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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP04_F_C03
         (975 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||...    38   0.003
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1...    34   0.026
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac...    31   0.25 
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe...    30   0.57 
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual    30   0.57 
SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein Cap1|S...    29   1.3  
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M...    28   2.3  
SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr 2...    27   3.0  
SPBC557.04 |ppk29||Ark1/Prk1 family protein kinase Ppk29|Schizos...    23   3.9  
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit...    27   4.0  
SPBC13E7.03c |||RNA hairpin binding protein |Schizosaccharomyces...    27   4.0  
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch...    27   5.3  
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ...    27   5.3  
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1...    27   5.3  

>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
           3|||Manual
          Length = 1461

 Score = 37.5 bits (83), Expect = 0.003
 Identities = 14/28 (50%), Positives = 14/28 (50%)
 Frame = +1

Query: 514 PPPPEKKXXXXXXGXPPPPPPPPXXXGG 597
           PPPP         G PPPPPPPP    G
Sbjct: 761 PPPPPPPPGVAGAGPPPPPPPPPAVSAG 788



 Score = 37.1 bits (82), Expect = 0.004
 Identities = 15/29 (51%), Positives = 15/29 (51%)
 Frame = -3

Query: 700 PPLFFXGGXFXXPPPGGXXGGXPPPPPXP 614
           PP    GG    PPP G  G  PPPPP P
Sbjct: 753 PPAPIMGGPPPPPPPPGVAGAGPPPPPPP 781



 Score = 34.7 bits (76), Expect = 0.020
 Identities = 13/25 (52%), Positives = 13/25 (52%)
 Frame = -3

Query: 664 PPPGGXXGGXPPPPPXPXXXXXPPP 590
           PPP    GG PPPPP P      PP
Sbjct: 752 PPPAPIMGGPPPPPPPPGVAGAGPP 776



 Score = 33.5 bits (73), Expect = 0.046
 Identities = 13/28 (46%), Positives = 13/28 (46%)
 Frame = +1

Query: 514 PPPPEKKXXXXXXGXPPPPPPPPXXXGG 597
           PPPP           PPPPPPP    GG
Sbjct: 762 PPPPPPPGVAGAGPPPPPPPPPAVSAGG 789



 Score = 32.3 bits (70), Expect = 0.11
 Identities = 11/17 (64%), Positives = 11/17 (64%)
 Frame = +1

Query: 553 GXPPPPPPPPXXXGGXP 603
           G PPPPPPPP   G  P
Sbjct: 759 GGPPPPPPPPGVAGAGP 775



 Score = 29.1 bits (62), Expect = 0.99
 Identities = 12/29 (41%), Positives = 12/29 (41%)
 Frame = +1

Query: 517 PPPEKKXXXXXXGXPPPPPPPPXXXGGXP 603
           P P         G PPPPPPP     G P
Sbjct: 748 PIPVPPPAPIMGGPPPPPPPPGVAGAGPP 776



 Score = 27.9 bits (59), Expect = 2.3
 Identities = 12/30 (40%), Positives = 12/30 (40%)
 Frame = +1

Query: 514 PPPPEKKXXXXXXGXPPPPPPPPXXXGGXP 603
           PPPP           P P PPP    GG P
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPP 762



 Score = 26.6 bits (56), Expect = 5.3
 Identities = 15/51 (29%), Positives = 15/51 (29%)
 Frame = +1

Query: 724 LFXXXPPXXPPPXKKXXPPPXXXKKKXXAPPPXXKKKXXXPPXKKXGGPPP 876
           L    PP  PP      P P        AP          PP     GPPP
Sbjct: 727 LLLKSPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPP 777



 Score = 26.2 bits (55), Expect = 7.0
 Identities = 17/57 (29%), Positives = 17/57 (29%)
 Frame = +1

Query: 763 KKXXPPPXXXKKKXXAPPPXXKKKXXXPPXKKXGGPPPXXKKXXXXXPXKKXPPXXP 933
           K   PPP        AP P        PP    GGPPP              PP  P
Sbjct: 730 KSPPPPPPAVIVPTPAPAPIP----VPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782



 Score = 26.2 bits (55), Expect = 7.0
 Identities = 10/19 (52%), Positives = 10/19 (52%)
 Frame = -2

