Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP04_F_C01
(876 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9; ... 229 5e-59
UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1; ... 130 5e-29
UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular organi... 95 2e-18
UniRef50_UPI00015C63F8 Cluster: hypothetical protein CKO_pCKO3p0... 78 3e-13
UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1; ... 75 2e-12
UniRef50_UPI00015C640B Cluster: hypothetical protein CKO_pCKO2p0... 64 3e-09
UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE... 50 8e-05
UniRef50_P03851 Cluster: Uncharacterized 9.4 kDa protein; n=11; ... 50 1e-04
UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3; ... 49 2e-04
UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1; ... 49 2e-04
UniRef50_P03845 Cluster: Putative uncharacterized protein 1; n=4... 40 0.11
UniRef50_Q8GUF1 Cluster: Reverse transcriptase; n=1; Cicer ariet... 39 0.19
UniRef50_P03023 Cluster: Lactose operon repressor; n=24; Enterob... 35 2.4
UniRef50_A3N6N0 Cluster: Putative uncharacterized protein; n=4; ... 35 3.1
UniRef50_UPI0000E1F625 Cluster: PREDICTED: hypothetical protein;... 34 4.1
UniRef50_Q8H468 Cluster: Putative uncharacterized protein P0470D... 34 4.1
UniRef50_P03846 Cluster: Putative uncharacterized protein 1; n=2... 34 4.1
UniRef50_Q69XT0 Cluster: Putative uncharacterized protein P0613F... 33 9.5
>UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9;
root|Rep: Putative uncharacterized protein - Salmonella
typhimurium
Length = 127
Score = 229 bits (561), Expect = 5e-59
Identities = 108/123 (87%), Positives = 109/123 (88%)
Frame = +2
Query: 497 AKGQETVKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRP 676
+K Q T R RFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRP
Sbjct: 2 SKKQSTGTSQRRCRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRP 61
Query: 677 CRLPDTCPPFSLREAWRFLIAHAVXISVRCXSFAPSWAVCTNPPFSPTXAPYPVTIVLSQ 856
CRLPDTCPPFSLREAWRFLIAHAV ISVRC SFAPSWAVCTNPPFSPT APYPVTIVLS
Sbjct: 62 CRLPDTCPPFSLREAWRFLIAHAVGISVRCRSFAPSWAVCTNPPFSPTAAPYPVTIVLSP 121
Query: 857 PGK 865
K
Sbjct: 122 TRK 124
>UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1;
Escherichia coli|Rep: Putative uncharacterized protein -
Escherichia coli
Length = 147
Score = 130 bits (314), Expect = 5e-29
Identities = 72/121 (59%), Positives = 80/121 (66%)
Frame = +2
Query: 326 RGAAVCVLGALPLPRSLTRCARSFGCGERYQLTQRR*YGYPQKSGDNAGKNM*SKRPAKG 505
R + +C G +PLPRSLTR ARSFGCGERY+LT D G + R
Sbjct: 26 RVSRICDTGDIPLPRSLTRYARSFGCGERYRLT------------DGDGNFLEDTRKTLS 73
Query: 506 QETVKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRPCRL 685
+E + RPR RFSIGSAPLTSI K DAQ+ GGETRQDYKD RRFPL APSCALLF P L
Sbjct: 74 KEEI-RPRRSRFSIGSAPLTSIAKSDAQISGGETRQDYKDPRRFPLVAPSCALLFLPFGL 132
Query: 686 P 688
P
Sbjct: 133 P 133
>UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular
organisms|Rep: Predicted protein - Nematostella
vectensis
Length = 97
Score = 95.1 bits (226), Expect = 2e-18
Identities = 45/54 (83%), Positives = 47/54 (87%)
Frame = +2
Query: 515 VKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRP 676
V+ PR RFSIGSAPLTSITK DAQ+ GGETRQDYKDTRRFPL APSCALLF P
Sbjct: 44 VRGPRQSRFSIGSAPLTSITKSDAQISGGETRQDYKDTRRFPLAAPSCALLFLP 97
>UniRef50_UPI00015C63F8 Cluster: hypothetical protein
CKO_pCKO3p06146; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO3p06146 -
Citrobacter koseri ATCC BAA-895
Length = 125
Score = 77.8 bits (183), Expect = 3e-13
