 32/66 (48%)
Frame = +2
Query: 221 ARAAQALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVLLHEMQIQHPT 400
A QA+ V ++ + D + +GPKG ++ G KITKDG + + ++
Sbjct: 25 AEGRQAMLVGVNL---LADAVSVTMGPKGRNVIIEQSWGSPKITKDGVTVAKSIDLKDKY 81
Query: 401 ASLIAR 418
+L A+
Sbjct: 82 QNLGAK 87
>Z50795-6|CAD59152.2| 707|Caenorhabditis elegans Hypothetical
protein R166.5b protein.
Length = 707
Score = 30.7 bits (66), Expect = 1.5
Identities = 17/51 (33%), Positives = 28/51 (54%)
Frame = -1
Query: 621 FSRATSIGIFIDSKTSNDLLRAMSKPSVMILGCKPSLMNMSACLSSSPMRR 469
F R S+GI I+ S + +S+ S PS++N+S L+ SP++R
Sbjct: 575 FPRKKSVGIAIEKSRSGEFTPPISRASPTTP--PPSMLNLSEDLTDSPVKR 623
>Z50795-5|CAA90665.2| 705|Caenorhabditis elegans Hypothetical
protein R166.5a protein.
Length = 705
Score = 30.7 bits (66), Expect = 1.5
Identities = 17/51 (33%), Positives = 28/51 (54%)
Frame = -1
Query: 621 FSRATSIGIFIDSKTSNDLLRAMSKPSVMILGCKPSLMNMSACLSSSPMRR 469
F R S+GI I+ S + +S+ S PS++N+S L+ SP++R
Sbjct: 573 FPRKKSVGIAIEKSRSGEFTPPISRASPTTP--PPSMLNLSEDLTDSPVKR 621
>Z72517-8|CAA96697.2| 1883|Caenorhabditis elegans Hypothetical protein
C26C6.1a protein.
Length = 1883
Score = 29.5 bits (63), Expect = 3.4
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = -1
Query: 210 LGFNKLMAAISFNTFSVSINHEETLSYKPISKMDHKILP 94
L + K M + + VSI +EE L YK KMD ++ P
Sbjct: 1339 LDYGKAMRKMKAHKLHVSIPNEEVLFYKQPIKMDKELSP 1377
>Z72503-12|CAA96600.2| 1883|Caenorhabditis elegans Hypothetical
protein C26C6.1a protein.
Length = 1883
Score = 29.5 bits (63), Expect = 3.4
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = -1
Query: 210 LGFNKLMAAISFNTFSVSINHEETLSYKPISKMDHKILP 94
L + K M + + VSI +EE L YK KMD ++ P
Sbjct: 1339 LDYGKAMRKMKAHKLHVSIPNEEVLFYKQPIKMDKELSP 1377
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,422,425
Number of Sequences: 27780
Number of extensions: 393759
Number of successful extensions: 882
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 825
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 858
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2244863852
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -