Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP04_F_B24
         (887 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF457549-1|AAL68779.1|  257|Anopheles gambiae antigen 5-related ...    25   3.1  
DQ182013-1|ABA56305.1|   75|Anopheles gambiae G(alpha)c protein.       24   5.4  
M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.              24   7.1  

>AF457549-1|AAL68779.1|  257|Anopheles gambiae antigen 5-related 2
           protein protein.
          Length = 257

 Score = 25.0 bits (52), Expect = 3.1
 Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 3/42 (7%)
 Frame = +2

Query: 203 NHEKSCEVKMDRARNT---ARIQCRVCLEDFQTTTNVLSEPI 319
           N+ +SC+ + D  RNT   A     + L  F   TN +S+ I
Sbjct: 107 NNARSCQYQHDSCRNTPVYAWAGQNIALAQFSRMTNTISQLI 148


>DQ182013-1|ABA56305.1|   75|Anopheles gambiae G(alpha)c protein.
          Length = 75

 Score = 24.2 bits (50), Expect = 5.4
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = +2

Query: 482 YIDXFGQTTTXMQ*KKCFICEICDAIALFVT 574
           ++D  GQ T   +  KCF C +   + L  T
Sbjct: 13  FVDVGGQRTQRQKWTKCFDCSVTSILFLVST 43


>M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.
          Length = 613

 Score = 23.8 bits (49), Expect = 7.1
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +3

Query: 102 NQQQVWDVENQKGSHHQNER 161
           NQQ+ W  + Q+  H Q E+
Sbjct: 255 NQQREWQQQQQQQQHQQREQ 274


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 689,373
Number of Sequences: 2352
Number of extensions: 11105
Number of successful extensions: 25
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 95507181
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)