Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP04_F_C02
         (884 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    29   0.064
AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like prote...    27   0.26 
AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.         24   1.8  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   7.4  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 28.7 bits (61), Expect = 0.064
 Identities = 14/56 (25%), Positives = 25/56 (44%)
 Frame = +3

Query: 507 LLAVSLYNQIFDFHLTHIMSQICIEAKYFLRYASGCPFKILQL*SKMLXTMCVSYF 674
           LL +  +   F     H++  +CI   Y++     C F I  +   +L  +C+ YF
Sbjct: 235 LLCIYYFYYAFILFTVHLLLLVCIYYFYYMHLLFCCAFIIFTM--HLLFLLCIYYF 288



 Score = 21.4 bits (43), Expect = 9.7
 Identities = 10/18 (55%), Positives = 10/18 (55%)
 Frame = -3

Query: 108 C*SHFVFLFINFTTSLLF 55
           C  HF   FI FT  LLF
Sbjct: 165 CIYHFFCAFIIFTMHLLF 182


>AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like protein
           protein.
          Length = 314

 Score = 26.6 bits (56), Expect = 0.26
 Identities = 23/88 (26%), Positives = 36/88 (40%), Gaps = 8/88 (9%)
 Frame = +1

Query: 160 RPPGGGHTNIFDSEPE--PPRTGRRAVPPSAT------STFSHGQGDEPKATNGTSXSDQ 315
           R PGG H+     EPE    ++    VP S +      + FS GQ + P ++  +    Q
Sbjct: 16  RSPGGDHSENMQDEPENLSNKSNSITVPLSISTGQRLPANFSFGQVNSPPSSTSSGSLGQ 75

Query: 316 RSVYS*GESGATDSAGGPXLQQSALPKP 399
                   +   D A  P +  + LP+P
Sbjct: 76  FPA-----TPVIDPAKDPAIYSNLLPRP 98


>AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.
          Length = 247

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = +3

Query: 237 TKRNEHFQPRTRRRAESDQRH 299
           T+RN +++PRT R     ++H
Sbjct: 227 TRRNPYYRPRTSRTEPPRRKH 247


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 5/11 (45%), Positives = 7/11 (63%)
 Frame = -3

Query: 240  WWNGTASGPRW 208
            WW+ T + P W
Sbjct: 1042 WWSSTTTSPWW 1052


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 168,380
Number of Sequences: 336
Number of extensions: 3331
Number of successful extensions: 9
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24513621
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)