Query: 482 PPPPPXPPXP*KKKXXPPP 426
           PPPPP PP        PPP
Sbjct: 761 PPPPPPPPGVAGAGPPPPP 779


>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 574

 Score = 34.3 bits (75), Expect = 0.026
 Identities = 18/67 (26%), Positives = 22/67 (32%), Gaps = 2/67 (2%)
 Frame = +3

Query: 639 PPXXPPGGGKXKXPPXKKRGGXXXXXXXPFXXXP--PXXPPPXKKXXPPPXXXKKKKXXP 812
           PP  PP  G    PP             P       P  PPP  +         KK+  P
Sbjct: 254 PPIPPPSNGTVSSPPNSPPRPIAPVSMNPAINSTSKPPLPPPSSRVSAAALAANKKRPPP 313

Query: 813 PPPXXKK 833
           PPP  ++
Sbjct: 314 PPPPSRR 320



 Score = 27.9 bits (59), Expect = 2.3
 Identities = 13/37 (35%), Positives = 13/37 (35%)
 Frame = -3

Query: 700 PPLFFXGGXFXXPPPGGXXGGXPPPPPXPXXXXXPPP 590
           PP     G    PP G      PPP   P     PPP
Sbjct: 342 PPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPP 378



 Score = 27.1 bits (57), Expect = 4.0
 Identities = 11/37 (29%), Positives = 15/37 (40%)
 Frame = +1

Query: 739 PPXXPPPXKKXXPPPXXXKKKXXAPPPXXKKKXXXPP 849
           PP  PP  +         KK+   PPP  ++    PP
Sbjct: 290 PPLPPPSSRVSAAALAANKKRPPPPPPPSRRNRGKPP 326



 Score = 27.1 bits (57), Expect = 4.0
 Identities = 12/28 (42%), Positives = 13/28 (46%), Gaps = 5/28 (17%)
 Frame = +1

Query: 514 PPPPEKKXXXXXXGXPP-----PPPPPP 582
           PPPP +         PP     PPPPPP
Sbjct: 339 PPPPPRSNAAGSIPLPPQGRSAPPPPPP 366



 Score = 26.2 bits (55), Expect = 7.0
 Identities = 13/42 (30%), Positives = 17/42 (40%), Gaps = 8/42 (19%)
 Frame = +1

Query: 496 EKKXXXPPPPEKKXXXXXX--------GXPPPPPPPPXXXGG 597
           +K+   PPPP ++                PPPPPPP     G
Sbjct: 308 KKRPPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAG 349



 Score = 26.2 bits (55), Expect = 7.0
 Identities = 11/30 (36%), Positives = 13/30 (43%), Gaps = 2/30 (6%)
 Frame = +3

Query: 738 PPXXPPPXKKXX--PPPXXXKKKKXXPPPP 821
           PP  PPP ++    PP          PPPP
Sbjct: 311 PPPPPPPSRRNRGKPPIGNGSSNSSLPPPP 340



 Score = 26.2 bits (55), Expect(2) = 0.40
 Identities = 9/15 (60%), Positives = 9/15 (60%)
 Frame = +1

Query: 559 PPPPPPPPXXXGGXP 603
           PPPPPPP     G P
Sbjct: 311 PPPPPPPSRRNRGKP 325



 Score = 22.6 bits (46), Expect(2) = 0.40
 Identities = 9/27 (33%), Positives = 10/27 (37%)
 Frame = +1

Query: 502 KXXXPPPPEKKXXXXXXGXPPPPPPPP 582
           K   PPP  +            PPPPP
Sbjct: 289 KPPLPPPSSRVSAAALAANKKRPPPPP 315


>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
           Spp42|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 2363

 Score = 31.1 bits (67), Expect = 0.25
 Identities = 11/22 (50%), Positives = 11/22 (50%)
 Frame = +1

Query: 514 PPPPEKKXXXXXXGXPPPPPPP 579
           PPPP           PPPPPPP
Sbjct: 9   PPPPPPPPGFEPPSQPPPPPPP 30



 Score = 28.7 bits (61), Expect = 1.3
 Identities = 9/10 (90%), Positives = 9/10 (90%)
 Frame = +1

Query: 553 GXPPPPPPPP 582
           G PPPPPPPP
Sbjct: 7   GNPPPPPPPP 16



 Score = 28.3 bits (60), Expect = 1.7
 Identities = 10/17 (58%), Positives = 10/17 (58%)
 Frame = -3