Identities = 44/92 (47%), Positives = 47/92 (51%)
Frame = +2
Query: 590 VRGGETRQDYKDTRRFPLEAPSCALLFRPCRLPDTCPPFSLREAWRFLIAHAVXISVRCX 769
VR GETRQD K P P PPFSL + + IS RC
Sbjct: 23 VRSGETRQDLKIITVSDESLPLALSCSNPAVSRIPVPPFSLAGSVALSHSSHSGISARCR 82
Query: 770 SFAPSWAVCTNPPFSPTXAPYPVTIVLSQPGK 865
SFAPSWAV NPPFSPT APYPVT+ LS K
Sbjct: 83 SFAPSWAVSKNPPFSPTAAPYPVTVHLSPTRK 114
>UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 37
Score = 75.4 bits (177), Expect = 2e-12
Identities = 35/37 (94%), Positives = 36/37 (97%)
Frame = +1
Query: 655 VRSPVPTLPLTGYLSAFLPSGSVALSHSSRCXYLSSV 765
+RSPVPTLPLTGYLSAFLPSGSVALSHSSRC YLSSV
Sbjct: 1 MRSPVPTLPLTGYLSAFLPSGSVALSHSSRCRYLSSV 37
>UniRef50_UPI00015C640B Cluster: hypothetical protein
CKO_pCKO2p07168; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO2p07168 -
Citrobacter koseri ATCC BAA-895
Length = 99
Score = 64.5 bits (150), Expect = 3e-09
Identities = 35/74 (47%), Positives = 43/74 (58%)
Frame = -3
Query: 859 GLTQDDSYXXXXXXXXXXXXXAHSPAWSERXTPN*DTYSVSYEKAPRFPKGERRTGIR*A 680
G TQDDSY A+SPAWSER P+ DT SVSYEKAPRFPKG++ +
Sbjct: 9 GWTQDDSYRKGRSSRAERGVRAYSPAWSERPKPSRDTSSVSYEKAPRFPKGKKAEQV--- 65
Query: 679 AGSEQESARGSFQG 638
+G Q R + +G
Sbjct: 66 SGKRQGRNRRAHEG 79
Score = 48.8 bits (111), Expect = 2e-04
Identities = 25/40 (62%), Positives = 27/40 (67%)
Frame = -1
Query: 708 EKGGQVSGKRQGRNRRAHEGASRGKRLVSL*SCRVSPPLT 589
+K QVSGKRQGRNRRAHEGA+ K SL PPLT
Sbjct: 60 KKAEQVSGKRQGRNRRAHEGAAGEKSPASLSPVGFRPPLT 99
>UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE -
Myxococcus xanthus
Length = 486
Score = 50.0 bits (114), Expect = 8e-05
Identities = 29/54 (53%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = +2
Query: 302 CINASANARGAAVCVLGALPLPRSLTRCARSFGCGERYQL-TQRR*YGYPQKSG 460
CI A AR AV VL ALPL RS TRC RS GCG + R YG PQ G
Sbjct: 266 CIRDPATARSEAVWVLVALPLLRSRTRCVRSVGCGGAVSAHSPGRPYGDPQPQG 319
>UniRef50_P03851 Cluster: Uncharacterized 9.4 kDa protein; n=11;
cellular organisms|Rep: Uncharacterized 9.4 kDa protein
- Escherichia coli
Length = 84
Score = 49.6 bits (113), Expect = 1e-04
Identities = 20/21 (95%), Positives = 21/21 (100%)
Frame = +1
Query: 793 VHEPPVQPDRCALSGNYRLES 855
+HEPPVQPDRCALSGNYRLES
Sbjct: 1 MHEPPVQPDRCALSGNYRLES 21
>UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3;
root|Rep: Putative uncharacterized protein - Escherichia
coli
Length = 61
Score = 48.8 bits (111), Expect = 2e-04
Identities = 25/42 (59%), Positives = 28/42 (66%), Gaps = 5/42 (11%)
Frame = -3
Query: 499 CW--PFASHVLSC---VIP*FLWITVLPPLSELIPLAAAERP 389
CW P +L+C + P LWITVLPPLSEL PLAA ERP
Sbjct: 15 CWLLPVLCFLLTCSFRLYPLILWITVLPPLSELTPLAAVERP 56
>UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1;
Beggiatoa sp. SS|Rep: Putative uncharacterized protein -
Beggiatoa sp. SS
Length = 114
Score = 48.8 bits (111), Expect = 2e-04
Identities = 23/46 (50%), Positives = 31/46 (67%)
Frame = +2
Query: 539 FSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRP 676
F S PLT+ITKI Q + +T+ +YK T FPL++PS +LLF P
Sbjct: 69 FPYNSPPLTTITKIYPQFKNTQTQHNYKYTTPFPLQSPSYSLLFPP 114
>UniRef50_P03845 Cluster: Putative uncharacterized protein 1; n=4;
Bacteria|Rep: Putative uncharacterized protein 1 -
Escherichia coli
Length = 42
Score = 39.5 bits (88), Expect = 0.11
Identities = 19/34 (55%), Positives = 19/34 (55%)
Frame = -3
Query: 859 GLTQDDSYXXXXXXXXXXXXXAHSPAWSERXTPN 758
G TQDDSY AHSPAWSER TPN
Sbjct: 9 GWTQDDSYRIRRSGRAERGVRAHSPAWSERPTPN 42
>UniRef50_Q8GUF1 Cluster: Reverse transcriptase; n=1; Cicer
arietinum|Rep: Reverse transcriptase - Cicer arietinum