Query: 664 PPPGGXXGGXPPPPPXP 614
           PPPG      PPPPP P
Sbjct: 14  PPPGFEPPSQPPPPPPP 30



 Score = 27.9 bits (59), Expect = 2.3
 Identities = 12/28 (42%), Positives = 13/28 (46%)
 Frame = +3

Query: 738 PPXXPPPXKKXXPPPXXXKKKKXXPPPP 821
           PP  PPP     PPP      +  PPPP
Sbjct: 5   PPGNPPPPP---PPPGFEPPSQPPPPPP 29



 Score = 27.5 bits (58), Expect = 3.0
 Identities = 11/23 (47%), Positives = 11/23 (47%)
 Frame = -2

Query: 482 PPPPPXPPXP*KKKXXPPPXXGG 414
           PPPPP PP        PPP   G
Sbjct: 9   PPPPPPPPGFEPPSQPPPPPPPG 31



 Score = 27.1 bits (57), Expect = 4.0
 Identities = 10/22 (45%), Positives = 10/22 (45%)
 Frame = +1

Query: 517 PPPEKKXXXXXXGXPPPPPPPP 582
           PPP            PPPPPPP
Sbjct: 9   PPPPPPPPGFEPPSQPPPPPPP 30



 Score = 27.1 bits (57), Expect = 4.0
 Identities = 11/24 (45%), Positives = 12/24 (50%)
 Frame = -2

Query: 482 PPPPPXPPXP*KKKXXPPPXXGGV 411
           PPPPP P      +  PPP  G V
Sbjct: 10  PPPPPPPGFEPPSQPPPPPPPGYV 33


>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 273

 Score = 29.9 bits (64), Expect = 0.57
 Identities = 27/80 (33%), Positives = 27/80 (33%), Gaps = 1/80 (1%)
 Frame = -2

Query: 974 GGXXXXXXXGFXXXGXXGGFFFXGXXXXXFFXXGGGPPXFFXGGXXFFFXXWGGGAXFFF 795
           GG       G    G  GGF   G         GGGP  F  G   F     G G     
Sbjct: 194 GGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGG 253

Query: 794 FXXXGGGXXFFXGG-GXXGG 738
           F   GGG   F GG G  GG
Sbjct: 254 F---GGGPGGFGGGPGGHGG 270



 Score = 26.6 bits (56), Expect = 5.3
 Identities = 12/23 (52%), Positives = 12/23 (52%)
 Frame = +1

Query: 415 PPXXGGGXXFFFXGXGGXGGGGG 483
           P   GGG   F  G GG GGG G
Sbjct: 237 PGGFGGGPGGFGGGLGGFGGGPG 259



 Score = 26.6 bits (56), Expect = 5.3
 Identities = 12/23 (52%), Positives = 12/23 (52%)
 Frame = +1

Query: 415 PPXXGGGXXFFFXGXGGXGGGGG 483
           P   GGG   F  G GG GGG G
Sbjct: 244 PGGFGGGLGGFGGGPGGFGGGPG 266



 Score = 26.2 bits (55), Expect = 7.0
 Identities = 13/25 (52%), Positives = 13/25 (52%)
 Frame = +3

Query: 591 GGGXXXXXGXGGGGGXPPXXPPGGG 665
           GGG     G GGG G PP  P G G
Sbjct: 187 GGGFG---GFGGGSGGPPPGPGGFG 208


>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1611

 Score = 29.9 bits (64), Expect = 0.57
 Identities = 20/82 (24%), Positives = 20/82 (24%), Gaps = 3/82 (3%)
 Frame = +1

Query: 739  PPXXPPPXKKXXPPPXXXKKKXXAP---PPXXKKKXXXPPXKKXGGPPPXXKKXXXXXPX 909
            PP   P      P P         P   PP  K     PP     G PP  K      P 
Sbjct: 1112 PPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPV 1171

Query: 910  KKXPPXXPXXXXPXXXXXXXPP 975
                   P    P       PP
Sbjct: 1172 PAPSSGIPPVPKPAAGVPPVPP 1193



 Score = 27.5 bits (58), Expect = 3.0
 Identities = 17/56 (30%), Positives = 17/56 (30%)
 Frame = +1

Query: 739  PPXXPPPXKKXXPPPXXXKKKXXAPPPXXKKKXXXPPXKKXGGPPPXXKKXXXXXP 906
            P   PP       PP    K   A PP  K     PP     G PP  K      P
Sbjct: 1079 PSGAPPVPAPSGIPPVP--KPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPP 1132



 Score = 27.1 bits (57), Expect = 4.0
 Identities = 20/82 (24%), Positives = 20/82 (24%), Gaps = 3/82 (3%)
 Frame = +1

Query: 739  PPXXPPPXKKXXPPPXXXKKKXXAP---PPXXKKKXXXPPXKKXGGPPPXXKKXXXXXPX 909
            PP   P      P P        AP   PP  K     PP        P   K     P 
Sbjct: 1131 PPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPP 1190

Query: 910  KKXPPXXPXXXXPXXXXXXXPP 975
               P   P    P       PP
Sbjct: 1191 VPPPSEAPPVPKPSVGVPPVPP 1212


>SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein
           Cap1|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 551

 Score = 28.7 bits (61), Expect = 1.3
 Identities = 9/10 (90%), Positives = 9/10 (90%)
 Frame = +1

Query: 553 GXPPPPPPPP 582
           G PPPPPPPP
Sbjct: 304 GLPPPPPPPP 313



 Score = 26.6 bits (56), Expect = 5.3
 Identities = 8/8 (100%), Positives = 8/8 (100%)
 Frame = +1

Query: 559 PPPPPPPP 582
           PPPPPPPP
Sbjct: 307 PPPPPPPP 314


>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 309

 Score = 27.9 bits (59), Expect = 2.3
 Identities = 13/45 (28%), Positives = 14/45 (31%)
 Frame = +1

Query: 742 PXXPPPXKKXXPPPXXXKKKXXAPPPXXKKKXXXPPXKKXGGPPP 876
           P   PP     PPP        +PP         PP      PPP
Sbjct: 161 PSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPPP 205


>SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr
            2|||Manual
          Length = 1217

 Score = 27.5 bits (58), Expect = 3.0
 Identities = 10/23 (43%), Positives = 10/23 (43%)
 Frame = +1

Query: 514  PPPPEKKXXXXXXGXPPPPPPPP 582
            P  P           PPPPPPPP
Sbjct: 1080 PSAPVANNVSKPSAVPPPPPPPP 1102



 Score = 26.6 bits (56), Expect = 5.3
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = -1

Query: 483  PPPPPXPPXXXKKK 442
            PPPPP PP   +KK
Sbjct: 1095 PPPPPPPPAEVEKK 1108


>SPBC557.04 |ppk29||Ark1/Prk1 family protein kinase
           Ppk29|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 872

 Score = 23.0 bits (47), Expect(2) = 3.9
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = +1

Query: 559 PPPPPPPP 582
           PPPPPP P
Sbjct: 356 PPPPPPMP 363



 Score = 22.2 bits (45), Expect(2) = 3.9
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = +1

Query: 553 GXPPPPPPP 579
           G  PPPPPP
Sbjct: 353 GSRPPPPPP 361


>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
            hand and WH2 motif |Schizosaccharomyces pombe|chr
            1|||Manual
          Length = 1794

 Score = 27.1 bits (57), Expect = 4.0
 Identities = 10/19 (52%), Positives = 10/19 (52%)
 Frame = -2

Query: 482  PPPPPXPPXP*KKKXXPPP 426
            PPPP  PP P      PPP
Sbjct: 1715 PPPPSAPPMPAGPPSAPPP 1733


>SPBC13E7.03c |||RNA hairpin binding protein |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 713

 Score = 27.1 bits (57), Expect = 4.0
 Identities = 9/15 (60%), Positives = 9/15 (60%)
 Frame = +1

Query: 559 PPPPPPPPXXXGGXP 603
           PPPPPPPP      P
Sbjct: 370 PPPPPPPPELLNHSP 384


>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
           Y|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1002

 Score = 26.6 bits (56), Expect = 5.3
 Identities = 10/28 (35%), Positives = 13/28 (46%)
 Frame = +3

Query: 738 PPXXPPPXKKXXPPPXXXKKKKXXPPPP 821
           PP    P +   PPP   +  +  PPPP
Sbjct: 210 PPMHHKPGEHMPPPPMHHEPGEHMPPPP 237