(Chickpea) (Garbanzo)
Length = 37
Score = 38.7 bits (86), Expect = 0.19
Identities = 16/17 (94%), Positives = 16/17 (94%)
Frame = +3
Query: 435 NTVIHRNQGITQERTCE 485
NTVIH NQGITQERTCE
Sbjct: 21 NTVIHXNQGITQERTCE 37
>UniRef50_P03023 Cluster: Lactose operon repressor; n=24;
Enterobacteriaceae|Rep: Lactose operon repressor -
Escherichia coli (strain K12)
Length = 360
Score = 35.1 bits (77), Expect = 2.4
Identities = 16/24 (66%), Positives = 20/24 (83%)
Frame = -1
Query: 372 ERGSGRAPKTQTAAPRALADALMQ 301
+R + AP TQTA+PRALAD+LMQ
Sbjct: 325 KRKTTLAPNTQTASPRALADSLMQ 348
>UniRef50_A3N6N0 Cluster: Putative uncharacterized protein; n=4;
Burkholderia|Rep: Putative uncharacterized protein -
Burkholderia pseudomallei (strain 668)
Length = 755
Score = 34.7 bits (76), Expect = 3.1
Identities = 16/35 (45%), Positives = 24/35 (68%)
Frame = -1
Query: 735 MRKRHASRREKGGQVSGKRQGRNRRAHEGASRGKR 631
+R+R A RR GG+ G+R+GRNR+ + RG+R
Sbjct: 355 VRRRAAPRRRHGGEWRGRRRGRNRKRRQ--QRGQR 387
>UniRef50_UPI0000E1F625 Cluster: PREDICTED: hypothetical protein;
n=1; Pan troglodytes|Rep: PREDICTED: hypothetical
protein - Pan troglodytes
Length = 567
Score = 34.3 bits (75), Expect = 4.1
Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
Frame = +1
Query: 487 QKASKRPGNRKKAALLAFFHRLRPPDEHHKNRRSSQRWRNPT---GL*RYQAFPP 642
Q AS PG + + A F PPD HH++ R + W + + + +AFPP
Sbjct: 153 QSASSGPGTKPRGVRPAPFADRGPPDRHHESSRGDKAWDSGSESPAQRKARAFPP 207
>UniRef50_Q8H468 Cluster: Putative uncharacterized protein
P0470D12.126; n=1; Oryza sativa (japonica
cultivar-group)|Rep: Putative uncharacterized protein
P0470D12.126 - Oryza sativa subsp. japonica (Rice)
Length = 281
Score = 34.3 bits (75), Expect = 4.1
Identities = 22/62 (35%), Positives = 29/62 (46%), Gaps = 3/62 (4%)
Frame = +1
Query: 505 PGNRKKAALLAFFHR--LRP-PDEHHKNRRSSQRWRNPTGL*RYQAFPPGSSLVRSPVPT 675
P + AA L HR RP P H + +++ WR PT +A PP S VR P
Sbjct: 71 PSRPRLAAPLLAGHRRAARPRPTAIHTSPATARSWRRPTSSCPRRAAPPSPSFVRITPPA 130
Query: 676 LP 681
+P
Sbjct: 131 MP 132
>UniRef50_P03846 Cluster: Putative uncharacterized protein 1; n=2;
cellular organisms|Rep: Putative uncharacterized protein
1 - Escherichia coli
Length = 47
Score = 34.3 bits (75), Expect = 4.1
Identities = 18/39 (46%), Positives = 21/39 (53%)
Frame = -3
Query: 865 FTGLTQDDSYXXXXXXXXXXXXXAHSPAWSERXTPN*DT 749
F G TQ +SY A+SPAWSER TP+ DT
Sbjct: 7 FPGWTQVNSYRIRRSSRAERGVLAYSPAWSERPTPSRDT 45
>UniRef50_Q69XT0 Cluster: Putative uncharacterized protein
P0613F06.39; n=1; Oryza sativa (japonica
cultivar-group)|Rep: Putative uncharacterized protein
P0613F06.39 - Oryza sativa subsp. japonica (Rice)
Length = 309
Score = 33.1 bits (72), Expect = 9.5
Identities = 29/85 (34%), Positives = 38/85 (44%)
Frame = +1
Query: 487 QKASKRPGNRKKAALLAFFHRLRPPDEHHKNRRSSQRWRNPTGL*RYQAFPPGSSLVRSP 666
Q S+R G R+ AAL R RPP RR + R R P+ R+ A P ++ V SP
Sbjct: 202 QPPSRRAGRRRPAALPPRGRR-RPPPSRRARRRPAFRPRAPSSSRRHAATAPPAAWV-SP 259
Query: 667 VPTLPLTGYLSAFLPSGSVALSHSS 741
P G + P+ A SS
Sbjct: 260 ATAPPPHGPPATAPPTVRAAGRRSS 284
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 647,687,935
Number of Sequences: 1657284
Number of extensions: 13648938
Number of successful extensions: 44108
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 41330
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 44046
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 78292544701
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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