 Score = 26.6 bits (56), Expect = 5.3
 Identities = 10/28 (35%), Positives = 13/28 (46%)
 Frame = +3

Query: 738 PPXXPPPXKKXXPPPXXXKKKKXXPPPP 821
           PP    P +   PPP   +  +  PPPP
Sbjct: 223 PPMHHEPGEHMPPPPMHHEPGEHMPPPP 250



 Score = 26.6 bits (56), Expect = 5.3
 Identities = 10/28 (35%), Positives = 13/28 (46%)
 Frame = +3

Query: 738 PPXXPPPXKKXXPPPXXXKKKKXXPPPP 821
           PP    P +   PPP   +  +  PPPP
Sbjct: 236 PPMHHEPGEHMPPPPMHHEPGEHMPPPP 263



 Score = 26.6 bits (56), Expect = 5.3
 Identities = 10/28 (35%), Positives = 13/28 (46%)
 Frame = +3

Query: 738 PPXXPPPXKKXXPPPXXXKKKKXXPPPP 821
           PP    P +   PPP   +  +  PPPP
Sbjct: 249 PPMHHEPGEHMPPPPMHHEPGEHMPPPP 276



 Score = 26.6 bits (56), Expect = 5.3
 Identities = 10/28 (35%), Positives = 13/28 (46%)
 Frame = +3

Query: 738 PPXXPPPXKKXXPPPXXXKKKKXXPPPP 821
           PP    P +   PPP   +  +  PPPP
Sbjct: 262 PPMHHEPGEHMPPPPMHHEPGEHMPPPP 289



 Score = 26.6 bits (56), Expect = 5.3
 Identities = 10/28 (35%), Positives = 13/28 (46%)
 Frame = +3

Query: 738 PPXXPPPXKKXXPPPXXXKKKKXXPPPP 821
           PP    P +   PPP   +  +  PPPP
Sbjct: 275 PPMHHEPGEHMPPPPMHHEPGEHMPPPP 302



 Score = 26.6 bits (56), Expect = 5.3
 Identities = 10/28 (35%), Positives = 13/28 (46%)
 Frame = +3

Query: 738 PPXXPPPXKKXXPPPXXXKKKKXXPPPP 821
           PP    P +   PPP   +  +  PPPP
Sbjct: 288 PPMHHEPGEHMPPPPMHHEPGEHMPPPP 315



 Score = 26.6 bits (56), Expect = 5.3
 Identities = 10/28 (35%), Positives = 13/28 (46%)
 Frame = +3

Query: 738 PPXXPPPXKKXXPPPXXXKKKKXXPPPP 821
           PP    P +   PPP   +  +  PPPP
Sbjct: 301 PPMHHEPGEHMPPPPMHHEPGEHMPPPP 328



 Score = 26.6 bits (56), Expect = 5.3
 Identities = 10/28 (35%), Positives = 13/28 (46%)
 Frame = +3

Query: 738 PPXXPPPXKKXXPPPXXXKKKKXXPPPP 821
           PP    P +   PPP   +  +  PPPP
Sbjct: 314 PPMHHEPGEHMPPPPMHHEPGEHMPPPP 341


>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1420

 Score = 26.6 bits (56), Expect = 5.3
 Identities = 8/8 (100%), Positives = 8/8 (100%)
 Frame = +1

Query: 559 PPPPPPPP 582
           PPPPPPPP
Sbjct: 189 PPPPPPPP 196



 Score = 26.6 bits (56), Expect = 5.3
 Identities = 8/8 (100%), Positives = 8/8 (100%)
 Frame = +1

Query: 559 PPPPPPPP 582
           PPPPPPPP
Sbjct: 190 PPPPPPPP 197


>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 1841

 Score = 26.6 bits (56), Expect = 5.3
 Identities = 8/8 (100%), Positives = 8/8 (100%)
 Frame = +1

Query: 559 PPPPPPPP 582
           PPPPPPPP
Sbjct: 945 PPPPPPPP 952



 Score = 26.6 bits (56), Expect = 5.3
 Identities = 8/8 (100%), Positives = 8/8 (100%)
 Frame = +1

Query: 559 PPPPPPPP 582
           PPPPPPPP
Sbjct: 946 PPPPPPPP 953


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.317    0.154    0.531 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,850,198
Number of Sequences: 5004
Number of extensions: 29337
Number of successful extensions: 333
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 216
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 501293686
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)

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